Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:58:00 (152816): wrapper (7.7.26015): starting
19:58:00 (152816): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 19:58:00] Arguments: --nthreads 4
[2026-01-26 19:58:00] Threads: 4
[2026-01-26 19:58:00] Checking for CVMFS
[2026-01-26 19:58:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:58:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:58:01] 2.13.1.0 4237 381 56932 155556 3 188 8854054 10240000 1822 130560 0 387176 99.992 16248 510 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 19:58:01] CVMFS is ok
[2026-01-26 19:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:58:01] Checking for apptainer binary...
[2026-01-26 19:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:58:01] Running /usr/bin/apptainer --version
[2026-01-26 19:58:01] apptainer version 1.4.5
[2026-01-26 19:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:58:01] woolyvlneu
[2026-01-26 19:58:01] apptainer works
[2026-01-26 19:58:01] Set ATHENA_PROC_NUMBER=4
[2026-01-26 19:58:01] Set ATHENA_CORE_NUMBER=4
[2026-01-26 19:58:01] Starting ATLAS job with PandaID=6983773287
[2026-01-26 19:58:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:17:27]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:17:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 21:17:27]  is_altstaged=None
[2026-01-26 21:17:27]  is_tar=False
[2026-01-26 21:17:27]  lfn=log.48317872._002064.job.log.tgz.1
[2026-01-26 21:17:27]  mtime=0
[2026-01-26 21:17:27]  protocol_id=None
[2026-01-26 21:17:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:17:27]  replicas=None
[2026-01-26 21:17:27]  scope=mc23_13p6TeV
[2026-01-26 21:17:27]  status=None
[2026-01-26 21:17:27]  status_code=0
[2026-01-26 21:17:27]  storage_token=
[2026-01-26 21:17:27]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983773287/log.48317872._002064.job.log.tgz.1
[2026-01-26 21:17:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/9a/log.48317872._002064.job.log.tgz.1
[2026-01-26 21:17:27]  workdir=None
[2026-01-26 21:17:27] ]
[2026-01-26 21:17:27] 2026-01-26 20:16:39,238 | INFO     | transferring file log.48317872._002064.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983773287/log.48317872._002064.job.log.tgz.1 to /var/li
[2026-01-26 21:17:27] 2026-01-26 20:16:39,238 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983773287/log.48317872._002064.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-26 21:17:27] 2026-01-26 20:16:39,257 | INFO     | adding to output.list: log.48317872._002064.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/9a/log.48317872._002064.job.log.tg
[2026-01-26 21:17:27] 2026-01-26 20:16:39,258 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:17:27] 2026-01-26 20:16:39,258 | INFO     | summary of transferred files:
[2026-01-26 21:17:27] 2026-01-26 20:16:39,258 | INFO     |  -- lfn=log.48317872._002064.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:17:27] 2026-01-26 20:16:39,258 | INFO     | stage-out finished correctly
[2026-01-26 21:17:27] 2026-01-26 20:16:39,280 | INFO     | time since job start (4704s) is within the limit (349056.0s)
[2026-01-26 21:17:27] 2026-01-26 20:16:40,245 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:17:27] 2026-01-26 20:16:41,286 | INFO     | time since job start (4706s) is within the limit (349056.0s)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,340 | INFO     | monitor loop #362: job 0:6983773287 is in state 'finished'
[2026-01-26 21:17:27] 2026-01-26 20:16:41,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,371 | INFO     | job 6983773287 has state=finished
[2026-01-26 21:17:27] 2026-01-26 20:16:41,371 | INFO     | preparing for final server update for job 6983773287 in state='finished'
[2026-01-26 21:17:27] 2026-01-26 20:16:41,371 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983773287/jobReport.json
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | job 6983773287 has finished - writing final server update
[2026-01-26 21:17:27] 2026-01-26 20:16:41,373 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,375 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983773287/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,375 | INFO     | extracted standard info from prmon json
[2026-01-26 21:17:27] 2026-01-26 20:16:41,375 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:17:27] 2026-01-26 20:16:41,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:17:27] 2026-01-26 20:16:41,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:17:27] 2026-01-26 20:16:41,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:17:27] 2026-01-26 20:16:41,376 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:17:27] 2026-01-26 20:16:41,376 | INFO     | sum of square deviations: 106336877.5
[2026-01-26 21:17:27] 2026-01-26 20:16:41,376 | INFO     | sum of deviations: -1252010421.0
[2026-01-26 21:17:27] 2026-01-26 20:16:41,376 | INFO     | mean x: 1769456325.5
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | mean y: 2327447.4857142856
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | intersect: 20835906645.166855
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | chi2: 0.011434035616132609
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | current memory leak: -11.77 B/s (using 70 data points, chi2=0.01)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | ..............................
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . Timing measurements:
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . get job = 0 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . initial setup = 5 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . payload setup = 5 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . stage-in = 0 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . payload execution = 4683 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . stage-out = 0 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | . log creation = 0 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,377 | INFO     | ..............................
[2026-01-26 21:17:27] 2026-01-26 20:16:41,409 | INFO     | 
[2026-01-26 21:17:27] 2026-01-26 20:16:41,409 | INFO     | job summary report
[2026-01-26 21:17:27] 2026-01-26 20:16:41,409 | INFO     | --------------------------------------------------
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | PanDA job id: 6983773287
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | task id: 48317872
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | errors: (none)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | pilot state: finished 
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | transexitcode: 0
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | exeerrorcode: 0
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | exeerrordiag: 
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | exitcode: 0
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | exitmsg: OK
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | cpuconsumptiontime: 17753 s
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | nevents: 400
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | neventsw: 0
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | pid: 161358
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | pgrp: 161358
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | corecount: 4
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | event service: False
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | sizes: {0: 2284242, 11: 2284242, 4692: 2310560, 4693: 2319586, 4694: 2319642, 4695: 2319836}
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | --------------------------------------------------
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | 
[2026-01-26 21:17:27] 2026-01-26 20:16:41,410 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | job 6983773287 has completed (purged errors)
[2026-01-26 21:17:27] 2026-01-26 20:16:41,428 | INFO     | overall cleanup function is called
[2026-01-26 21:17:27] 2026-01-26 20:16:42,401 | INFO     | PID=156830 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 21:17:27] 2026-01-26 20:16:42,401 | INFO     | .. there are 3 such processes running
[2026-01-26 21:17:27] 2026-01-26 20:16:42,435 | INFO     | --- collectZombieJob: --- 10, [161358]
[2026-01-26 21:17:27] 2026-01-26 20:16:42,435 | INFO     | zombie collector waiting for pid 161358
[2026-01-26 21:17:27] 2026-01-26 20:16:42,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:17:27] 2026-01-26 20:16:42,436 | INFO     | collected zombie processes
[2026-01-26 21:17:27] 2026-01-26 20:16:42,436 | INFO     | will attempt to kill all subprocesses of pid=161358
[2026-01-26 21:17:27] 2026-01-26 20:16:42,532 | INFO     | process IDs to be killed: [161358] (in reverse order)
[2026-01-26 21:17:27] 2026-01-26 20:16:42,575 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:17:27] 2026-01-26 20:16:42,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:17:27] 2026-01-26 20:16:42,577 | INFO     | did not find any defunct processes belonging to 161358
[2026-01-26 21:17:27] 2026-01-26 20:16:42,580 | INFO     | did not find any defunct processes belonging to 161358
[2026-01-26 21:17:27] 2026-01-26 20:16:42,580 | INFO     | ready for new job
[2026-01-26 21:17:27] 2026-01-26 20:16:42,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | **************************************
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | **************************************
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | 
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | pilot is running in a VM
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | architecture information:
[2026-01-26 21:17:27] 2026-01-26 20:16:42,581 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:17:27] 2026-01-26 20:16:42,592 | INFO     | cat /etc/os-release:
[2026-01-26 21:17:27] NAME="CentOS Linux"
[2026-01-26 21:17:27] VERSION="7 (Core)"
[2026-01-26 21:17:27] ID="centos"
[2026-01-26 21:17:27] ID_LIKE="rhel fedora"
[2026-01-26 21:17:27] VERSION_ID="7"
[2026-01-26 21:17:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:17:27] ANSI_COLOR="0;31"
[2026-01-26 21:17:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:17:27] HOME_URL="https://www.centos.org/"
[2026-01-26 21:17:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:17:27] 
[2026-01-26 21:17:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:17:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:17:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:17:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:17:27] 
[2026-01-26 21:17:27] 2026-01-26 20:16:42,592 | INFO     | **************************************
[2026-01-26 21:17:27] 2026-01-26 20:16:43,095 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | INFO     | sufficient remaining disk space (42246078464 B)
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | INFO     | update_server=False
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:17:27] 2026-01-26 20:16:43,106 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:17:27] 2026-01-26 20:16:43,107 | INFO     | aborting loop
[2026-01-26 21:17:27] 2026-01-26 20:16:43,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:17:27] 2026-01-26 20:16:44,043 | INFO     | all data control threads have been joined
[2026-01-26 21:17:27] 2026-01-26 20:16:44,088 | INFO     | all job control threads have been joined
[2026-01-26 21:17:27] 2026-01-26 20:16:44,112 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,113 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,113 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,120 | INFO     | all payload control threads have been joined
[2026-01-26 21:17:27] 2026-01-26 20:16:44,391 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,706 | INFO     | [job] validate thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,718 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,920 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,933 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:44,945 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:45,049 | INFO     | [data] control thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:45,093 | INFO     | [job] control thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:45,113 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:45,126 | INFO     | [payload] control thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:45,598 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:46,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:17:27] 2026-01-26 20:16:50,291 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:16:53,440 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:17:27] 2026-01-26 20:16:54,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:17:27] 2026-01-26 20:17:20,760 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:17:27] 2026-01-26 20:17:22,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138757520070464)>', '<ExcThread(monitor, started 138756870878976)>']
[2026-01-26 21:17:27] 2026-01-26 20:17:23,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:17:27] 2026-01-26 20:17:23,311 | INFO     | [monitor] control thread has ended
[2026-01-26 21:17:27] 2026-01-26 20:17:27,629 | INFO     | all workflow threads have been joined
[2026-01-26 21:17:27] 2026-01-26 20:17:27,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:17:27] 2026-01-26 20:17:27,629 | INFO     | traces error code: 0
[2026-01-26 21:17:27] 2026-01-26 20:17:27,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:17:27] 2026-01-26 20:17:27,690 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:17:27] 2026-01-26 20:17:27,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:17:27] 2026-01-26 20:17:27,698 [wrapper] pilotpid: 156830
[2026-01-26 21:17:27] 2026-01-26 20:17:27,702 [wrapper] Pilot exit status: 0
[2026-01-26 21:17:27] 2026-01-26 20:17:27,717 [wrapper] pandaids: 6983773287
[2026-01-26 21:17:27] 2026-01-26 20:17:27,753 [wrapper] cleanup supervisor_pilot  196139 156831
[2026-01-26 21:17:27] 2026-01-26 20:17:27,756 [wrapper] Test setup, not cleaning
[2026-01-26 21:17:27] 2026-01-26 20:17:27,760 [wrapper] apfmon messages muted
[2026-01-26 21:17:27] 2026-01-26 20:17:27,763 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:17:27] 2026-01-26 20:17:27,767 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:17:27]  *** Error codes and diagnostics ***
[2026-01-26 21:17:27]     "exeErrorCode": 0,
[2026-01-26 21:17:27]     "exeErrorDiag": "",
[2026-01-26 21:17:27]     "pilotErrorCode": 0,
[2026-01-26 21:17:27]     "pilotErrorDiag": "",
[2026-01-26 21:17:27]  *** Listing of results directory ***
[2026-01-26 21:17:27] insgesamt 678696
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-26 21:17:27] -rwx------ 1 yeti boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc       100 Jan 26 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:17:27] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 19:58 run_atlas
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc       105 Jan 26 19:58 job.xml
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc     15845 Jan 26 19:58 start_atlas.sh
[2026-01-26 21:17:27] drwxrwx--x 2 yeti boinc      4096 Jan 26 19:58 shared
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc    597744 Jan 26 19:58 input.tar.gz
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc      6560 Jan 26 19:58 init_data.xml
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc 503247730 Jan 26 19:58 EVNT.48317869._000042.pool.root.1
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc         0 Jan 26 19:58 boinc_setup_complete
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc         0 Jan 26 19:58 boinc_lockfile
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc      2512 Jan 26 19:58 pandaJob.out
[2026-01-26 21:17:27] -rw------- 1 yeti boinc        52 Jan 26 19:58 setup.sh.local
[2026-01-26 21:17:27] -rw------- 1 yeti boinc   1006384 Jan 26 19:58 agis_schedconf.cvmfs.json
[2026-01-26 21:17:27] -rw------- 1 yeti boinc   1516246 Jan 26 19:58 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:17:27] -rw------- 1 yeti boinc       423 Jan 26 19:58 workernode_map.json
[2026-01-26 21:17:27] drwx------ 5 yeti boinc      4096 Jan 26 19:58 pilot3
[2026-01-26 21:17:27] -rw------- 1 yeti boinc        95 Jan 26 21:15 pilot_heartbeat.json
[2026-01-26 21:17:27] -rw------- 1 yeti boinc 185860752 Jan 26 21:16 HITS.48317872._002064.pool.root.1
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc       530 Jan 26 21:16 boinc_task_state.xml
[2026-01-26 21:17:27] -rw------- 1 yeti boinc      1020 Jan 26 21:16 memory_monitor_summary.json
[2026-01-26 21:17:27] -rw------- 1 yeti boinc    252710 Jan 26 21:16 log.48317872._002064.job.log.tgz.1
[2026-01-26 21:17:27] -rw------- 1 yeti boinc      6274 Jan 26 21:16 heartbeat.json
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc      8192 Jan 26 21:17 boinc_mmap_file
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc        27 Jan 26 21:17 wrapper_checkpoint.txt
[2026-01-26 21:17:27] -rw------- 1 yeti boinc      4696 Jan 26 21:17 pilotlog.txt
[2026-01-26 21:17:27] -rw------- 1 yeti boinc    710719 Jan 26 21:17 log.48317872._002064.job.log.1
[2026-01-26 21:17:27] -rw------- 1 yeti boinc       357 Jan 26 21:17 output.list
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc       620 Jan 26 21:17 runtime_log
[2026-01-26 21:17:27] -rw------- 1 yeti boinc    983040 Jan 26 21:17 result.tar.gz
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc      9551 Jan 26 21:17 runtime_log.err
[2026-01-26 21:17:27] -rw------- 1 yeti boinc       639 Jan 26 21:17 JEuKDm7HS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1K2KDmC5Vjgn.diag
[2026-01-26 21:17:27] -rw-r--r-- 1 yeti boinc     21153 Jan 26 21:17 stderr.txt
[2026-01-26 21:17:27] HITS file was successfully produced:
[2026-01-26 21:17:27] -rw------- 1 yeti boinc 185860752 Jan 26 21:16 shared/HITS.pool.root.1
[2026-01-26 21:17:27]  *** Contents of shared directory: ***
[2026-01-26 21:17:27] insgesamt 674532
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc     15845 Jan 26 19:58 start_atlas.sh
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc    597744 Jan 26 19:58 input.tar.gz
[2026-01-26 21:17:27] -rw-r--r-- 2 yeti boinc 503247730 Jan 26 19:58 ATLAS.root_0
[2026-01-26 21:17:27] -rw------- 1 yeti boinc 185860752 Jan 26 21:16 HITS.pool.root.1
[2026-01-26 21:17:27] -rw------- 1 yeti boinc    983040 Jan 26 21:17 result.tar.gz
21:17:28 (152816): run_atlas exited; CPU time 17805.340056
21:17:28 (152816): called boinc_finish(0)

</stderr_txt>
]]>

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