Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:42:53 (4189815): wrapper (7.7.26015): starting
05:42:53 (4189815): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 05:42:53] Arguments: --nthreads 4
[2026-01-28 05:42:53] Threads: 4
[2026-01-28 05:42:53] Checking for CVMFS
[2026-01-28 05:42:53] No cvmfs_config command found, will try listing directly
[2026-01-28 05:42:53] CVMFS is ok
[2026-01-28 05:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 05:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 05:42:53] Further information can be found at the LHC@home message board.
[2026-01-28 05:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 05:42:53] Checking for apptainer binary...
[2026-01-28 05:42:53] which: no apptainer in ((null))
[2026-01-28 05:42:53] apptainer is not installed, using version from CVMFS
[2026-01-28 05:42:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 05:42:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-28 05:42:53] apptainer works
[2026-01-28 05:42:53] Set ATHENA_PROC_NUMBER=4
[2026-01-28 05:42:53] Set ATHENA_CORE_NUMBER=4
[2026-01-28 05:42:53] Starting ATLAS job with PandaID=6983467942
[2026-01-28 05:42:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 08:28:09]  *** The last 200 lines of the pilot log: ***
[2026-01-28 08:28:09] 2026-01-28 07:20:44,871 | INFO     | mean x: 1769580119.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,871 | INFO     | mean y: 2332958.477419355
[2026-01-28 08:28:09] 2026-01-28 07:20:44,871 | INFO     | intersect: 8547327375.170456
[2026-01-28 08:28:09] 2026-01-28 07:20:44,871 | INFO     | chi2: 2.1121323709591744
[2026-01-28 08:28:09] 2026-01-28 07:20:44,872 | INFO     | sum of square deviations: 1046484737.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | sum of deviations: 4168991655.500002
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | mean x: 1769579966.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | mean y: 2346338.2733333334
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | intersect: -7047316069.324344
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | chi2: 1.324919118273086
[2026-01-28 08:28:09] 2026-01-28 07:20:44,873 | INFO     | current chi2=1.324919118273086 (change=37.27101878224585 %)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,874 | INFO     | sum of square deviations: 945282840.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,874 | INFO     | sum of deviations: 4079670911.0000024
[2026-01-28 08:28:09] 2026-01-28 07:20:44,874 | INFO     | mean x: 1769579814.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | mean y: 2346203.6965517243
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | intersect: -7634842356.574568
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | chi2: 1.32579473262916
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | current chi2=1.32579473262916 (change=-0.06608813655095097 %)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | right removable region: 144
[2026-01-28 08:28:09] 2026-01-28 07:20:44,875 | INFO     | sum of square deviations: 1046484737.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,876 | INFO     | sum of deviations: -22592975497.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,876 | INFO     | mean x: 1769580271.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,877 | INFO     | mean y: 2356467.26
[2026-01-28 08:28:09] 2026-01-28 07:20:44,877 | INFO     | intersect: 38206529239.40126
[2026-01-28 08:28:09] 2026-01-28 07:20:44,877 | INFO     | chi2: 0.8840299791415968
[2026-01-28 08:28:09] 2026-01-28 07:20:44,877 | INFO     | current chi2=0.8840299791415968 (change=58.145143207092865 %)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,878 | INFO     | sum of square deviations: 945282840.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,878 | INFO     | sum of deviations: -19228515404.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,878 | INFO     | mean x: 1769580424.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | mean y: 2351387.8
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | intersect: 35998354913.58161
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | chi2: 0.8789036534247604
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | current chi2=0.8789036534247604 (change=0.5798814336380398 %)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | left removable region: 20
[2026-01-28 08:28:09] 2026-01-28 07:20:44,879 | INFO     | sum of square deviations: 591173875.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,880 | INFO     | sum of deviations: -2562726022.0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,880 | INFO     | mean x: 1769580393.5
[2026-01-28 08:28:09] 2026-01-28 07:20:44,880 | INFO     | mean y: 2353850.0967741935
[2026-01-28 08:28:09] 2026-01-28 07:20:44,880 | INFO     | intersect: 7673446762.386665
[2026-01-28 08:28:09] 2026-01-28 07:20:44,881 | INFO     | chi2: 0.030775544641153174
[2026-01-28 08:28:09] 2026-01-28 07:20:44,881 | INFO     | current memory leak: -4.33 B/s (using 124 data points, chi2=0.03)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,881 | INFO     | could have reported an average CPU frequency of 2706 MHz (9 samples)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,881 | INFO     | ..............................
[2026-01-28 08:28:09] 2026-01-28 07:20:44,881 | INFO     | . Timing measurements:
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . get job = 0 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . initial setup = 7 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . payload setup = 8 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . stage-in = 0 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . payload execution = 9423 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . stage-out = 0 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | . log creation = 0 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,882 | INFO     | ..............................
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | 
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | job summary report
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | --------------------------------------------------
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | PanDA job id: 6983467942
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | task id: 48318034
[2026-01-28 08:28:09] 2026-01-28 07:20:44,979 | INFO     | errors: (none)
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | pilot state: finished 
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | transexitcode: 0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | exeerrorcode: 0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | exeerrordiag: 
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | exitcode: 0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | exitmsg: OK
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | cpuconsumptiontime: 36019 s
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | nevents: 400
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | neventsw: 0
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | pid: 6616
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | pgrp: 6616
[2026-01-28 08:28:09] 2026-01-28 07:20:44,980 | INFO     | corecount: 4
[2026-01-28 08:28:09] 2026-01-28 07:20:44,981 | INFO     | event service: False
[2026-01-28 08:28:09] 2026-01-28 07:20:44,981 | INFO     | sizes: {0: 2283780, 1: 2284241, 11: 2284241, 9436: 2312954, 9437: 2322032, 9438: 2322234}
[2026-01-28 08:28:09] 2026-01-28 07:20:44,981 | INFO     | --------------------------------------------------
[2026-01-28 08:28:09] 2026-01-28 07:20:44,981 | INFO     | 
[2026-01-28 08:28:09] 2026-01-28 07:20:44,981 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2026-01-28 08:28:09] 2026-01-28 07:20:45,013 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,013 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,013 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,013 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | job 6983467942 has completed (purged errors)
[2026-01-28 08:28:09] 2026-01-28 07:20:45,015 | INFO     | overall cleanup function is called
[2026-01-28 08:28:09] 2026-01-28 07:20:46,024 | INFO     | --- collectZombieJob: --- 10, [6616]
[2026-01-28 08:28:09] 2026-01-28 07:20:46,024 | INFO     | zombie collector waiting for pid 6616
[2026-01-28 08:28:09] 2026-01-28 07:20:46,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 08:28:09] 2026-01-28 07:20:46,025 | INFO     | collected zombie processes
[2026-01-28 08:28:09] 2026-01-28 07:20:46,025 | INFO     | will attempt to kill all subprocesses of pid=6616
[2026-01-28 08:28:09] 2026-01-28 07:20:46,705 | INFO     | process IDs to be killed: [6616] (in reverse order)
[2026-01-28 08:28:09] 2026-01-28 07:20:46,945 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 08:28:09] 2026-01-28 07:20:46,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 08:28:09] 2026-01-28 07:20:46,976 | INFO     | did not find any defunct processes belonging to 6616
[2026-01-28 08:28:09] 2026-01-28 07:20:47,007 | INFO     | did not find any defunct processes belonging to 6616
[2026-01-28 08:28:09] 2026-01-28 07:20:47,007 | INFO     | ready for new job
[2026-01-28 08:28:09] 2026-01-28 07:20:47,007 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 08:28:09] 2026-01-28 07:20:47,010 | INFO     | **************************************
[2026-01-28 08:28:09] 2026-01-28 07:20:47,010 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 08:28:09] 2026-01-28 07:20:47,010 | INFO     | **************************************
[2026-01-28 08:28:09] 2026-01-28 07:20:47,010 | INFO     | 
[2026-01-28 08:28:09] 2026-01-28 07:20:47,018 | INFO     | architecture information:
[2026-01-28 08:28:09] 2026-01-28 07:20:47,019 | INFO     | executing command: cat /etc/os-release
[2026-01-28 08:28:09] 2026-01-28 07:20:47,043 | INFO     | cat /etc/os-release:
[2026-01-28 08:28:09] NAME="CentOS Linux"
[2026-01-28 08:28:09] VERSION="7 (Core)"
[2026-01-28 08:28:09] ID="centos"
[2026-01-28 08:28:09] ID_LIKE="rhel fedora"
[2026-01-28 08:28:09] VERSION_ID="7"
[2026-01-28 08:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 08:28:09] ANSI_COLOR="0;31"
[2026-01-28 08:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 08:28:09] HOME_URL="https://www.centos.org/"
[2026-01-28 08:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 08:28:09] 
[2026-01-28 08:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 08:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 08:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 08:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 08:28:09] 
[2026-01-28 08:28:09] 2026-01-28 07:20:47,043 | INFO     | **************************************
[2026-01-28 08:28:09] 2026-01-28 07:20:47,547 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-28 08:28:09] 2026-01-28 07:20:47,573 | INFO     | sufficient remaining disk space (3304445706240 B)
[2026-01-28 08:28:09] 2026-01-28 07:20:47,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 08:28:09] 2026-01-28 07:20:47,574 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 08:28:09] 2026-01-28 07:20:47,574 | INFO     | update_server=False
[2026-01-28 08:28:09] 2026-01-28 07:20:47,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 08:28:09] 2026-01-28 07:20:47,781 | INFO     | all data control threads have been joined
[2026-01-28 08:28:09] 2026-01-28 07:20:47,983 | INFO     | all job control threads have been joined
[2026-01-28 08:28:09] 2026-01-28 07:20:48,580 | INFO     | [job] retrieve thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:48,597 | WARNING  | process 6616 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 08:28:09] 2026-01-28 07:20:48,789 | INFO     | [data] control thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:48,789 | INFO     | all payload control threads have been joined
[2026-01-28 08:28:09] 2026-01-28 07:20:48,989 | INFO     | [job] control thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 08:28:09] 2026-01-28 07:20:49,220 | INFO     | [job] validate thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,233 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 08:28:09] 2026-01-28 07:20:49,234 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 08:28:09] 2026-01-28 07:20:49,234 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-28 08:28:09] 2026-01-28 07:20:49,234 | WARNING  | maxPSS not found in memory monitor output
[2026-01-28 08:28:09] 2026-01-28 07:20:49,235 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6983467942/payload.stdout) since it has not been created yet
[2026-01-28 08:28:09] 2026-01-28 07:20:49,235 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-28 08:28:09] 2026-01-28 07:20:49,257 | INFO     | sufficient remaining disk space (3304442560512 B)
[2026-01-28 08:28:09] 2026-01-28 07:20:49,258 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-28 08:28:09] 2026-01-28 07:20:49,258 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6983467942/HITS.48318034._001980.pool.root.1 since it does not exist
[2026-01-28 08:28:09] 2026-01-28 07:20:49,289 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,396 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,420 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,721 | INFO     | [payload] failed_post thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,795 | INFO     | [payload] control thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,826 | INFO     | [data] copytool_in thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:49,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 08:28:09] 2026-01-28 07:20:49,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 08:28:09] 2026-01-28 07:20:50,032 | INFO     | number of running child processes to parent process 6616: 1
[2026-01-28 08:28:09] 2026-01-28 07:20:50,032 | INFO     | maximum number of monitored processes: 6
[2026-01-28 08:28:09] 2026-01-28 07:20:50,032 | INFO     | aborting job monitoring since job object (job id=6983467942) has expired
[2026-01-28 08:28:09] 2026-01-28 07:20:50,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 08:28:09] 2026-01-28 07:20:50,032 | INFO     | will abort loop
[2026-01-28 08:28:09] 2026-01-28 07:20:50,108 | INFO     | [payload] validate_post thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:50,992 | INFO     | [job] queue monitor thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:51,038 | INFO     | [job] job monitor thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:51,068 | INFO     | [data] copytool_out thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:20:53,860 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 08:28:09] 2026-01-28 07:21:17,362 | INFO     | PID=4194177 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 08:28:09] 2026-01-28 07:21:17,362 | INFO     | .. there are 7 such processes running
[2026-01-28 08:28:09] 2026-01-28 07:21:17,362 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 08:28:09] 2026-01-28 07:21:17,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 08:28:09] 2026-01-28 07:21:17,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 08:28:09] 2026-01-28 07:21:30,150 | INFO     | [monitor] cgroup control has ended
[2026-01-28 08:28:09] 2026-01-28 07:21:31,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23160330143552)>', '<ExcThread(monitor, started 23160083969792)>']
[2026-01-28 08:28:09] 2026-01-28 07:21:32,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 08:28:09] 2026-01-28 07:21:32,433 | INFO     | [monitor] control thread has ended
[2026-01-28 08:28:09] 2026-01-28 07:21:36,537 | INFO     | all workflow threads have been joined
[2026-01-28 08:28:09] 2026-01-28 07:21:36,537 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 08:28:09] 2026-01-28 07:21:36,537 | INFO     | traces error code: 0
[2026-01-28 08:28:09] 2026-01-28 07:21:36,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 08:28:09] 2026-01-28 07:21:36,696 [wrapper] ==== pilot stdout END ====
[2026-01-28 08:28:09] 2026-01-28 07:21:36,701 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 08:28:09] 2026-01-28 07:21:36,705 [wrapper] pilotpid: 4194177
[2026-01-28 08:28:09] 2026-01-28 07:21:36,708 [wrapper] Pilot exit status: 0
[2026-01-28 08:28:09] 2026-01-28 07:21:36,723 [wrapper] pandaids: 6983467942
[2026-01-28 08:28:09] 2026-01-28 07:21:36,894 [wrapper] cleanup supervisor_pilot  162171 4194178
[2026-01-28 08:28:09] 2026-01-28 07:21:36,898 [wrapper] Test setup, not cleaning
[2026-01-28 08:28:09] 2026-01-28 07:21:36,902 [wrapper] apfmon messages muted
[2026-01-28 08:28:09] 2026-01-28 07:21:36,906 [wrapper] ==== wrapper stdout END ====
[2026-01-28 08:28:09] 2026-01-28 07:21:36,910 [wrapper] ==== wrapper stderr END ====
[2026-01-28 08:28:09]  *** Error codes and diagnostics ***
[2026-01-28 08:28:09]     "exeErrorCode": 0,
[2026-01-28 08:28:09]     "exeErrorDiag": "",
[2026-01-28 08:28:09]     "pilotErrorCode": 0,
[2026-01-28 08:28:09]     "pilotErrorDiag": "",
[2026-01-28 08:28:09]  *** Listing of results directory ***
[2026-01-28 08:28:09] total 676152
[2026-01-28 08:28:09] -rwx------ 1 boinc boinc     36322 Jan 25 23:57 runpilot2-wrapper.sh
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc      5111 Jan 25 23:58 queuedata.json
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc    584422 Jan 26 00:00 pilot3.tar.gz
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc       100 Jan 28 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 08:28:09] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 05:42 run_atlas
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc       105 Jan 28 05:42 job.xml
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc      6692 Jan 28 05:42 init_data.xml
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc 502906573 Jan 28 05:42 EVNT.48318032._000048.pool.root.1
[2026-01-28 08:28:09] drwxrwx--x 2 boinc boinc      4096 Jan 28 05:42 shared
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc    597763 Jan 28 05:42 input.tar.gz
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc     15845 Jan 28 05:42 start_atlas.sh
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc         0 Jan 28 05:42 boinc_lockfile
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc      2533 Jan 28 05:42 pandaJob.out
[2026-01-28 08:28:09] -rw------- 1 boinc boinc   1005256 Jan 28 05:43 agis_schedconf.cvmfs.json
[2026-01-28 08:28:09] -rw------- 1 boinc boinc   1516246 Jan 28 05:43 agis_ddmendpoints.agis.ALL.json
[2026-01-28 08:28:09] -rw------- 1 boinc boinc       443 Jan 28 05:43 workernode_map.json
[2026-01-28 08:28:09] drwx------ 5 boinc boinc      4096 Jan 28 05:43 pilot3
[2026-01-28 08:28:09] -rw------- 1 boinc boinc 182168702 Jan 28 08:20 HITS.48318034._001980.pool.root.1
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc       529 Jan 28 08:20 boinc_task_state.xml
[2026-01-28 08:28:09] -rw------- 1 boinc boinc        95 Jan 28 08:20 pilot_heartbeat.json
[2026-01-28 08:28:09] -rw------- 1 boinc boinc      1038 Jan 28 08:20 memory_monitor_summary.json
[2026-01-28 08:28:09] -rw------- 1 boinc boinc    356632 Jan 28 08:20 log.48318034._001980.job.log.tgz.1
[2026-01-28 08:28:09] -rw------- 1 boinc boinc      6340 Jan 28 08:20 heartbeat.json
[2026-01-28 08:28:09] -rw------- 1 boinc boinc      6373 Jan 28 08:21 pilotlog.txt
[2026-01-28 08:28:09] -rw------- 1 boinc boinc   1323896 Jan 28 08:21 log.48318034._001980.job.log.1
[2026-01-28 08:28:09] -rw------- 1 boinc boinc       357 Jan 28 08:21 output.list
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc       620 Jan 28 08:21 runtime_log
[2026-01-28 08:28:09] -rw------- 1 boinc boinc   1699840 Jan 28 08:21 result.tar.gz
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc      9221 Jan 28 08:21 runtime_log.err
[2026-01-28 08:28:09] -rw------- 1 boinc boinc       662 Jan 28 08:21 Jc3LDmWEO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9b8KDmeitFTm.diag
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc        26 Jan 28 08:27 wrapper_checkpoint.txt
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc      8192 Jan 28 08:28 boinc_mmap_file
[2026-01-28 08:28:09] -rw-r--r-- 1 boinc boinc     21201 Jan 28 08:28 stderr.txt
[2026-01-28 08:28:09] HITS file was successfully produced:
[2026-01-28 08:28:09] -rw------- 1 boinc boinc 182168702 Jan 28 08:20 shared/HITS.pool.root.1
[2026-01-28 08:28:09]  *** Contents of shared directory: ***
[2026-01-28 08:28:09] total 671288
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc 502906573 Jan 28 05:42 ATLAS.root_0
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc    597763 Jan 28 05:42 input.tar.gz
[2026-01-28 08:28:09] -rw-r--r-- 2 boinc boinc     15845 Jan 28 05:42 start_atlas.sh
[2026-01-28 08:28:09] -rw------- 1 boinc boinc 182168702 Jan 28 08:20 HITS.pool.root.1
[2026-01-28 08:28:09] -rw------- 1 boinc boinc   1699840 Jan 28 08:21 result.tar.gz
08:28:10 (4189815): run_atlas exited; CPU time 36671.783136
08:28:10 (4189815): called boinc_finish(0)

</stderr_txt>
]]>

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