Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:30:12 (7853): wrapper (7.7.26015): starting
04:30:12 (7853): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 04:30:12] Arguments: --nthreads 8
[2026-01-27 04:30:12] Threads: 8
[2026-01-27 04:30:12] Checking for CVMFS
[2026-01-27 04:30:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 04:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 04:30:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 04:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 04:30:16] 2.11.2.0 9196 60797 136928 155571 1 53 19132365 25165824 899 130560 0 21831849 99.773 18199560 2207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 04:30:16] CVMFS is ok
[2026-01-27 04:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 04:30:16] Checking for apptainer binary...
[2026-01-27 04:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 04:30:16] Running /usr/bin/apptainer --version
[2026-01-27 04:30:16] apptainer version 1.3.2-1.el7
[2026-01-27 04:30:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 04:30:34] cg-vwn422.simple-grid.lan
[2026-01-27 04:30:34] apptainer works
[2026-01-27 04:30:34] Set ATHENA_PROC_NUMBER=8
[2026-01-27 04:30:34] Set ATHENA_CORE_NUMBER=8
[2026-01-27 04:30:34] Starting ATLAS job with PandaID=6981855335
[2026-01-27 04:30:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:34:18]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:34:18] 2026-01-27 07:33:16,191 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6981855335/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,191 | INFO     | extracted standard info from prmon json
[2026-01-27 08:34:18] 2026-01-27 07:33:16,192 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:34:18] 2026-01-27 07:33:16,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:34:18] 2026-01-27 07:33:16,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:34:18] 2026-01-27 07:33:16,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:34:18] 2026-01-27 07:33:16,197 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:34:18] 2026-01-27 07:33:16,198 | INFO     | sum of square deviations: 3675146117.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,200 | INFO     | sum of deviations: 109299439764.49998
[2026-01-27 08:34:18] 2026-01-27 07:33:16,201 | INFO     | mean x: 1769492211.5
[2026-01-27 08:34:18] 2026-01-27 07:33:16,201 | INFO     | mean y: 2410800.206140351
[2026-01-27 08:34:18] 2026-01-27 07:33:16,201 | INFO     | intersect: -52622573684.07637
[2026-01-27 08:34:18] 2026-01-27 07:33:16,201 | INFO     | chi2: 8.41295845664868
[2026-01-27 08:34:18] 2026-01-27 07:33:16,202 | INFO     | sum of square deviations: 3438620752.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,204 | INFO     | sum of deviations: 121673040122.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,204 | INFO     | mean x: 1769492059.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,204 | INFO     | mean y: 2418604.7264573993
[2026-01-27 08:34:18] 2026-01-27 07:33:16,204 | INFO     | intersect: -62609743019.97237
[2026-01-27 08:34:18] 2026-01-27 07:33:16,205 | INFO     | chi2: 7.7183546958730425
[2026-01-27 08:34:18] 2026-01-27 07:33:16,205 | INFO     | current chi2=7.7183546958730425 (change=8.256355530041853 %)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,205 | INFO     | right removable region: 222
[2026-01-27 08:34:18] 2026-01-27 07:33:16,209 | INFO     | sum of square deviations: 3438620752.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,211 | INFO     | sum of deviations: 31856300047.000004
[2026-01-27 08:34:18] 2026-01-27 07:33:16,211 | INFO     | mean x: 1769492364.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,211 | INFO     | mean y: 2460692.062780269
[2026-01-27 08:34:18] 2026-01-27 07:33:16,211 | INFO     | intersect: -16390588656.480017
[2026-01-27 08:34:18] 2026-01-27 07:33:16,212 | INFO     | chi2: 3.486457087571088
[2026-01-27 08:34:18] 2026-01-27 07:33:16,212 | INFO     | current chi2=3.486457087571088 (change=58.55848919810397 %)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,212 | INFO     | sum of square deviations: 3212467674.5
[2026-01-27 08:34:18] 2026-01-27 07:33:16,214 | INFO     | sum of deviations: -24739759904.5
[2026-01-27 08:34:18] 2026-01-27 07:33:16,215 | INFO     | mean x: 1769492516.5
[2026-01-27 08:34:18] 2026-01-27 07:33:16,215 | INFO     | mean y: 2498779.9128440367
[2026-01-27 08:34:18] 2026-01-27 07:33:16,215 | INFO     | intersect: 13629661586.409594
[2026-01-27 08:34:18] 2026-01-27 07:33:16,215 | INFO     | chi2: 1.0076437022467182
[2026-01-27 08:34:18] 2026-01-27 07:33:16,216 | INFO     | current chi2=1.0076437022467182 (change=71.0983477800751 %)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,216 | INFO     | sum of square deviations: 2996454322.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,218 | INFO     | sum of deviations: -32038509304.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,218 | INFO     | mean x: 1769492669.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,218 | INFO     | mean y: 2503884.96713615
[2026-01-27 08:34:18] 2026-01-27 07:33:16,218 | INFO     | intersect: 18922167342.835888
[2026-01-27 08:34:18] 2026-01-27 07:33:16,219 | INFO     | chi2: 0.9287364130258182
[2026-01-27 08:34:18] 2026-01-27 07:33:16,219 | INFO     | current chi2=0.9287364130258182 (change=7.830872067672565 %)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,219 | INFO     | left removable region: 30
[2026-01-27 08:34:18] 2026-01-27 07:33:16,220 | INFO     | sum of square deviations: 2194675568.0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,221 | INFO     | sum of deviations: -723518102.5000007
[2026-01-27 08:34:18] 2026-01-27 07:33:16,221 | INFO     | mean x: 1769492943.5
[2026-01-27 08:34:18] 2026-01-27 07:33:16,222 | INFO     | mean y: 2500527.0052083335
[2026-01-27 08:34:18] 2026-01-27 07:33:16,222 | INFO     | intersect: 585848788.3771421
[2026-01-27 08:34:18] 2026-01-27 07:33:16,222 | INFO     | chi2: 0.04734883259367065
[2026-01-27 08:34:18] 2026-01-27 07:33:16,222 | INFO     | current memory leak: -0.33 B/s (using 192 data points, chi2=0.05)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,223 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,223 | INFO     | ..............................
[2026-01-27 08:34:18] 2026-01-27 07:33:16,223 | INFO     | . Timing measurements:
[2026-01-27 08:34:18] 2026-01-27 07:33:16,223 | INFO     | . get job = 0 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . initial setup = 119 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . payload setup = 145 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . stage-in = 0 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . payload execution = 14022 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . stage-out = 4 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | . log creation = 1 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,224 | INFO     | ..............................
[2026-01-27 08:34:18] 2026-01-27 07:33:16,482 | INFO     | time since job start (14194s) is within the limit (349056.0s)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,493 | INFO     | 
[2026-01-27 08:34:18] 2026-01-27 07:33:16,493 | INFO     | job summary report
[2026-01-27 08:34:18] 2026-01-27 07:33:16,493 | INFO     | --------------------------------------------------
[2026-01-27 08:34:18] 2026-01-27 07:33:16,493 | INFO     | PanDA job id: 6981855335
[2026-01-27 08:34:18] 2026-01-27 07:33:16,493 | INFO     | task id: 48310826
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | errors: (none)
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | pilot state: finished 
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | transexitcode: 0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | exeerrorcode: 0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | exeerrordiag: 
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | exitcode: 0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | exitmsg: OK
[2026-01-27 08:34:18] 2026-01-27 07:33:16,494 | INFO     | cpuconsumptiontime: 51942 s
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | nevents: 400
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | neventsw: 0
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | pid: 16288
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | pgrp: 16288
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | corecount: 8
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | event service: False
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | sizes: {0: 2283750, 1: 2283834, 2: 2284295, 13: 2284295, 14170: 2314799, 14171: 2314798, 14177: 2323980, 14179: 2324036, 14181: 2324230}
[2026-01-27 08:34:18] 2026-01-27 07:33:16,495 | INFO     | --------------------------------------------------
[2026-01-27 08:34:18] 2026-01-27 07:33:16,496 | INFO     | 
[2026-01-27 08:34:18] 2026-01-27 07:33:16,496 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-27 08:34:18] 2026-01-27 07:33:17,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | job 6981855335 has completed (purged errors)
[2026-01-27 08:34:18] 2026-01-27 07:33:17,035 | INFO     | overall cleanup function is called
[2026-01-27 08:34:18] 2026-01-27 07:33:18,044 | INFO     | --- collectZombieJob: --- 10, [16288]
[2026-01-27 08:34:18] 2026-01-27 07:33:18,044 | INFO     | zombie collector waiting for pid 16288
[2026-01-27 08:34:18] 2026-01-27 07:33:18,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:34:18] 2026-01-27 07:33:18,044 | INFO     | collected zombie processes
[2026-01-27 08:34:18] 2026-01-27 07:33:18,044 | INFO     | will attempt to kill all subprocesses of pid=16288
[2026-01-27 08:34:18] 2026-01-27 07:33:18,118 | INFO     | process IDs to be killed: [16288] (in reverse order)
[2026-01-27 08:34:18] 2026-01-27 07:33:19,052 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:34:18] 2026-01-27 07:33:19,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:34:18] 2026-01-27 07:33:19,055 | INFO     | did not find any defunct processes belonging to 16288
[2026-01-27 08:34:18] 2026-01-27 07:33:19,057 | INFO     | did not find any defunct processes belonging to 16288
[2026-01-27 08:34:18] 2026-01-27 07:33:19,057 | INFO     | ready for new job
[2026-01-27 08:34:18] 2026-01-27 07:33:19,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:34:18] 2026-01-27 07:33:19,059 | INFO     | **************************************
[2026-01-27 08:34:18] 2026-01-27 07:33:19,059 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:34:18] 2026-01-27 07:33:19,059 | INFO     | **************************************
[2026-01-27 08:34:18] 2026-01-27 07:33:19,059 | INFO     | 
[2026-01-27 08:34:18] 2026-01-27 07:33:19,060 | INFO     | pilot is running in a VM
[2026-01-27 08:34:18] 2026-01-27 07:33:19,060 | INFO     | architecture information:
[2026-01-27 08:34:18] 2026-01-27 07:33:19,075 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:34:18] 2026-01-27 07:33:19,377 | INFO     | cat /etc/os-release:
[2026-01-27 08:34:18] NAME="CentOS Linux"
[2026-01-27 08:34:18] VERSION="7 (Core)"
[2026-01-27 08:34:18] ID="centos"
[2026-01-27 08:34:18] ID_LIKE="rhel fedora"
[2026-01-27 08:34:18] VERSION_ID="7"
[2026-01-27 08:34:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:34:18] ANSI_COLOR="0;31"
[2026-01-27 08:34:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:34:18] HOME_URL="https://www.centos.org/"
[2026-01-27 08:34:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:34:18] 
[2026-01-27 08:34:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:34:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:34:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:34:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:34:18] 
[2026-01-27 08:34:18] 2026-01-27 07:33:19,378 | INFO     | **************************************
[2026-01-27 08:34:18] 2026-01-27 07:33:19,881 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-27 08:34:18] 2026-01-27 07:33:20,095 | INFO     | sufficient remaining disk space (495059992576 B)
[2026-01-27 08:34:18] 2026-01-27 07:33:20,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:34:18] 2026-01-27 07:33:20,096 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:34:18] 2026-01-27 07:33:20,096 | INFO     | update_server=False
[2026-01-27 08:34:18] 2026-01-27 07:33:20,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:34:18] 2026-01-27 07:33:20,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:34:18] 2026-01-27 07:33:20,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 08:34:18] 2026-01-27 07:33:20,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 08:34:18] 2026-01-27 07:33:20,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:34:18] 2026-01-27 07:33:20,244 | INFO     | will abort loop
[2026-01-27 08:34:18] 2026-01-27 07:33:20,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:34:18] 2026-01-27 07:33:20,497 | INFO     | all data control threads have been joined
[2026-01-27 08:34:18] 2026-01-27 07:33:20,528 | INFO     | all payload control threads have been joined
[2026-01-27 08:34:18] 2026-01-27 07:33:21,035 | INFO     | all job control threads have been joined
[2026-01-27 08:34:18] 2026-01-27 07:33:21,102 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,250 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:34:18] 2026-01-27 07:33:21,503 | INFO     | [data] control thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,534 | INFO     | [payload] control thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,578 | INFO     | [job] validate thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,643 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,762 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:21,917 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,007 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,041 | INFO     | [job] control thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,164 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,172 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,412 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:22,572 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:24,417 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:34:18] 2026-01-27 07:33:49,624 | INFO     | PID=11862 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 08:34:18] 2026-01-27 07:33:49,624 | INFO     | .. there are 2 such processes running
[2026-01-27 08:34:18] 2026-01-27 07:33:49,625 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:34:18] 2026-01-27 07:33:49,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:34:18] 2026-01-27 07:33:49,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:34:18] 2026-01-27 07:34:06,190 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:34:18] 2026-01-27 07:34:07,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643108869952)>', '<ExcThread(monitor, started 140642445416192)>']
[2026-01-27 08:34:18] 2026-01-27 07:34:07,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:34:18] 2026-01-27 07:34:07,733 | INFO     | [monitor] control thread has ended
[2026-01-27 08:34:18] 2026-01-27 07:34:12,293 | INFO     | all workflow threads have been joined
[2026-01-27 08:34:18] 2026-01-27 07:34:12,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:34:18] 2026-01-27 07:34:12,293 | INFO     | traces error code: 0
[2026-01-27 08:34:18] 2026-01-27 07:34:12,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:34:18] 2026-01-27 07:34:12,702 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:34:18] 2026-01-27 07:34:12,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:34:18] 2026-01-27 07:34:12,925 [wrapper] pilotpid: 11862
[2026-01-27 08:34:18] 2026-01-27 07:34:13,025 [wrapper] Pilot exit status: 0
[2026-01-27 08:34:18] 2026-01-27 07:34:13,437 [wrapper] pandaids: 6981855335
[2026-01-27 08:34:18] 2026-01-27 07:34:14,432 [wrapper] cleanup supervisor_pilot 22424 11863
[2026-01-27 08:34:18] 2026-01-27 07:34:14,555 [wrapper] Test setup, not cleaning
[2026-01-27 08:34:18] 2026-01-27 07:34:14,669 [wrapper] apfmon messages muted
[2026-01-27 08:34:18] 2026-01-27 07:34:14,789 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:34:18] 2026-01-27 07:34:14,879 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:34:18]  *** Error codes and diagnostics ***
[2026-01-27 08:34:18]     "exeErrorCode": 0,
[2026-01-27 08:34:18]     "exeErrorDiag": "",
[2026-01-27 08:34:18]     "pilotErrorCode": 0,
[2026-01-27 08:34:18]     "pilotErrorDiag": "",
[2026-01-27 08:34:18]  *** Listing of results directory ***
[2026-01-27 08:34:18] total 666900
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc    584422 Jan 24 22:51 pilot3.tar.gz
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc      5111 Jan 24 22:52 queuedata.json
[2026-01-27 08:34:18] -rwx------. 1 boinc boinc     36322 Jan 24 22:52 runpilot2-wrapper.sh
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc       100 Jan 27 04:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:34:18] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 04:30 run_atlas
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc       105 Jan 27 04:30 job.xml
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc      6390 Jan 27 04:30 init_data.xml
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc 495012967 Jan 27 04:30 EVNT.48310824._000045.pool.root.1
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc     15845 Jan 27 04:30 start_atlas.sh
[2026-01-27 08:34:18] drwxrwx--x. 2 boinc boinc        68 Jan 27 04:30 shared
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc    597757 Jan 27 04:30 input.tar.gz
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc         0 Jan 27 04:30 boinc_lockfile
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc      2522 Jan 27 04:30 pandaJob.out
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc       415 Jan 27 04:36 workernode_map.json
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc   1006433 Jan 27 04:36 agis_schedconf.cvmfs.json
[2026-01-27 08:34:18] drwx------. 5 boinc boinc      4096 Jan 27 04:36 pilot3
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc 179053231 Jan 27 08:31 HITS.48310826._006268.pool.root.1
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc       532 Jan 27 08:31 boinc_task_state.xml
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc      1011 Jan 27 08:33 memory_monitor_summary.json
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc   1516246 Jan 27 08:33 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc    462094 Jan 27 08:33 log.48310826._006268.job.log.tgz.1
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc      6311 Jan 27 08:33 heartbeat.json
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc      8192 Jan 27 08:33 boinc_mmap_file
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc        28 Jan 27 08:33 wrapper_checkpoint.txt
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc        95 Jan 27 08:33 pilot_heartbeat.json
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc      5066 Jan 27 08:34 pilotlog.txt
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc   1993726 Jan 27 08:34 log.48310826._006268.job.log.1
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc       357 Jan 27 08:34 output.list
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc       620 Jan 27 08:34 runtime_log
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc   2478080 Jan 27 08:34 result.tar.gz
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc       655 Jan 27 08:34 UaQKDm1j038n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxNzKDmO5gt9m.diag
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc      8816 Jan 27 08:34 runtime_log.err
[2026-01-27 08:34:18] -rw-r--r--. 1 boinc boinc     20747 Jan 27 08:34 stderr.txt
[2026-01-27 08:34:18] HITS file was successfully produced:
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc 179053231 Jan 27 08:31 shared/HITS.pool.root.1
[2026-01-27 08:34:18]  *** Contents of shared directory: ***
[2026-01-27 08:34:18] total 661292
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc 495012967 Jan 27 04:30 ATLAS.root_0
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc     15845 Jan 27 04:30 start_atlas.sh
[2026-01-27 08:34:18] -rw-r--r--. 2 boinc boinc    597757 Jan 27 04:30 input.tar.gz
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc 179053231 Jan 27 08:31 HITS.pool.root.1
[2026-01-27 08:34:18] -rw-------. 1 boinc boinc   2478080 Jan 27 08:34 result.tar.gz
08:34:19 (7853): run_atlas exited; CPU time 52094.642633
08:34:19 (7853): called boinc_finish(0)

</stderr_txt>
]]>

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