Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:56:21 (610667): wrapper (7.7.26015): starting
12:56:21 (610667): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 12:56:21] Arguments: --nthreads 4
[2026-01-27 12:56:21] Threads: 4
[2026-01-27 12:56:21] Checking for CVMFS
[2026-01-27 12:56:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 12:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 12:56:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 12:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 12:56:22] 2.9.2.0 3080 3632 96760 155583 0 50 20355610 36864000 0 130560 0 1712681 99.985 139474 4549 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 12:56:22] CVMFS is ok
[2026-01-27 12:56:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 12:56:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 12:56:22] Further information can be found at the LHC@home message board.
[2026-01-27 12:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 12:56:22] Checking for apptainer binary...
[2026-01-27 12:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 12:56:22] Running /usr/bin/apptainer --version
[2026-01-27 12:56:22] apptainer version 1.4.1-1.1
[2026-01-27 12:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 12:56:22] thA381
[2026-01-27 12:56:22] apptainer works
[2026-01-27 12:56:22] Set ATHENA_PROC_NUMBER=4
[2026-01-27 12:56:22] Set ATHENA_CORE_NUMBER=4
[2026-01-27 12:56:22] Starting ATLAS job with PandaID=6983771233
[2026-01-27 12:56:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 14:16:03]  *** The last 200 lines of the pilot log: ***
[2026-01-27 14:16:03] 2026-01-27 13:15:32,861 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 14:16:03] 2026-01-27 13:15:32,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 14:16:03] 2026-01-27 13:15:32,863 | INFO     | did not find any defunct processes belonging to 619289
[2026-01-27 14:16:03] 2026-01-27 13:15:32,864 | INFO     | did not find any defunct processes belonging to 619289
[2026-01-27 14:16:03] 2026-01-27 13:15:32,864 | INFO     | ready for new job
[2026-01-27 14:16:03] 2026-01-27 13:15:32,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 14:16:03] 2026-01-27 13:15:32,865 | INFO     | **************************************
[2026-01-27 14:16:03] 2026-01-27 13:15:32,865 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 14:16:03] 2026-01-27 13:15:32,865 | INFO     | **************************************
[2026-01-27 14:16:03] 2026-01-27 13:15:32,865 | INFO     | 
[2026-01-27 14:16:03] 2026-01-27 13:15:32,866 | INFO     | architecture information:
[2026-01-27 14:16:03] 2026-01-27 13:15:32,866 | INFO     | executing command: cat /etc/os-release
[2026-01-27 14:16:03] 2026-01-27 13:15:32,880 | INFO     | cat /etc/os-release:
[2026-01-27 14:16:03] NAME="CentOS Linux"
[2026-01-27 14:16:03] VERSION="7 (Core)"
[2026-01-27 14:16:03] ID="centos"
[2026-01-27 14:16:03] ID_LIKE="rhel fedora"
[2026-01-27 14:16:03] VERSION_ID="7"
[2026-01-27 14:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 14:16:03] ANSI_COLOR="0;31"
[2026-01-27 14:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 14:16:03] HOME_URL="https://www.centos.org/"
[2026-01-27 14:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 14:16:03] 
[2026-01-27 14:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 14:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 14:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 14:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 14:16:03] 
[2026-01-27 14:16:03] 2026-01-27 13:15:32,880 | INFO     | **************************************
[2026-01-27 14:16:03] 2026-01-27 13:15:33,384 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | INFO     | sufficient remaining disk space (237582155776 B)
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | INFO     | update_server=False
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 14:16:03] 2026-01-27 13:15:33,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:16:03] 2026-01-27 13:15:33,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:16:03] 2026-01-27 13:15:33,527 | INFO     | aborting loop
[2026-01-27 14:16:03] 2026-01-27 13:15:33,701 | INFO     | all data control threads have been joined
[2026-01-27 14:16:03] 2026-01-27 13:15:34,408 | INFO     | [job] retrieve thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:34,408 | INFO     | [job] queue monitor thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:34,432 | INFO     | all job control threads have been joined
[2026-01-27 14:16:03] 2026-01-27 13:15:34,473 | INFO     | all payload control threads have been joined
[2026-01-27 14:16:03] 2026-01-27 13:15:34,533 | INFO     | [job] job monitor thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:34,544 | INFO     | [payload] failed_post thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:34,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 14:16:03] 2026-01-27 13:15:34,704 | INFO     | [data] control thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,373 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,438 | INFO     | [job] control thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,477 | INFO     | [payload] control thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,597 | INFO     | [job] validate thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,685 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,704 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 14:16:03] 2026-01-27 13:15:35,810 | INFO     | [data] copytool_in thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:35,815 | INFO     | [payload] validate_post thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:36,595 | INFO     | [data] copytool_out thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:39,734 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:40,899 | INFO     | [monitor] cgroup control has ended
[2026-01-27 14:16:03] 2026-01-27 13:15:44,279 | INFO     | job.realtimelogging is not enabled
[2026-01-27 14:16:03] 2026-01-27 13:15:45,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 14:16:03] 2026-01-27 13:15:46,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361836472128)>', '<ExcThread(monitor, started 140361024378624)>']
[2026-01-27 14:16:03] 2026-01-27 13:15:51,773 | INFO     | all workflow threads have been joined
[2026-01-27 14:16:03] 2026-01-27 13:15:51,773 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 14:16:03] 2026-01-27 13:15:51,773 | INFO     | traces error code: 0
[2026-01-27 14:16:03] 2026-01-27 13:15:51,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 14:16:03] 2026-01-27 13:16:03,605 | INFO     | PID=614778 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 14:16:03] 2026-01-27 13:16:03,606 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 14:16:03] 2026-01-27 13:16:03,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 14:16:03] 2026-01-27 13:16:03,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 14:16:03] 2026-01-27 13:16:03,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 14:16:03] 2026-01-27 13:16:03,606 | INFO     | [monitor] control thread has ended
[2026-01-27 14:16:03] 2026-01-27 13:16:03,683 [wrapper] ==== pilot stdout END ====
[2026-01-27 14:16:03] 2026-01-27 13:16:03,687 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 14:16:03] 2026-01-27 13:16:03,691 [wrapper] pilotpid: 614778
[2026-01-27 14:16:03] 2026-01-27 13:16:03,695 [wrapper] Pilot exit status: 0
[2026-01-27 14:16:03] 2026-01-27 13:16:03,706 [wrapper] pandaids: 6983771233
[2026-01-27 14:16:03] 2026-01-27 13:16:03,728 [wrapper] cleanup supervisor_pilot  625329 614779
[2026-01-27 14:16:03] 2026-01-27 13:16:03,732 [wrapper] Test setup, not cleaning
[2026-01-27 14:16:03] 2026-01-27 13:16:03,736 [wrapper] apfmon messages muted
[2026-01-27 14:16:03] 2026-01-27 13:16:03,740 [wrapper] ==== wrapper stdout END ====
[2026-01-27 14:16:03] 2026-01-27 13:16:03,744 [wrapper] ==== wrapper stderr END ====
[2026-01-27 14:16:03]  *** Error codes and diagnostics ***
[2026-01-27 14:16:03]     "exeErrorCode": 0,
[2026-01-27 14:16:03]     "exeErrorDiag": "",
[2026-01-27 14:16:03]     "pilotErrorCode": 0,
[2026-01-27 14:16:03]     "pilotErrorDiag": "",
[2026-01-27 14:16:03]  *** Listing of results directory ***
[2026-01-27 14:16:03] total 442448
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 14:16:03] -rwx------ 1 boinc boinc     36322 Jan 26 02:15 runpilot2-wrapper.sh
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:18 queuedata.json
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc       100 Jan 27 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 14:16:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 12:56 run_atlas
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc       105 Jan 27 12:56 job.xml
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc 267234544 Jan 27 12:56 EVNT.48329371._000003.pool.root.1
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc    597773 Jan 27 12:56 input.tar.gz
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc     15845 Jan 27 12:56 start_atlas.sh
[2026-01-27 14:16:03] drwxrwx--x 2 boinc boinc      4096 Jan 27 12:56 shared
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc         0 Jan 27 12:56 boinc_setup_complete
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc      6376 Jan 27 12:56 init_data.xml
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc         0 Jan 27 12:56 boinc_lockfile
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc      2605 Jan 27 12:56 pandaJob.out
[2026-01-27 14:16:03] -rw------- 1 boinc boinc   1002853 Jan 27 12:56 agis_schedconf.cvmfs.json
[2026-01-27 14:16:03] -rw------- 1 boinc boinc   1516246 Jan 27 12:56 agis_ddmendpoints.agis.ALL.json
[2026-01-27 14:16:03] -rw------- 1 boinc boinc       421 Jan 27 12:56 workernode_map.json
[2026-01-27 14:16:03] drwx------ 5 boinc boinc      4096 Jan 27 12:56 pilot3
[2026-01-27 14:16:03] -rw------- 1 boinc boinc 179977955 Jan 27 14:15 HITS.48329373._000069.pool.root.1
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc       529 Jan 27 14:15 boinc_task_state.xml
[2026-01-27 14:16:03] -rw------- 1 boinc boinc      1019 Jan 27 14:15 memory_monitor_summary.json
[2026-01-27 14:16:03] -rw------- 1 boinc boinc    273776 Jan 27 14:15 log.48329373._000069.job.log.tgz.1
[2026-01-27 14:16:03] -rw------- 1 boinc boinc      6301 Jan 27 14:15 heartbeat.json
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc        27 Jan 27 14:15 wrapper_checkpoint.txt
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc      8192 Jan 27 14:15 boinc_mmap_file
[2026-01-27 14:16:03] -rw------- 1 boinc boinc       746 Jan 27 14:16 pilotlog.txt
[2026-01-27 14:16:03] -rw------- 1 boinc boinc        95 Jan 27 14:16 pilot_heartbeat.json
[2026-01-27 14:16:03] -rw------- 1 boinc boinc    696597 Jan 27 14:16 log.48329373._000069.job.log.1
[2026-01-27 14:16:03] -rw------- 1 boinc boinc       357 Jan 27 14:16 output.list
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc       620 Jan 27 14:16 runtime_log
[2026-01-27 14:16:03] -rw------- 1 boinc boinc    983040 Jan 27 14:16 result.tar.gz
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc      8896 Jan 27 14:16 runtime_log.err
[2026-01-27 14:16:03] -rw------- 1 boinc boinc       657 Jan 27 14:16 mdmLDmENQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHH2KDmithlSo.diag
[2026-01-27 14:16:03] -rw-r--r-- 1 boinc boinc     10051 Jan 27 14:16 stderr.txt
[2026-01-27 14:16:03] HITS file was successfully produced:
[2026-01-27 14:16:03] -rw------- 1 boinc boinc 179977955 Jan 27 14:15 shared/HITS.pool.root.1
[2026-01-27 14:16:03]  *** Contents of shared directory: ***
[2026-01-27 14:16:03] total 438300
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc 267234544 Jan 27 12:56 ATLAS.root_0
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc    597773 Jan 27 12:56 input.tar.gz
[2026-01-27 14:16:03] -rw-r--r-- 2 boinc boinc     15845 Jan 27 12:56 start_atlas.sh
[2026-01-27 14:16:03] -rw------- 1 boinc boinc 179977955 Jan 27 14:15 HITS.pool.root.1
[2026-01-27 14:16:03] -rw------- 1 boinc boinc    983040 Jan 27 14:16 result.tar.gz
14:16:05 (610667): run_atlas exited; CPU time 17839.806999
14:16:05 (610667): called boinc_finish(0)

</stderr_txt>
]]>

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