Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:28:07 (3655): wrapper (7.7.26015): starting
13:28:07 (3655): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 13:28:07] Arguments: --nthreads 8
[2026-01-26 13:28:07] Threads: 8
[2026-01-26 13:28:07] Checking for CVMFS
[2026-01-26 13:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 13:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 13:28:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 13:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 13:28:07] 2.11.2.0 10816 205855 143572 155556 0 50 13969215 18432001 1833 130560 0 135825853 99.981 7843511 29125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 13:28:07] CVMFS is ok
[2026-01-26 13:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 13:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 13:28:07] Further information can be found at the LHC@home message board.
[2026-01-26 13:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 13:28:07] Checking for apptainer binary...
[2026-01-26 13:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 13:28:07] Running /usr/bin/apptainer --version
[2026-01-26 13:28:07] apptainer version 1.3.2-1.el7
[2026-01-26 13:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 13:28:08] c-206-11.aglt2.org
[2026-01-26 13:28:08] apptainer works
[2026-01-26 13:28:08] Set ATHENA_PROC_NUMBER=8
[2026-01-26 13:28:08] Set ATHENA_CORE_NUMBER=8
[2026-01-26 13:28:08] Starting ATLAS job with PandaID=6983448957
[2026-01-26 13:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:28:52]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:28:52] 2026-01-26 22:28:12,980 | INFO     | preparing for final server update for job 6983448957 in state='finished'
[2026-01-26 17:28:52] 2026-01-26 22:28:12,980 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983448957/jobReport.json
[2026-01-26 17:28:52] 2026-01-26 22:28:12,983 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 17:28:52] 2026-01-26 22:28:12,984 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:28:52] 2026-01-26 22:28:12,984 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:28:52] 2026-01-26 22:28:12,984 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:28:52] 2026-01-26 22:28:12,984 | INFO     | job 6983448957 has finished - writing final server update
[2026-01-26 17:28:52] 2026-01-26 22:28:12,985 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:28:52] 2026-01-26 22:28:12,990 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983448957/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:28:52] 2026-01-26 22:28:12,990 | INFO     | extracted standard info from prmon json
[2026-01-26 17:28:52] 2026-01-26 22:28:12,991 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:28:52] 2026-01-26 22:28:12,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:28:52] 2026-01-26 22:28:12,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:28:52] 2026-01-26 22:28:12,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:28:52] 2026-01-26 22:28:12,998 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:28:52] 2026-01-26 22:28:12,998 | INFO     | sum of square deviations: 4075741535.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,001 | INFO     | sum of deviations: -10277418317.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,001 | INFO     | mean x: 1769459291.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,001 | INFO     | mean y: 2514025.436440678
[2026-01-26 17:28:52] 2026-01-26 22:28:13,001 | INFO     | intersect: 4464394931.859687
[2026-01-26 17:28:52] 2026-01-26 22:28:13,002 | INFO     | chi2: 1.544837909714012
[2026-01-26 17:28:52] 2026-01-26 22:28:13,002 | INFO     | sum of square deviations: 3822136780.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,005 | INFO     | sum of deviations: -10339447723.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,005 | INFO     | mean x: 1769459139.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,005 | INFO     | mean y: 2513990.3766233767
[2026-01-26 17:28:52] 2026-01-26 22:28:13,005 | INFO     | intersect: 4789163793.5464325
[2026-01-26 17:28:52] 2026-01-26 22:28:13,006 | INFO     | chi2: 1.5433906522600822
[2026-01-26 17:28:52] 2026-01-26 22:28:13,006 | INFO     | current chi2=1.5433906522600822 (change=0.0936834502072538 %)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,006 | INFO     | right removable region: 230
[2026-01-26 17:28:52] 2026-01-26 22:28:13,007 | INFO     | sum of square deviations: 3822136780.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,009 | INFO     | sum of deviations: -43698230229.99999
[2026-01-26 17:28:52] 2026-01-26 22:28:13,009 | INFO     | mean x: 1769459444.0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,009 | INFO     | mean y: 2533918.826839827
[2026-01-26 17:28:52] 2026-01-26 22:28:13,009 | INFO     | intersect: 20232643571.407032
[2026-01-26 17:28:52] 2026-01-26 22:28:13,010 | INFO     | chi2: 0.20323826687472513
[2026-01-26 17:28:52] 2026-01-26 22:28:13,010 | INFO     | current chi2=0.20323826687472513 (change=86.84403939100966 %)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,010 | INFO     | sum of square deviations: 3579276412.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,012 | INFO     | sum of deviations: -39789502516.49998
[2026-01-26 17:28:52] 2026-01-26 22:28:13,013 | INFO     | mean x: 1769459596.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,013 | INFO     | mean y: 2531440.0132743362
[2026-01-26 17:28:52] 2026-01-26 22:28:13,013 | INFO     | intersect: 19672964497.907707
[2026-01-26 17:28:52] 2026-01-26 22:28:13,014 | INFO     | chi2: 0.19207441473553108
[2026-01-26 17:28:52] 2026-01-26 22:28:13,014 | INFO     | current chi2=0.19207441473553108 (change=5.49298727590281 %)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,014 | INFO     | left removable region: 20
[2026-01-26 17:28:52] 2026-01-26 22:28:13,014 | INFO     | sum of square deviations: 2871616632.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,016 | INFO     | sum of deviations: -24106580209.499996
[2026-01-26 17:28:52] 2026-01-26 22:28:13,016 | INFO     | mean x: 1769459718.5
[2026-01-26 17:28:52] 2026-01-26 22:28:13,017 | INFO     | mean y: 2521245.7
[2026-01-26 17:28:52] 2026-01-26 22:28:13,017 | INFO     | intersect: 14856740346.097113
[2026-01-26 17:28:52] 2026-01-26 22:28:13,017 | INFO     | chi2: 0.1507847600215832
[2026-01-26 17:28:52] 2026-01-26 22:28:13,017 | INFO     | current memory leak: -8.39 B/s (using 210 data points, chi2=0.15)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,018 | INFO     | could have reported an average CPU frequency of 2400 MHz (11 samples)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,018 | INFO     | ..............................
[2026-01-26 17:28:52] 2026-01-26 22:28:13,018 | INFO     | . Timing measurements:
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . get job = 0 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . initial setup = 5 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . payload setup = 4 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . stage-in = 0 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . payload execution = 14365 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,019 | INFO     | . stage-out = 2 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,020 | INFO     | . log creation = 0 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,020 | INFO     | ..............................
[2026-01-26 17:28:52] 2026-01-26 22:28:13,175 | INFO     | 
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | job summary report
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | --------------------------------------------------
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | PanDA job id: 6983448957
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | task id: 48298567
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | errors: (none)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,176 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | pilot state: finished 
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | transexitcode: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | exeerrorcode: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | exeerrordiag: 
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | exitcode: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,177 | INFO     | exitmsg: OK
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | cpuconsumptiontime: 109505 s
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | nevents: 400
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | neventsw: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | pid: 12087
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | pgrp: 12087
[2026-01-26 17:28:52] 2026-01-26 22:28:13,178 | INFO     | corecount: 8
[2026-01-26 17:28:52] 2026-01-26 22:28:13,179 | INFO     | event service: False
[2026-01-26 17:28:52] 2026-01-26 22:28:13,179 | INFO     | sizes: {0: 2284299, 1: 2284359, 11: 2284387, 14373: 2315254, 14374: 2315253, 14377: 2324491, 14378: 2324629}
[2026-01-26 17:28:52] 2026-01-26 22:28:13,179 | INFO     | --------------------------------------------------
[2026-01-26 17:28:52] 2026-01-26 22:28:13,179 | INFO     | 
[2026-01-26 17:28:52] 2026-01-26 22:28:13,179 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 17:28:52] 2026-01-26 22:28:13,210 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,213 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,213 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:28:52] 2026-01-26 22:28:13,214 | INFO     | job 6983448957 has completed (purged errors)
[2026-01-26 17:28:52] 2026-01-26 22:28:13,214 | INFO     | overall cleanup function is called
[2026-01-26 17:28:52] 2026-01-26 22:28:14,222 | INFO     | --- collectZombieJob: --- 10, [12087]
[2026-01-26 17:28:52] 2026-01-26 22:28:14,222 | INFO     | zombie collector waiting for pid 12087
[2026-01-26 17:28:52] 2026-01-26 22:28:14,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:28:52] 2026-01-26 22:28:14,222 | INFO     | collected zombie processes
[2026-01-26 17:28:52] 2026-01-26 22:28:14,222 | INFO     | will attempt to kill all subprocesses of pid=12087
[2026-01-26 17:28:52] 2026-01-26 22:28:14,389 | INFO     | process IDs to be killed: [12087] (in reverse order)
[2026-01-26 17:28:52] 2026-01-26 22:28:14,437 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:28:52] 2026-01-26 22:28:14,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:28:52] 2026-01-26 22:28:14,440 | INFO     | did not find any defunct processes belonging to 12087
[2026-01-26 17:28:52] 2026-01-26 22:28:14,443 | INFO     | did not find any defunct processes belonging to 12087
[2026-01-26 17:28:52] 2026-01-26 22:28:14,443 | INFO     | ready for new job
[2026-01-26 17:28:52] 2026-01-26 22:28:14,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:28:52] 2026-01-26 22:28:14,444 | INFO     | **************************************
[2026-01-26 17:28:52] 2026-01-26 22:28:14,445 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:28:52] 2026-01-26 22:28:14,445 | INFO     | **************************************
[2026-01-26 17:28:52] 2026-01-26 22:28:14,445 | INFO     | 
[2026-01-26 17:28:52] 2026-01-26 22:28:14,446 | INFO     | architecture information:
[2026-01-26 17:28:52] 2026-01-26 22:28:14,446 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:28:52] 2026-01-26 22:28:14,457 | INFO     | cat /etc/os-release:
[2026-01-26 17:28:52] NAME="CentOS Linux"
[2026-01-26 17:28:52] VERSION="7 (Core)"
[2026-01-26 17:28:52] ID="centos"
[2026-01-26 17:28:52] ID_LIKE="rhel fedora"
[2026-01-26 17:28:52] VERSION_ID="7"
[2026-01-26 17:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:28:52] ANSI_COLOR="0;31"
[2026-01-26 17:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:28:52] HOME_URL="https://www.centos.org/"
[2026-01-26 17:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:28:52] 
[2026-01-26 17:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:28:52] 
[2026-01-26 17:28:52] 2026-01-26 22:28:14,457 | INFO     | **************************************
[2026-01-26 17:28:52] 2026-01-26 22:28:14,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 17:28:52] 2026-01-26 22:28:14,972 | INFO     | sufficient remaining disk space (27602714624 B)
[2026-01-26 17:28:52] 2026-01-26 22:28:14,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:28:52] 2026-01-26 22:28:14,973 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:28:52] 2026-01-26 22:28:14,973 | INFO     | update_server=False
[2026-01-26 17:28:52] 2026-01-26 22:28:14,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:28:52] 2026-01-26 22:28:14,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:28:52] 2026-01-26 22:28:14,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:28:52] 2026-01-26 22:28:15,068 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 17:28:52] 2026-01-26 22:28:15,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 17:28:52] 2026-01-26 22:28:15,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:28:52] 2026-01-26 22:28:15,069 | INFO     | will abort loop
[2026-01-26 17:28:52] 2026-01-26 22:28:15,979 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:15,979 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,008 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,020 | INFO     | [job] validate thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,034 | INFO     | all data control threads have been joined
[2026-01-26 17:28:52] 2026-01-26 22:28:16,041 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,053 | INFO     | all payload control threads have been joined
[2026-01-26 17:28:52] 2026-01-26 22:28:16,058 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,074 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,478 | INFO     | all job control threads have been joined
[2026-01-26 17:28:52] 2026-01-26 22:28:16,649 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,979 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:16,988 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:17,041 | INFO     | [data] control thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:17,058 | INFO     | [payload] control thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:17,193 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:17,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:17,484 | INFO     | [job] control thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:18,038 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-01-26 17:28:52] 2026-01-26 22:28:18,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:28:52] 2026-01-26 22:28:22,359 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:28:52] 2026-01-26 22:28:46,041 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:28:52] 2026-01-26 22:28:46,176 | INFO     | PID=7634 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 17:28:52] 2026-01-26 22:28:46,177 | INFO     | .. there are 3 such processes running
[2026-01-26 17:28:52] 2026-01-26 22:28:46,177 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:28:52] 2026-01-26 22:28:46,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:28:52] 2026-01-26 22:28:46,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:28:52] 2026-01-26 22:28:47,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289949955904)>', '<ExcThread(monitor, started 140289503115008)>']
[2026-01-26 17:28:52] 2026-01-26 22:28:48,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:28:52] 2026-01-26 22:28:48,184 | INFO     | [monitor] control thread has ended
[2026-01-26 17:28:52] 2026-01-26 22:28:52,651 | INFO     | all workflow threads have been joined
[2026-01-26 17:28:52] 2026-01-26 22:28:52,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:28:52] 2026-01-26 22:28:52,652 | INFO     | traces error code: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:52,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:28:52] 2026-01-26 22:28:52,772 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:28:52] 2026-01-26 22:28:52,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:28:52] 2026-01-26 22:28:52,776 [wrapper] pilotpid: 7634
[2026-01-26 17:28:52] 2026-01-26 22:28:52,778 [wrapper] Pilot exit status: 0
[2026-01-26 17:28:52] 2026-01-26 22:28:52,790 [wrapper] pandaids: 6983448957
[2026-01-26 17:28:52] 2026-01-26 22:28:52,820 [wrapper] cleanup supervisor_pilot 11993 7635
[2026-01-26 17:28:52] 2026-01-26 22:28:52,823 [wrapper] Test setup, not cleaning
[2026-01-26 17:28:52] 2026-01-26 22:28:52,825 [wrapper] apfmon messages muted
[2026-01-26 17:28:52] 2026-01-26 22:28:52,828 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:28:52] 2026-01-26 22:28:52,830 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:28:52]  *** Error codes and diagnostics ***
[2026-01-26 17:28:52]     "exeErrorCode": 0,
[2026-01-26 17:28:52]     "exeErrorDiag": "",
[2026-01-26 17:28:52]     "pilotErrorCode": 0,
[2026-01-26 17:28:52]     "pilotErrorDiag": "",
[2026-01-26 17:28:52]  *** Listing of results directory ***
[2026-01-26 17:28:52] total 422472
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:48 queuedata.json
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 17:28:52] -rwx------ 1 boincer umatlas     36322 Jan 25 15:48 runpilot2-wrapper.sh
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas       100 Jan 26 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:28:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 13:28 run_atlas
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas       105 Jan 26 13:28 job.xml
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas 250114722 Jan 26 13:28 EVNT.48298565._000003.pool.root.1
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 13:28 start_atlas.sh
[2026-01-26 17:28:52] drwxrwx--x 2 boincer umatlas      4096 Jan 26 13:28 shared
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas    597768 Jan 26 13:28 input.tar.gz
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas         0 Jan 26 13:28 boinc_lockfile
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas      2611 Jan 26 13:28 pandaJob.out
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas        57 Jan 26 13:28 setup.sh.local
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas   1006384 Jan 26 13:28 agis_schedconf.cvmfs.json
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas       445 Jan 26 13:28 workernode_map.json
[2026-01-26 17:28:52] drwx------ 5 boincer umatlas      4096 Jan 26 13:28 pilot3
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 17:19 init_data.xml
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas 173570640 Jan 26 17:27 HITS.48298567._000069.pool.root.1
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas       531 Jan 26 17:27 boinc_task_state.xml
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas      1055 Jan 26 17:28 memory_monitor_summary.json
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas   1516246 Jan 26 17:28 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas    475433 Jan 26 17:28 log.48298567._000069.job.log.tgz.1
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas        95 Jan 26 17:28 pilot_heartbeat.json
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas      6419 Jan 26 17:28 heartbeat.json
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 17:28 boinc_mmap_file
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas        29 Jan 26 17:28 wrapper_checkpoint.txt
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas      5002 Jan 26 17:28 pilotlog.txt
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas   2013886 Jan 26 17:28 log.48298567._000069.job.log.1
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas       357 Jan 26 17:28 output.list
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas       620 Jan 26 17:28 runtime_log
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas   2508800 Jan 26 17:28 result.tar.gz
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas      9342 Jan 26 17:28 runtime_log.err
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas       663 Jan 26 17:28 bYNNDmJDM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoG8KDmprcWan.diag
[2026-01-26 17:28:52] -rw-r--r-- 1 boincer umatlas     21227 Jan 26 17:28 stderr.txt
[2026-01-26 17:28:52] HITS file was successfully produced:
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas 173570640 Jan 26 17:27 shared/HITS.pool.root.1
[2026-01-26 17:28:52]  *** Contents of shared directory: ***
[2026-01-26 17:28:52] total 416816
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas 250114722 Jan 26 13:28 ATLAS.root_0
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 13:28 start_atlas.sh
[2026-01-26 17:28:52] -rw-r--r-- 2 boincer umatlas    597768 Jan 26 13:28 input.tar.gz
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas 173570640 Jan 26 17:27 HITS.pool.root.1
[2026-01-26 17:28:52] -rw------- 1 boincer umatlas   2508800 Jan 26 17:28 result.tar.gz
17:28:54 (3655): run_atlas exited; CPU time 109710.584725
17:28:54 (3655): called boinc_finish(0)

</stderr_txt>
]]>

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