Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:57:09 (1380139): wrapper (7.7.26015): starting
14:57:09 (1380139): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 14:57:09] Arguments: --nthreads 12
[2026-01-27 14:57:09] Threads: 12
[2026-01-27 14:57:09] Checking for CVMFS
[2026-01-27 14:57:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 14:57:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 14:57:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 14:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 14:57:13] 2.13.1.0 2787 2842 72304 155587 2 253 2845274 4096001 1824 130560 0 4086153 99.952 330529 1213 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 14:57:13] CVMFS is ok
[2026-01-27 14:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 14:57:13] Checking for apptainer binary...
[2026-01-27 14:57:13] apptainer is not installed, using version from CVMFS
[2026-01-27 14:57:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 14:57:15] ryzen7
[2026-01-27 14:57:15] apptainer works
[2026-01-27 14:57:15] Set ATHENA_PROC_NUMBER=12
[2026-01-27 14:57:15] Set ATHENA_CORE_NUMBER=12
[2026-01-27 14:57:15] Starting ATLAS job with PandaID=6983466478
[2026-01-27 14:57:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 16:32:04]  *** The last 200 lines of the pilot log: ***
[2026-01-27 16:32:04]  filetype=log
[2026-01-27 16:32:04]  guid=82eee48d-dc93-4b2a-98d2-44b28a0b1ea5
[2026-01-27 16:32:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 16:32:04]  is_altstaged=None
[2026-01-27 16:32:04]  is_tar=False
[2026-01-27 16:32:04]  lfn=log.48329469._000097.job.log.tgz.1
[2026-01-27 16:32:04]  mtime=0
[2026-01-27 16:32:04]  protocol_id=None
[2026-01-27 16:32:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 16:32:04]  replicas=None
[2026-01-27 16:32:04]  scope=mc23_13p6TeV
[2026-01-27 16:32:04]  status=None
[2026-01-27 16:32:04]  status_code=0
[2026-01-27 16:32:04]  storage_token=
[2026-01-27 16:32:04]  surl=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983466478/log.48329469._000097.job.log.tgz.1
[2026-01-27 16:32:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c4/log.48329469._000097.job.log.tgz.1
[2026-01-27 16:32:04]  workdir=None
[2026-01-27 16:32:04] ]
[2026-01-27 16:32:04] 2026-01-27 16:31:26,951 | INFO     | transferring file log.48329469._000097.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983466478/log.48329469._000097.job.log.tgz.1 t
[2026-01-27 16:32:04] 2026-01-27 16:31:26,951 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983466478/log.48329469._000097.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-27 16:32:04] 2026-01-27 16:31:27,188 | INFO     | adding to output.list: log.48329469._000097.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/c4/log.48329469._000097.job.log.tg
[2026-01-27 16:32:04] 2026-01-27 16:31:27,189 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 16:32:04] 2026-01-27 16:31:27,189 | INFO     | summary of transferred files:
[2026-01-27 16:32:04] 2026-01-27 16:31:27,189 | INFO     |  -- lfn=log.48329469._000097.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 16:32:04] 2026-01-27 16:31:27,189 | INFO     | stage-out finished correctly
[2026-01-27 16:32:04] 2026-01-27 16:31:27,698 | INFO     | time since job start (5516s) is within the limit (349056.0s)
[2026-01-27 16:32:04] 2026-01-27 16:31:29,154 | INFO     | monitor loop #432: job 0:6983466478 is in state 'finished'
[2026-01-27 16:32:04] 2026-01-27 16:31:29,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 16:32:04] 2026-01-27 16:31:29,230 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 16:32:04] 2026-01-27 16:31:29,710 | INFO     | time since job start (5518s) is within the limit (349056.0s)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,822 | INFO     | job 6983466478 has state=finished
[2026-01-27 16:32:04] 2026-01-27 16:31:30,822 | INFO     | preparing for final server update for job 6983466478 in state='finished'
[2026-01-27 16:32:04] 2026-01-27 16:31:30,822 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983466478/jobReport.json
[2026-01-27 16:32:04] 2026-01-27 16:31:30,823 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-01-27 16:32:04] 2026-01-27 16:31:30,824 | INFO     | this job has now completed (state=finished)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,824 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,824 | INFO     | log transfer has been attempted: DONE
[2026-01-27 16:32:04] 2026-01-27 16:31:30,824 | INFO     | job 6983466478 has finished - writing final server update
[2026-01-27 16:32:04] 2026-01-27 16:31:30,824 | INFO     | total number of processed events: 400 (read)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6983466478/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | INFO     | extracted standard info from prmon json
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 16:32:04] 2026-01-27 16:31:30,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 16:32:04] 2026-01-27 16:31:30,849 | INFO     | fitting pss+swap vs Time
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | sum of square deviations: 170944600.5
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | sum of deviations: 3001002726.0
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | mean x: 1769528848.5
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | mean y: 2692975.3658536584
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | intersect: -31062113298.43126
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | chi2: 0.019009231831876257
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | current memory leak: 17.56 B/s (using 82 data points, chi2=0.02)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,850 | INFO     | could have reported an average CPU frequency of 4303 MHz (7 samples)
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | ..............................
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . Timing measurements:
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . get job = 0 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . initial setup = 47 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . payload setup = 60 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . stage-in = 0 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . payload execution = 5448 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . stage-out = 1 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | . log creation = 0 s
[2026-01-27 16:32:04] 2026-01-27 16:31:30,851 | INFO     | ..............................
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | 
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | job summary report
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | --------------------------------------------------
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | PanDA job id: 6983466478
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | task id: 48329469
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | errors: (none)
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | pilot state: finished 
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | transexitcode: 0
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | exeerrorcode: 0
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | exeerrordiag: 
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | exitcode: 0
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | exitmsg: OK
[2026-01-27 16:32:04] 2026-01-27 16:31:31,254 | INFO     | cpuconsumptiontime: 30224 s
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | nevents: 400
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | neventsw: 0
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | pid: 1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | pgrp: 1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | corecount: 12
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | event service: False
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | sizes: {0: 2283893, 1: 2284410, 5513: 2310954, 5515: 2319998, 5517: 2320054, 5519: 2320248}
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | --------------------------------------------------
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | 
[2026-01-27 16:32:04] 2026-01-27 16:31:31,255 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | job 6983466478 has completed (purged errors)
[2026-01-27 16:32:04] 2026-01-27 16:31:31,467 | INFO     | overall cleanup function is called
[2026-01-27 16:32:04] 2026-01-27 16:31:32,478 | INFO     | --- collectZombieJob: --- 10, [1388566]
[2026-01-27 16:32:04] 2026-01-27 16:31:32,478 | INFO     | zombie collector waiting for pid 1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:32,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 16:32:04] 2026-01-27 16:31:32,478 | INFO     | collected zombie processes
[2026-01-27 16:32:04] 2026-01-27 16:31:32,478 | INFO     | will attempt to kill all subprocesses of pid=1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:32,600 | INFO     | process IDs to be killed: [1388566] (in reverse order)
[2026-01-27 16:32:04] 2026-01-27 16:31:32,950 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 16:32:04] 2026-01-27 16:31:32,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 16:32:04] 2026-01-27 16:31:32,952 | INFO     | did not find any defunct processes belonging to 1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:32,958 | INFO     | did not find any defunct processes belonging to 1388566
[2026-01-27 16:32:04] 2026-01-27 16:31:32,958 | INFO     | ready for new job
[2026-01-27 16:32:04] 2026-01-27 16:31:32,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 16:32:04] 2026-01-27 16:31:32,959 | INFO     | **************************************
[2026-01-27 16:32:04] 2026-01-27 16:31:32,959 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 16:32:04] 2026-01-27 16:31:32,959 | INFO     | **************************************
[2026-01-27 16:32:04] 2026-01-27 16:31:32,959 | INFO     | 
[2026-01-27 16:32:04] 2026-01-27 16:31:32,982 | INFO     | architecture information:
[2026-01-27 16:32:04] 2026-01-27 16:31:32,986 | INFO     | executing command: cat /etc/os-release
[2026-01-27 16:32:04] 2026-01-27 16:31:33,022 | INFO     | cat /etc/os-release:
[2026-01-27 16:32:04] NAME="CentOS Linux"
[2026-01-27 16:32:04] VERSION="7 (Core)"
[2026-01-27 16:32:04] ID="centos"
[2026-01-27 16:32:04] ID_LIKE="rhel fedora"
[2026-01-27 16:32:04] VERSION_ID="7"
[2026-01-27 16:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 16:32:04] ANSI_COLOR="0;31"
[2026-01-27 16:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 16:32:04] HOME_URL="https://www.centos.org/"
[2026-01-27 16:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 16:32:04] 
[2026-01-27 16:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 16:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 16:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 16:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 16:32:04] 
[2026-01-27 16:32:04] 2026-01-27 16:31:33,022 | INFO     | **************************************
[2026-01-27 16:32:04] 2026-01-27 16:31:33,526 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | INFO     | sufficient remaining disk space (146382258176 B)
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | INFO     | update_server=False
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 16:32:04] 2026-01-27 16:31:33,630 | INFO     | aborting loop
[2026-01-27 16:32:04] 2026-01-27 16:31:33,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 16:32:04] 2026-01-27 16:31:33,838 | INFO     | all payload control threads have been joined
[2026-01-27 16:32:04] 2026-01-27 16:31:33,954 | INFO     | all data control threads have been joined
[2026-01-27 16:32:04] 2026-01-27 16:31:34,634 | INFO     | [job] retrieve thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:34,634 | INFO     | [job] job monitor thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:34,642 | INFO     | [payload] validate_post thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:34,842 | INFO     | [payload] control thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:34,866 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:34,950 | INFO     | all job control threads have been joined
[2026-01-27 16:32:04] 2026-01-27 16:31:34,958 | INFO     | [data] control thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,010 | INFO     | [data] copytool_in thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,022 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 16:32:04] 2026-01-27 16:31:35,510 | INFO     | [payload] failed_post thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,638 | INFO     | [data] copytool_out thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,794 | INFO     | [job] validate thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,906 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:35,954 | INFO     | [job] control thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:36,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 16:32:04] 2026-01-27 16:31:37,018 | INFO     | [job] queue monitor thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:39,418 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:40,006 | INFO     | [monitor] cgroup control has ended
[2026-01-27 16:32:04] 2026-01-27 16:31:44,088 | INFO     | job.realtimelogging is not enabled
[2026-01-27 16:32:04] 2026-01-27 16:31:45,094 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 16:32:04] 2026-01-27 16:31:47,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044039305024)>', '<ExcThread(monitor, started 140043372979968)>']
[2026-01-27 16:32:04] 2026-01-27 16:31:52,154 | INFO     | all workflow threads have been joined
[2026-01-27 16:32:04] 2026-01-27 16:31:52,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 16:32:04] 2026-01-27 16:31:52,154 | INFO     | traces error code: 0
[2026-01-27 16:32:04] 2026-01-27 16:31:52,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 16:32:04] 2026-01-27 16:32:02,942 | INFO     | PID=1384075 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 16:32:04] 2026-01-27 16:32:02,942 | INFO     | .. there are 3 such processes running
[2026-01-27 16:32:04] 2026-01-27 16:32:02,943 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 16:32:04] 2026-01-27 16:32:02,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 16:32:04] 2026-01-27 16:32:02,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 16:32:04] 2026-01-27 16:32:02,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 16:32:04] 2026-01-27 16:32:02,943 | INFO     | [monitor] control thread has ended
[2026-01-27 16:32:04] 2026-01-27 16:32:03,098 [wrapper] ==== pilot stdout END ====
[2026-01-27 16:32:04] 2026-01-27 16:32:03,118 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 16:32:04] 2026-01-27 16:32:03,142 [wrapper] pilotpid: 1384075
[2026-01-27 16:32:04] 2026-01-27 16:32:03,206 [wrapper] Pilot exit status: 0
[2026-01-27 16:32:04] 2026-01-27 16:32:03,366 [wrapper] pandaids: 6983466478
[2026-01-27 16:32:04] 2026-01-27 16:32:03,578 [wrapper] cleanup supervisor_pilot 1420910 1384076
[2026-01-27 16:32:04] 2026-01-27 16:32:03,594 [wrapper] Test setup, not cleaning
[2026-01-27 16:32:04] 2026-01-27 16:32:03,642 [wrapper] apfmon messages muted
[2026-01-27 16:32:04] 2026-01-27 16:32:03,694 [wrapper] ==== wrapper stdout END ====
[2026-01-27 16:32:04] 2026-01-27 16:32:03,730 [wrapper] ==== wrapper stderr END ====
[2026-01-27 16:32:04]  *** Error codes and diagnostics ***
[2026-01-27 16:32:04]     "exeErrorCode": 0,
[2026-01-27 16:32:04]     "exeErrorDiag": "",
[2026-01-27 16:32:04]     "pilotErrorCode": 0,
[2026-01-27 16:32:04]     "pilotErrorDiag": "",
[2026-01-27 16:32:04]  *** Listing of results directory ***
[2026-01-27 16:32:04] total 451624
[2026-01-27 16:32:04] -rwx------ 1 boinc boinc     36322 Jan 25 22:58 runpilot2-wrapper.sh
[2026-01-27 16:32:04] -rw-r--r-- 1 boinc boinc      5111 Jan 25 22:58 queuedata.json
[2026-01-27 16:32:04] -rw-r--r-- 1 boinc boinc    584422 Jan 25 23:00 pilot3.tar.gz
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc       100 Jan 27 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 16:32:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 14:57 run_atlas
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc       105 Jan 27 14:57 job.xml
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:57 start_atlas.sh
[2026-01-27 16:32:04] drwxrwx--x 2 boinc boinc      4096 Jan 27 14:57 shared
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc    597769 Jan 27 14:57 input.tar.gz
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc      6935 Jan 27 14:57 init_data.xml
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc 267749558 Jan 27 14:57 EVNT.48329467._000004.pool.root.1
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc         0 Jan 27 14:57 boinc_setup_complete
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc         0 Jan 27 14:57 boinc_lockfile
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc      2611 Jan 27 14:57 pandaJob.out
[2026-01-27 16:32:04] -rw------- 1 boinc boinc   1004450 Jan 27 14:58 agis_schedconf.cvmfs.json
[2026-01-27 16:32:04] -rw------- 1 boinc boinc   1516246 Jan 27 14:58 agis_ddmendpoints.agis.ALL.json
[2026-01-27 16:32:04] -rw------- 1 boinc boinc       414 Jan 27 14:59 workernode_map.json
[2026-01-27 16:32:04] drwx------ 5 boinc boinc      4096 Jan 27 14:59 pilot3
[2026-01-27 16:32:04] -rw------- 1 boinc boinc 188290606 Jan 27 16:30 HITS.48329469._000097.pool.root.1
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc       529 Jan 27 16:30 boinc_task_state.xml
[2026-01-27 16:32:04] -rw------- 1 boinc boinc      1015 Jan 27 16:31 memory_monitor_summary.json
[2026-01-27 16:32:04] -rw------- 1 boinc boinc    408258 Jan 27 16:31 log.48329469._000097.job.log.tgz.1
[2026-01-27 16:32:04] -rw------- 1 boinc boinc      6265 Jan 27 16:31 heartbeat.json
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc        27 Jan 27 16:31 wrapper_checkpoint.txt
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc      8192 Jan 27 16:31 boinc_mmap_file
[2026-01-27 16:32:04] -rw------- 1 boinc boinc       822 Jan 27 16:32 pilotlog.txt
[2026-01-27 16:32:04] -rw------- 1 boinc boinc        95 Jan 27 16:32 pilot_heartbeat.json
[2026-01-27 16:32:04] -rw------- 1 boinc boinc    832148 Jan 27 16:32 log.48329469._000097.job.log.1
[2026-01-27 16:32:04] -rw------- 1 boinc boinc       357 Jan 27 16:32 output.list
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc       620 Jan 27 16:32 runtime_log
[2026-01-27 16:32:04] -rw------- 1 boinc boinc   1259520 Jan 27 16:32 result.tar.gz
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc      9156 Jan 27 16:32 runtime_log.err
[2026-01-27 16:32:04] -rw------- 1 boinc boinc       648 Jan 27 16:32 DvdMDmhEO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXe8KDmPtvcAo.diag
[2026-01-27 16:32:04] -rw-rw-r-- 1 boinc boinc     21127 Jan 27 16:32 stderr.txt
[2026-01-27 16:32:04] HITS file was successfully produced:
[2026-01-27 16:32:04] -rw------- 1 boinc boinc 188290606 Jan 27 16:30 shared/HITS.pool.root.1
[2026-01-27 16:32:04]  *** Contents of shared directory: ***
[2026-01-27 16:32:04] total 447196
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:57 start_atlas.sh
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc    597769 Jan 27 14:57 input.tar.gz
[2026-01-27 16:32:04] -rw-r--r-- 2 boinc boinc 267749558 Jan 27 14:57 ATLAS.root_0
[2026-01-27 16:32:04] -rw------- 1 boinc boinc 188290606 Jan 27 16:30 HITS.pool.root.1
[2026-01-27 16:32:04] -rw------- 1 boinc boinc   1259520 Jan 27 16:32 result.tar.gz
16:32:06 (1380139): run_atlas exited; CPU time 30256.640392
16:32:06 (1380139): called boinc_finish(0)

</stderr_txt>
]]>

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