Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:02:27 (2964446): wrapper (7.7.26015): starting
22:02:27 (2964446): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 22:02:27] Arguments: --nthreads 4
[2026-01-26 22:02:27] Threads: 4
[2026-01-26 22:02:27] Checking for CVMFS
[2026-01-26 22:02:27] No cvmfs_config command found, will try listing directly
[2026-01-26 22:02:27] CVMFS is ok
[2026-01-26 22:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:02:27] Further information can be found at the LHC@home message board.
[2026-01-26 22:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:02:27] Checking for apptainer binary...
[2026-01-26 22:02:27] which: no apptainer in ((null))
[2026-01-26 22:02:27] apptainer is not installed, using version from CVMFS
[2026-01-26 22:02:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:02:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-26 22:02:27] apptainer works
[2026-01-26 22:02:27] Set ATHENA_PROC_NUMBER=4
[2026-01-26 22:02:27] Set ATHENA_CORE_NUMBER=4
[2026-01-26 22:02:27] Starting ATLAS job with PandaID=6984043231
[2026-01-26 22:02:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:19:59]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:19:59] 2026-01-26 23:59:17,626 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,651 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6984043231/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,651 | INFO     | extracted standard info from prmon json
[2026-01-27 01:19:59] 2026-01-26 23:59:17,651 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:19:59] 2026-01-26 23:59:17,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:19:59] 2026-01-26 23:59:17,652 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:19:59] 2026-01-26 23:59:17,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:19:59] 2026-01-26 23:59:17,656 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:19:59] 2026-01-26 23:59:17,656 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 01:19:59] 2026-01-26 23:59:17,657 | INFO     | sum of deviations: 10740159925.499994
[2026-01-27 01:19:59] 2026-01-26 23:59:17,657 | INFO     | mean x: 1769466673.5
[2026-01-27 01:19:59] 2026-01-26 23:59:17,657 | INFO     | mean y: 2299382.591954023
[2026-01-27 01:19:59] 2026-01-26 23:59:17,657 | INFO     | intersect: -11632028836.378115
[2026-01-27 01:19:59] 2026-01-26 23:59:17,658 | INFO     | chi2: 2.115410835901129
[2026-01-27 01:19:59] 2026-01-26 23:59:17,658 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,659 | INFO     | sum of deviations: 21163528002.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,659 | INFO     | mean x: 1769466521.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,659 | INFO     | mean y: 2310717.0887573967
[2026-01-27 01:19:59] 2026-01-26 23:59:17,659 | INFO     | intersect: -25018828855.478485
[2026-01-27 01:19:59] 2026-01-26 23:59:17,660 | INFO     | chi2: 1.307284381731616
[2026-01-27 01:19:59] 2026-01-26 23:59:17,660 | INFO     | current chi2=1.307284381731616 (change=38.2018679518234 %)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,660 | INFO     | sum of square deviations: 1367709365.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,661 | INFO     | sum of deviations: 20454508959.000004
[2026-01-27 01:19:59] 2026-01-26 23:59:17,661 | INFO     | mean x: 1769466368.5
[2026-01-27 01:19:59] 2026-01-26 23:59:17,661 | INFO     | mean y: 2309878.6219512196
[2026-01-27 01:19:59] 2026-01-26 23:59:17,662 | INFO     | intersect: -26460597090.749027
[2026-01-27 01:19:59] 2026-01-26 23:59:17,662 | INFO     | chi2: 1.3082397555349152
[2026-01-27 01:19:59] 2026-01-26 23:59:17,662 | INFO     | current chi2=1.3082397555349152 (change=-0.07308079379283666 %)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,662 | INFO     | right removable region: 163
[2026-01-27 01:19:59] 2026-01-26 23:59:17,662 | INFO     | sum of square deviations: 1496660620.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,663 | INFO     | sum of deviations: -10402681299.000002
[2026-01-27 01:19:59] 2026-01-26 23:59:17,663 | INFO     | mean x: 1769466826.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,664 | INFO     | mean y: 2322584.7810650887
[2026-01-27 01:19:59] 2026-01-26 23:59:17,664 | INFO     | intersect: 12301169239.830418
[2026-01-27 01:19:59] 2026-01-26 23:59:17,664 | INFO     | chi2: 0.8333207391342292
[2026-01-27 01:19:59] 2026-01-26 23:59:17,664 | INFO     | current chi2=0.8333207391342292 (change=60.6071442486845 %)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,664 | INFO     | sum of square deviations: 1367709365.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,665 | INFO     | sum of deviations: -9253054254.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,665 | INFO     | mean x: 1769466978.5
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | mean y: 2321218.426829268
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | intersect: 11973412717.622604
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | chi2: 0.832633491489825
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | current chi2=0.832633491489825 (change=0.08247096371538863 %)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | left removable region: 20
[2026-01-27 01:19:59] 2026-01-26 23:59:17,666 | INFO     | sum of square deviations: 906703512.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,667 | INFO     | sum of deviations: 1029921682.0000001
[2026-01-27 01:19:59] 2026-01-26 23:59:17,667 | INFO     | mean x: 1769466948.0
[2026-01-27 01:19:59] 2026-01-26 23:59:17,667 | INFO     | mean y: 2333791.839160839
[2026-01-27 01:19:59] 2026-01-26 23:59:17,668 | INFO     | intersect: -2007598177.3308964
[2026-01-27 01:19:59] 2026-01-26 23:59:17,668 | INFO     | chi2: 6.533593729790701e-05
[2026-01-27 01:19:59] 2026-01-26 23:59:17,668 | INFO     | current memory leak: 1.14 B/s (using 143 data points, chi2=0.00)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | could have reported an average CPU frequency of 2701 MHz (9 samples)
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | ..............................
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . Timing measurements:
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . get job = 0 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . initial setup = 7 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . payload setup = 8 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . stage-in = 0 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,669 | INFO     | . payload execution = 10560 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,670 | INFO     | . stage-out = 0 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,670 | INFO     | . log creation = 0 s
[2026-01-27 01:19:59] 2026-01-26 23:59:17,670 | INFO     | ..............................
[2026-01-27 01:19:59] 2026-01-26 23:59:18,188 | INFO     | 
[2026-01-27 01:19:59] 2026-01-26 23:59:18,189 | INFO     | job summary report
[2026-01-27 01:19:59] 2026-01-26 23:59:18,189 | INFO     | --------------------------------------------------
[2026-01-27 01:19:59] 2026-01-26 23:59:18,189 | INFO     | PanDA job id: 6984043231
[2026-01-27 01:19:59] 2026-01-26 23:59:18,189 | INFO     | task id: 48317911
[2026-01-27 01:19:59] 2026-01-26 23:59:18,189 | INFO     | errors: (none)
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | pilot state: finished 
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | transexitcode: 0
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | exeerrorcode: 0
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | exeerrordiag: 
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | exitcode: 0
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | exitmsg: OK
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | cpuconsumptiontime: 40839 s
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | nevents: 400
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | neventsw: 0
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | pid: 2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:18,190 | INFO     | pgrp: 2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | corecount: 4
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | event service: False
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | sizes: {0: 2283782, 1: 2284243, 11: 2284243, 10573: 2313509, 10575: 2322529, 10576: 2322971}
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | --------------------------------------------------
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | 
[2026-01-27 01:19:59] 2026-01-26 23:59:18,191 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2026-01-27 01:19:59] 2026-01-26 23:59:18,220 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,223 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:19:59] 2026-01-26 23:59:18,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,223 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:19:59] 2026-01-26 23:59:18,223 | INFO     | job 6984043231 has completed (purged errors)
[2026-01-27 01:19:59] 2026-01-26 23:59:18,223 | INFO     | overall cleanup function is called
[2026-01-27 01:19:59] 2026-01-26 23:59:19,233 | INFO     | --- collectZombieJob: --- 10, [2974173]
[2026-01-27 01:19:59] 2026-01-26 23:59:19,233 | INFO     | zombie collector waiting for pid 2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:19,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:19:59] 2026-01-26 23:59:19,233 | INFO     | collected zombie processes
[2026-01-27 01:19:59] 2026-01-26 23:59:19,233 | INFO     | will attempt to kill all subprocesses of pid=2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:20,003 | INFO     | process IDs to be killed: [2974173] (in reverse order)
[2026-01-27 01:19:59] 2026-01-26 23:59:20,271 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:19:59] 2026-01-26 23:59:20,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:19:59] 2026-01-26 23:59:20,303 | INFO     | did not find any defunct processes belonging to 2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:20,331 | INFO     | did not find any defunct processes belonging to 2974173
[2026-01-27 01:19:59] 2026-01-26 23:59:20,332 | INFO     | ready for new job
[2026-01-27 01:19:59] 2026-01-26 23:59:20,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:19:59] 2026-01-26 23:59:20,334 | INFO     | **************************************
[2026-01-27 01:19:59] 2026-01-26 23:59:20,335 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:19:59] 2026-01-26 23:59:20,335 | INFO     | **************************************
[2026-01-27 01:19:59] 2026-01-26 23:59:20,335 | INFO     | 
[2026-01-27 01:19:59] 2026-01-26 23:59:20,344 | INFO     | architecture information:
[2026-01-27 01:19:59] 2026-01-26 23:59:20,344 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:19:59] 2026-01-26 23:59:20,364 | INFO     | cat /etc/os-release:
[2026-01-27 01:19:59] NAME="CentOS Linux"
[2026-01-27 01:19:59] VERSION="7 (Core)"
[2026-01-27 01:19:59] ID="centos"
[2026-01-27 01:19:59] ID_LIKE="rhel fedora"
[2026-01-27 01:19:59] VERSION_ID="7"
[2026-01-27 01:19:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:19:59] ANSI_COLOR="0;31"
[2026-01-27 01:19:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:19:59] HOME_URL="https://www.centos.org/"
[2026-01-27 01:19:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:19:59] 
[2026-01-27 01:19:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:19:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:19:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:19:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:19:59] 
[2026-01-27 01:19:59] 2026-01-26 23:59:20,364 | INFO     | **************************************
[2026-01-27 01:19:59] 2026-01-26 23:59:20,867 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2026-01-27 01:19:59] 2026-01-26 23:59:20,891 | INFO     | sufficient remaining disk space (3312539664384 B)
[2026-01-27 01:19:59] 2026-01-26 23:59:20,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:19:59] 2026-01-26 23:59:20,891 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:19:59] 2026-01-26 23:59:20,891 | INFO     | update_server=False
[2026-01-27 01:19:59] 2026-01-26 23:59:20,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:19:59] 2026-01-26 23:59:20,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 01:19:59] 2026-01-26 23:59:20,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 01:19:59] 2026-01-26 23:59:20,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:19:59] 2026-01-26 23:59:20,900 | INFO     | will abort loop
[2026-01-27 01:19:59] 2026-01-26 23:59:21,144 | INFO     | all data control threads have been joined
[2026-01-27 01:19:59] 2026-01-26 23:59:21,287 | INFO     | all job control threads have been joined
[2026-01-27 01:19:59] 2026-01-26 23:59:21,897 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:21,905 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:19:59] 2026-01-26 23:59:22,149 | INFO     | [data] control thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,207 | INFO     | all payload control threads have been joined
[2026-01-27 01:19:59] 2026-01-26 23:59:22,232 | INFO     | [job] validate thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,293 | INFO     | [job] control thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,672 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:19:59] 2026-01-26 23:59:22,807 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,842 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:22,974 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:23,164 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:23,210 | INFO     | [payload] control thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:23,475 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:23,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:19:59] 2026-01-26 23:59:23,783 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:24,130 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:27,632 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:31,918 | INFO     | job.realtimelogging is not enabled
[2026-01-27 01:19:59] 2026-01-26 23:59:32,923 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:19:59] 2026-01-26 23:59:50,682 | INFO     | PID=2968755 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:19:59] 2026-01-26 23:59:50,682 | INFO     | .. there are 11 such processes running
[2026-01-27 01:19:59] 2026-01-26 23:59:50,683 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:19:59] 2026-01-26 23:59:50,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:19:59] 2026-01-26 23:59:50,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:19:59] 2026-01-27 00:00:06,026 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:19:59] 2026-01-27 00:00:07,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23081177057088)>', '<ExcThread(monitor, started 23080935364352)>']
[2026-01-27 01:19:59] 2026-01-27 00:00:07,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:19:59] 2026-01-27 00:00:07,748 | INFO     | [monitor] control thread has ended
[2026-01-27 01:19:59] 2026-01-27 00:00:12,731 | INFO     | all workflow threads have been joined
[2026-01-27 01:19:59] 2026-01-27 00:00:12,731 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:19:59] 2026-01-27 00:00:12,731 | INFO     | traces error code: 0
[2026-01-27 01:19:59] 2026-01-27 00:00:12,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:19:59] 2026-01-27 00:00:12,876 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:19:59] 2026-01-27 00:00:12,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:19:59] 2026-01-27 00:00:12,885 [wrapper] pilotpid: 2968755
[2026-01-27 01:19:59] 2026-01-27 00:00:12,889 [wrapper] Pilot exit status: 0
[2026-01-27 01:19:59] 2026-01-27 00:00:12,905 [wrapper] pandaids: 6984043231
[2026-01-27 01:19:59] 2026-01-27 00:00:13,072 [wrapper] cleanup supervisor_pilot 3225955 2968756
[2026-01-27 01:19:59] 2026-01-27 00:00:13,077 [wrapper] Test setup, not cleaning
[2026-01-27 01:19:59] 2026-01-27 00:00:13,081 [wrapper] apfmon messages muted
[2026-01-27 01:19:59] 2026-01-27 00:00:13,085 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:19:59] 2026-01-27 00:00:13,090 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:19:59]  *** Error codes and diagnostics ***
[2026-01-27 01:19:59]     "exeErrorCode": 0,
[2026-01-27 01:19:59]     "exeErrorDiag": "",
[2026-01-27 01:19:59]     "pilotErrorCode": 0,
[2026-01-27 01:19:59]     "pilotErrorDiag": "",
[2026-01-27 01:19:59]  *** Listing of results directory ***
[2026-01-27 01:19:59] total 723916
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 01:19:59] -rwx------ 1 boinc boinc     36322 Jan 26 06:14 runpilot2-wrapper.sh
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:15 queuedata.json
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc       100 Jan 26 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:19:59] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 19:54 run_atlas
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc       105 Jan 26 19:54 job.xml
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc 530276790 Jan 26 22:02 EVNT.48317909._000016.pool.root.1
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc      6687 Jan 26 22:02 init_data.xml
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc     15845 Jan 26 22:02 start_atlas.sh
[2026-01-27 01:19:59] drwxrwx--x 2 boinc boinc      4096 Jan 26 22:02 shared
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc    597747 Jan 26 22:02 input.tar.gz
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc         0 Jan 26 22:02 boinc_lockfile
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc      2497 Jan 26 22:02 pandaJob.out
[2026-01-27 01:19:59] -rw------- 1 boinc boinc   1006457 Jan 26 22:02 agis_schedconf.cvmfs.json
[2026-01-27 01:19:59] -rw------- 1 boinc boinc   1516246 Jan 26 22:02 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:19:59] -rw------- 1 boinc boinc       443 Jan 26 22:02 workernode_map.json
[2026-01-27 01:19:59] drwx------ 5 boinc boinc      4096 Jan 26 22:02 pilot3
[2026-01-27 01:19:59] -rw------- 1 boinc boinc 203419011 Jan 27 00:58 HITS.48317911._000580.pool.root.1
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc       530 Jan 27 00:58 boinc_task_state.xml
[2026-01-27 01:19:59] -rw------- 1 boinc boinc      1027 Jan 27 00:59 memory_monitor_summary.json
[2026-01-27 01:19:59] -rw------- 1 boinc boinc    345788 Jan 27 00:59 log.48317911._000580.job.log.tgz.1
[2026-01-27 01:19:59] -rw------- 1 boinc boinc      6343 Jan 27 00:59 heartbeat.json
[2026-01-27 01:19:59] -rw------- 1 boinc boinc        95 Jan 27 00:59 pilot_heartbeat.json
[2026-01-27 01:19:59] -rw------- 1 boinc boinc      5089 Jan 27 01:00 pilotlog.txt
[2026-01-27 01:19:59] -rw------- 1 boinc boinc   1480394 Jan 27 01:00 log.48317911._000580.job.log.1
[2026-01-27 01:19:59] -rw------- 1 boinc boinc       357 Jan 27 01:00 output.list
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc       620 Jan 27 01:00 runtime_log
[2026-01-27 01:19:59] -rw------- 1 boinc boinc   1843200 Jan 27 01:00 result.tar.gz
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc      9205 Jan 27 01:00 runtime_log.err
[2026-01-27 01:19:59] -rw------- 1 boinc boinc       664 Jan 27 01:00 iVXMDmJ7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwX2KDmV8vePo.diag
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc        26 Jan 27 01:19 wrapper_checkpoint.txt
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc      8192 Jan 27 01:19 boinc_mmap_file
[2026-01-27 01:19:59] -rw-r--r-- 1 boinc boinc     20816 Jan 27 01:19 stderr.txt
[2026-01-27 01:19:59] HITS file was successfully produced:
[2026-01-27 01:19:59] -rw------- 1 boinc boinc 203419011 Jan 27 00:58 shared/HITS.pool.root.1
[2026-01-27 01:19:59]  *** Contents of shared directory: ***
[2026-01-27 01:19:59] total 718912
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc 530276790 Jan 26 22:02 ATLAS.root_0
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc     15845 Jan 26 22:02 start_atlas.sh
[2026-01-27 01:19:59] -rw-r--r-- 2 boinc boinc    597747 Jan 26 22:02 input.tar.gz
[2026-01-27 01:19:59] -rw------- 1 boinc boinc 203419011 Jan 27 00:58 HITS.pool.root.1
[2026-01-27 01:19:59] -rw------- 1 boinc boinc   1843200 Jan 27 01:00 result.tar.gz
01:20:00 (2964446): run_atlas exited; CPU time 41618.808298
01:20:00 (2964446): called boinc_finish(0)

</stderr_txt>
]]>

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