Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:47:55 (485877): wrapper (7.7.26015): starting
10:47:55 (485877): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 10:47:55] Arguments: --nthreads 8
[2026-01-26 10:47:55] Threads: 8
[2026-01-26 10:47:55] Checking for CVMFS
[2026-01-26 10:47:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 10:47:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 10:47:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 10:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 10:47:58] 2.13.0.0 159035 2607 53344 155556 3 188 5210727 6144001 11999 130560 0 11250889 99.998 94568 1298 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 10:47:58] CVMFS is ok
[2026-01-26 10:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 10:47:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 10:47:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 10:47:58] Further information can be found at the LHC@home message board.
[2026-01-26 10:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 10:47:58] Checking for apptainer binary...
[2026-01-26 10:47:58] apptainer is not installed, using version from CVMFS
[2026-01-26 10:47:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 10:47:58] mz32
[2026-01-26 10:47:58] apptainer works
[2026-01-26 10:47:58] Set ATHENA_PROC_NUMBER=8
[2026-01-26 10:47:58] Set ATHENA_CORE_NUMBER=8
[2026-01-26 10:47:58] Starting ATLAS job with PandaID=6982527755
[2026-01-26 10:47:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:26:03]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:26:03]  guid=a75e2df2-5ff1-4f02-aa44-4efae0f5c2c1
[2026-01-26 12:26:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 12:26:03]  is_altstaged=None
[2026-01-26 12:26:03]  is_tar=False
[2026-01-26 12:26:03]  lfn=log.48310826._008656.job.log.tgz.1
[2026-01-26 12:26:03]  mtime=0
[2026-01-26 12:26:03]  protocol_id=None
[2026-01-26 12:26:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 12:26:03]  replicas=None
[2026-01-26 12:26:03]  scope=mc23_13p6TeV
[2026-01-26 12:26:03]  status=None
[2026-01-26 12:26:03]  status_code=0
[2026-01-26 12:26:03]  storage_token=
[2026-01-26 12:26:03]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6982527755/log.48310826._008656.job.log.tgz.1
[2026-01-26 12:26:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/71/log.48310826._008656.job.log.tgz.1
[2026-01-26 12:26:03]  workdir=None
[2026-01-26 12:26:03] ]
[2026-01-26 12:26:03] 2026-01-26 20:25:25,757 | INFO     | transferring file log.48310826._008656.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6982527755/log.48310826._008656.job.log.tgz.1 to /var/lib/boin
[2026-01-26 12:26:03] 2026-01-26 20:25:25,758 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6982527755/log.48310826._008656.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4831
[2026-01-26 12:26:03] 2026-01-26 20:25:25,783 | INFO     | adding to output.list: log.48310826._008656.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/71/log.48310826._008656.job.log.tg
[2026-01-26 12:26:03] 2026-01-26 20:25:25,784 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 12:26:03] 2026-01-26 20:25:25,784 | INFO     | summary of transferred files:
[2026-01-26 12:26:03] 2026-01-26 20:25:25,784 | INFO     |  -- lfn=log.48310826._008656.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 12:26:03] 2026-01-26 20:25:25,784 | INFO     | stage-out finished correctly
[2026-01-26 12:26:03] 2026-01-26 20:25:25,899 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 12:26:03] 2026-01-26 20:25:25,991 | INFO     | time since job start (5820s) is within the limit (349056.0s)
[2026-01-26 12:26:03] 2026-01-26 20:25:26,171 | INFO     | monitor loop #414: job 0:6982527755 is in state 'finished'
[2026-01-26 12:26:03] 2026-01-26 20:25:26,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,010 | INFO     | time since job start (5823s) is within the limit (349056.0s)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,165 | INFO     | job 6982527755 has state=finished
[2026-01-26 12:26:03] 2026-01-26 20:25:28,165 | INFO     | preparing for final server update for job 6982527755 in state='finished'
[2026-01-26 12:26:03] 2026-01-26 20:25:28,165 | INFO     | reading metadata from: /var/lib/boinc-client/slots/13/PanDA_Pilot-6982527755/jobReport.json
[2026-01-26 12:26:03] 2026-01-26 20:25:28,168 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/13/workernode_map.json
[2026-01-26 12:26:03] 2026-01-26 20:25:28,169 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,169 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,169 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:26:03] 2026-01-26 20:25:28,169 | INFO     | job 6982527755 has finished - writing final server update
[2026-01-26 12:26:03] 2026-01-26 20:25:28,169 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,200 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6982527755/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,200 | INFO     | extracted standard info from prmon json
[2026-01-26 12:26:03] 2026-01-26 20:25:28,201 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:26:03] 2026-01-26 20:25:28,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:26:03] 2026-01-26 20:25:28,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:26:03] 2026-01-26 20:25:28,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:26:03] 2026-01-26 20:25:28,204 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:26:03] 2026-01-26 20:25:28,204 | INFO     | sum of square deviations: 211285822.0
[2026-01-26 12:26:03] 2026-01-26 20:25:28,205 | INFO     | sum of deviations: 506402876.4999999
[2026-01-26 12:26:03] 2026-01-26 20:25:28,205 | INFO     | mean x: 1769456290.5
[2026-01-26 12:26:03] 2026-01-26 20:25:28,205 | INFO     | mean y: 2496674.9431818184
[2026-01-26 12:26:03] 2026-01-26 20:25:28,205 | INFO     | intersect: -4238477692.708517
[2026-01-26 12:26:03] 2026-01-26 20:25:28,205 | INFO     | chi2: 0.0324000862158699
[2026-01-26 12:26:03] 2026-01-26 20:25:28,206 | INFO     | current memory leak: 2.40 B/s (using 88 data points, chi2=0.03)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,206 | INFO     | could have reported an average CPU frequency of 1984 MHz (7 samples)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,206 | INFO     | ..............................
[2026-01-26 12:26:03] 2026-01-26 20:25:28,206 | INFO     | . Timing measurements:
[2026-01-26 12:26:03] 2026-01-26 20:25:28,206 | INFO     | . get job = 0 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . initial setup = 9 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . payload setup = 8 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . stage-in = 0 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . payload execution = 5793 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . stage-out = 1 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | . log creation = 0 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,207 | INFO     | ..............................
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | 
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | job summary report
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | --------------------------------------------------
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | PanDA job id: 6982527755
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | task id: 48310826
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | errors: (none)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,558 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | pilot state: finished 
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | transexitcode: 0
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | exeerrorcode: 0
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | exeerrordiag: 
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | exitcode: 0
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | exitmsg: OK
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | cpuconsumptiontime: 42953 s
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | nevents: 400
[2026-01-26 12:26:03] 2026-01-26 20:25:28,559 | INFO     | neventsw: 0
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | pid: 495550
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | pgrp: 495550
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | corecount: 8
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | event service: False
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | sizes: {0: 2283816, 1: 2284277, 12: 2284277, 5805: 2310932, 5806: 2310931, 5808: 2320185, 5811: 2320323}
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | --------------------------------------------------
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | 
[2026-01-26 12:26:03] 2026-01-26 20:25:28,560 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-01-26 12:26:03] 2026-01-26 20:25:28,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,591 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,591 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:26:03] 2026-01-26 20:25:28,596 | INFO     | job 6982527755 has completed (purged errors)
[2026-01-26 12:26:03] 2026-01-26 20:25:28,596 | INFO     | overall cleanup function is called
[2026-01-26 12:26:03] 2026-01-26 20:25:29,605 | INFO     | --- collectZombieJob: --- 10, [495550]
[2026-01-26 12:26:03] 2026-01-26 20:25:29,605 | INFO     | zombie collector waiting for pid 495550
[2026-01-26 12:26:03] 2026-01-26 20:25:29,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:26:03] 2026-01-26 20:25:29,606 | INFO     | collected zombie processes
[2026-01-26 12:26:03] 2026-01-26 20:25:29,606 | INFO     | will attempt to kill all subprocesses of pid=495550
[2026-01-26 12:26:03] 2026-01-26 20:25:30,031 | INFO     | PID=490476 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 12:26:03] 2026-01-26 20:25:30,032 | INFO     | .. there are 15 such processes running
[2026-01-26 12:26:03] 2026-01-26 20:25:30,489 | INFO     | process IDs to be killed: [495550] (in reverse order)
[2026-01-26 12:26:03] 2026-01-26 20:25:30,720 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:26:03] 2026-01-26 20:25:30,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:26:03] 2026-01-26 20:25:30,739 | INFO     | did not find any defunct processes belonging to 495550
[2026-01-26 12:26:03] 2026-01-26 20:25:30,754 | INFO     | did not find any defunct processes belonging to 495550
[2026-01-26 12:26:03] 2026-01-26 20:25:30,754 | INFO     | ready for new job
[2026-01-26 12:26:03] 2026-01-26 20:25:30,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:26:03] 2026-01-26 20:25:30,757 | INFO     | **************************************
[2026-01-26 12:26:03] 2026-01-26 20:25:30,757 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:26:03] 2026-01-26 20:25:30,757 | INFO     | **************************************
[2026-01-26 12:26:03] 2026-01-26 20:25:30,757 | INFO     | 
[2026-01-26 12:26:03] 2026-01-26 20:25:30,767 | INFO     | architecture information:
[2026-01-26 12:26:03] 2026-01-26 20:25:30,767 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:26:03] 2026-01-26 20:25:30,792 | INFO     | cat /etc/os-release:
[2026-01-26 12:26:03] NAME="CentOS Linux"
[2026-01-26 12:26:03] VERSION="7 (Core)"
[2026-01-26 12:26:03] ID="centos"
[2026-01-26 12:26:03] ID_LIKE="rhel fedora"
[2026-01-26 12:26:03] VERSION_ID="7"
[2026-01-26 12:26:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:26:03] ANSI_COLOR="0;31"
[2026-01-26 12:26:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:26:03] HOME_URL="https://www.centos.org/"
[2026-01-26 12:26:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:26:03] 
[2026-01-26 12:26:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:26:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:26:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:26:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:26:03] 
[2026-01-26 12:26:03] 2026-01-26 20:25:30,793 | INFO     | **************************************
[2026-01-26 12:26:03] 2026-01-26 20:25:31,296 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-01-26 12:26:03] 2026-01-26 20:25:31,324 | INFO     | sufficient remaining disk space (371964510208 B)
[2026-01-26 12:26:03] 2026-01-26 20:25:31,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:26:03] 2026-01-26 20:25:31,325 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:26:03] 2026-01-26 20:25:31,325 | INFO     | update_server=False
[2026-01-26 12:26:03] 2026-01-26 20:25:31,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:26:03] 2026-01-26 20:25:31,363 | INFO     | all payload control threads have been joined
[2026-01-26 12:26:03] 2026-01-26 20:25:31,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:26:03] 2026-01-26 20:25:32,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:26:03] 2026-01-26 20:25:32,173 | INFO     | all data control threads have been joined
[2026-01-26 12:26:03] 2026-01-26 20:25:32,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:26:03] 2026-01-26 20:25:32,187 | INFO     | aborting loop
[2026-01-26 12:26:03] 2026-01-26 20:25:32,330 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:32,340 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:32,367 | INFO     | [payload] control thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:32,549 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:32,760 | INFO     | [job] validate thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:32,949 | INFO     | all job control threads have been joined
[2026-01-26 12:26:03] 2026-01-26 20:25:33,108 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,121 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,178 | INFO     | [data] control thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,191 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,253 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,337 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:26:03] 2026-01-26 20:25:33,411 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,829 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:33,955 | INFO     | [job] control thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:34,343 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:34,515 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:26:03] 2026-01-26 20:25:36,029 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:26:03] 2026-01-26 20:25:37,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129912208787264)>', '<ExcThread(monitor, started 129911125690112)>']
[2026-01-26 12:26:03] 2026-01-26 20:25:42,614 | INFO     | all workflow threads have been joined
[2026-01-26 12:26:03] 2026-01-26 20:25:42,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:26:03] 2026-01-26 20:25:42,615 | INFO     | traces error code: 0
[2026-01-26 12:26:03] 2026-01-26 20:25:42,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:26:03] 2026-01-26 20:26:02,931 | INFO     | PID=490476 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 12:26:03] 2026-01-26 20:26:02,931 | INFO     | .. there are 15 such processes running
[2026-01-26 12:26:03] 2026-01-26 20:26:02,932 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:26:03] 2026-01-26 20:26:02,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:26:03] 2026-01-26 20:26:02,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:26:03] 2026-01-26 20:26:02,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:26:03] 2026-01-26 20:26:02,933 | INFO     | [monitor] control thread has ended
[2026-01-26 12:26:03] 2026-01-26 20:26:03,074 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:26:03] 2026-01-26 20:26:03,079 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:26:03] 2026-01-26 20:26:03,083 [wrapper] pilotpid: 490476
[2026-01-26 12:26:03] 2026-01-26 20:26:03,088 [wrapper] Pilot exit status: 0
[2026-01-26 12:26:03] 2026-01-26 20:26:03,103 [wrapper] pandaids: 6982527755
[2026-01-26 12:26:03] 2026-01-26 20:26:03,237 [wrapper] cleanup supervisor_pilot  680501 490477
[2026-01-26 12:26:03] 2026-01-26 20:26:03,242 [wrapper] Test setup, not cleaning
[2026-01-26 12:26:03] 2026-01-26 20:26:03,246 [wrapper] apfmon messages muted
[2026-01-26 12:26:03] 2026-01-26 20:26:03,250 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:26:03] 2026-01-26 20:26:03,253 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:26:03]  *** Error codes and diagnostics ***
[2026-01-26 12:26:03]     "exeErrorCode": 0,
[2026-01-26 12:26:03]     "exeErrorDiag": "",
[2026-01-26 12:26:03]     "pilotErrorCode": 0,
[2026-01-26 12:26:03]     "pilotErrorDiag": "",
[2026-01-26 12:26:03]  *** Listing of results directory ***
[2026-01-26 12:26:03] total 659872
[2026-01-26 12:26:03] -rwx------ 1 boinc boinc     36322 Jan 24 21:14 runpilot2-wrapper.sh
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc      5111 Jan 24 21:15 queuedata.json
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc    584422 Jan 24 21:15 pilot3.tar.gz
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc       100 Jan 26 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:26:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 10:47 run_atlas
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc       105 Jan 26 10:47 job.xml
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc 488868460 Jan 26 10:47 EVNT.48310824._000092.pool.root.1
[2026-01-26 12:26:03] drwxrwx--x 2 boinc boinc      4096 Jan 26 10:47 shared
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc    597759 Jan 26 10:47 input.tar.gz
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 10:47 start_atlas.sh
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc         0 Jan 26 10:47 boinc_setup_complete
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc      9894 Jan 26 10:47 init_data.xml
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc         0 Jan 26 10:47 boinc_lockfile
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc      2523 Jan 26 10:47 pandaJob.out
[2026-01-26 12:26:03] -rw------- 1 boinc boinc   1006384 Jan 26 10:48 agis_schedconf.cvmfs.json
[2026-01-26 12:26:03] -rw------- 1 boinc boinc   1516246 Jan 26 10:48 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:26:03] -rw------- 1 boinc boinc       414 Jan 26 10:48 workernode_map.json
[2026-01-26 12:26:03] drwx------ 5 boinc boinc      4096 Jan 26 10:48 pilot3
[2026-01-26 12:26:03] -rw------- 1 boinc boinc 180553393 Jan 26 12:24 HITS.48310826._008656.pool.root.1
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc       530 Jan 26 12:25 boinc_task_state.xml
[2026-01-26 12:26:03] -rw------- 1 boinc boinc      1024 Jan 26 12:25 memory_monitor_summary.json
[2026-01-26 12:26:03] -rw------- 1 boinc boinc    340335 Jan 26 12:25 log.48310826._008656.job.log.tgz.1
[2026-01-26 12:26:03] -rw------- 1 boinc boinc      6255 Jan 26 12:25 heartbeat.json
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc        27 Jan 26 12:25 wrapper_checkpoint.txt
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc      8192 Jan 26 12:25 boinc_mmap_file
[2026-01-26 12:26:03] -rw------- 1 boinc boinc        95 Jan 26 12:26 pilot_heartbeat.json
[2026-01-26 12:26:03] -rw------- 1 boinc boinc       822 Jan 26 12:26 pilotlog.txt
[2026-01-26 12:26:03] -rw------- 1 boinc boinc    833475 Jan 26 12:26 log.48310826._008656.job.log.1
[2026-01-26 12:26:03] -rw------- 1 boinc boinc       357 Jan 26 12:26 output.list
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc       620 Jan 26 12:26 runtime_log
[2026-01-26 12:26:03] -rw------- 1 boinc boinc   1187840 Jan 26 12:26 result.tar.gz
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc      8913 Jan 26 12:26 runtime_log.err
[2026-01-26 12:26:03] -rw------- 1 boinc boinc       652 Jan 26 12:26 liYNDm4c738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5k6KDmGZjADn.diag
[2026-01-26 12:26:03] -rw-r--r-- 1 boinc boinc     21587 Jan 26 12:26 stderr.txt
[2026-01-26 12:26:03] HITS file was successfully produced:
[2026-01-26 12:26:03] -rw------- 1 boinc boinc 180553393 Jan 26 12:24 shared/HITS.pool.root.1
[2026-01-26 12:26:03]  *** Contents of shared directory: ***
[2026-01-26 12:26:03] total 655504
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc 488868460 Jan 26 10:47 ATLAS.root_0
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc    597759 Jan 26 10:47 input.tar.gz
[2026-01-26 12:26:03] -rw-r--r-- 2 boinc boinc     15845 Jan 26 10:47 start_atlas.sh
[2026-01-26 12:26:03] -rw------- 1 boinc boinc 180553393 Jan 26 12:24 HITS.pool.root.1
[2026-01-26 12:26:03] -rw------- 1 boinc boinc   1187840 Jan 26 12:26 result.tar.gz
12:26:05 (485877): run_atlas exited; CPU time 43270.891930
12:26:05 (485877): called boinc_finish(0)

</stderr_txt>
]]>

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