Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:43 (334570): wrapper (7.7.26015): starting
15:21:43 (334570): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 15:21:43] Arguments: --nthreads 8
[2026-01-26 15:21:43] Threads: 8
[2026-01-26 15:21:43] Checking for CVMFS
[2026-01-26 15:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:21:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:21:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:21:46] 2.13.3.0 7202 46227 102700 155561 1 17 23642619 40960000 10554 16776704 0 28515269 99.630 29209651 32689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 15:21:46] CVMFS is ok
[2026-01-26 15:21:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 15:21:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 15:21:46] Further information can be found at the LHC@home message board.
[2026-01-26 15:21:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:21:46] Checking for apptainer binary...
[2026-01-26 15:21:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:21:46] Running /usr/bin/apptainer --version
[2026-01-26 15:21:46] apptainer version 1.4.5-2.el9
[2026-01-26 15:21:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:21:46] c-211-10.aglt2.org
[2026-01-26 15:21:46] apptainer works
[2026-01-26 15:21:46] Set ATHENA_PROC_NUMBER=8
[2026-01-26 15:21:46] Set ATHENA_CORE_NUMBER=8
[2026-01-26 15:21:47] Starting ATLAS job with PandaID=6983466822
[2026-01-26 15:21:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:47:46 (1007153): wrapper (7.7.26015): starting
22:47:46 (1007153): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 22:47:46] Arguments: --nthreads 8
[2026-01-26 22:47:46] Threads: 8
[2026-01-26 22:47:46] This job has been restarted, cleaning up previous attempt
[2026-01-26 22:47:46] Checking for CVMFS
[2026-01-26 22:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:47:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:47:47] 2.13.3.0 7202 46673 103624 155571 0 58 26553159 40960000 7869 16776704 0 28734450 99.624 30931678 33526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 22:47:47] CVMFS is ok
[2026-01-26 22:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:47:47] Further information can be found at the LHC@home message board.
[2026-01-26 22:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:47:47] Checking for apptainer binary...
[2026-01-26 22:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:47:47] Running /usr/bin/apptainer --version
[2026-01-26 22:47:47] apptainer version 1.4.5-2.el9
[2026-01-26 22:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:47:47] c-211-10.aglt2.org
[2026-01-26 22:47:47] apptainer works
[2026-01-26 22:47:47] Set ATHENA_PROC_NUMBER=8
[2026-01-26 22:47:47] Set ATHENA_CORE_NUMBER=8
[2026-01-26 22:47:47] Starting ATLAS job with PandaID=6983466822
[2026-01-26 22:47:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:26:13]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:26:13] 2026-01-27 13:25:21,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,268 | INFO     | log transfer has been attempted: DONE
[2026-01-27 08:26:13] 2026-01-27 13:25:21,300 | INFO     | job 6983466822 has finished - writing final server update
[2026-01-27 08:26:13] 2026-01-27 13:25:21,301 | INFO     | total number of processed events: 400 (read)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,363 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983466822/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,364 | INFO     | extracted standard info from prmon json
[2026-01-27 08:26:13] 2026-01-27 13:25:21,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:26:13] 2026-01-27 13:25:21,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:26:13] 2026-01-27 13:25:21,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:26:13] 2026-01-27 13:25:21,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:26:13] 2026-01-27 13:25:21,418 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:26:13] 2026-01-27 13:25:21,446 | INFO     | sum of square deviations: 56822539192.97882
[2026-01-27 08:26:13] 2026-01-27 13:25:21,453 | INFO     | sum of deviations: 56379717300.35907
[2026-01-27 08:26:13] 2026-01-27 13:25:21,454 | INFO     | mean x: 1769502995.6514084
[2026-01-27 08:26:13] 2026-01-27 13:25:21,454 | INFO     | mean y: 2511039.926056338
[2026-01-27 08:26:13] 2026-01-27 13:25:21,454 | INFO     | intersect: -1753202099.1533053
[2026-01-27 08:26:13] 2026-01-27 13:25:21,455 | INFO     | chi2: 2.224827767880768
[2026-01-27 08:26:13] 2026-01-27 13:25:21,456 | INFO     | sum of square deviations: 55335271713.61272
[2026-01-27 08:26:13] 2026-01-27 13:25:21,463 | INFO     | sum of deviations: 91521135927.01955
[2026-01-27 08:26:13] 2026-01-27 13:25:21,463 | INFO     | mean x: 1769502843.159858
[2026-01-27 08:26:13] 2026-01-27 13:25:21,463 | INFO     | mean y: 2514616.7442273535
[2026-01-27 08:26:13] 2026-01-27 13:25:21,464 | INFO     | intersect: -2924134249.6467414
[2026-01-27 08:26:13] 2026-01-27 13:25:21,464 | INFO     | chi2: 1.5343179982336057
[2026-01-27 08:26:13] 2026-01-27 13:25:21,465 | INFO     | current chi2=1.5343179982336057 (change=31.036549418155584 %)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,465 | INFO     | sum of square deviations: 53874224869.32646
[2026-01-27 08:26:13] 2026-01-27 13:25:21,473 | INFO     | sum of deviations: 90158203290.4445
[2026-01-27 08:26:13] 2026-01-27 13:25:21,473 | INFO     | mean x: 1769502690.670251
[2026-01-27 08:26:13] 2026-01-27 13:25:21,473 | INFO     | mean y: 2514474.611111111
[2026-01-27 08:26:13] 2026-01-27 13:25:21,473 | INFO     | intersect: -2958738029.6317687
[2026-01-27 08:26:13] 2026-01-27 13:25:21,474 | INFO     | chi2: 1.5344146648298291
[2026-01-27 08:26:13] 2026-01-27 13:25:21,474 | INFO     | current chi2=1.5344146648298291 (change=-0.0063002973526162815 %)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,474 | INFO     | right removable region: 557
[2026-01-27 08:26:13] 2026-01-27 13:25:21,475 | INFO     | sum of square deviations: 55334907176.29133
[2026-01-27 08:26:13] 2026-01-27 13:25:21,482 | INFO     | sum of deviations: -35587169157.849014
[2026-01-27 08:26:13] 2026-01-27 13:25:21,482 | INFO     | mean x: 1769503148.1616342
[2026-01-27 08:26:13] 2026-01-27 13:25:21,482 | INFO     | mean y: 2520434.053285968
[2026-01-27 08:26:13] 2026-01-27 13:25:21,483 | INFO     | intersect: 1140529171.618407
[2026-01-27 08:26:13] 2026-01-27 13:25:21,483 | INFO     | chi2: 0.7664393441276922
[2026-01-27 08:26:13] 2026-01-27 13:25:21,484 | INFO     | current chi2=0.7664393441276922 (change=65.55062125740392 %)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,484 | INFO     | sum of square deviations: 53873495797.32644
[2026-01-27 08:26:13] 2026-01-27 13:25:21,492 | INFO     | sum of deviations: -48697532775.05734
[2026-01-27 08:26:13] 2026-01-27 13:25:21,492 | INFO     | mean x: 1769503300.670251
[2026-01-27 08:26:13] 2026-01-27 13:25:21,492 | INFO     | mean y: 2521802.1953405016
[2026-01-27 08:26:13] 2026-01-27 13:25:21,492 | INFO     | intersect: 1602017875.4432554
[2026-01-27 08:26:13] 2026-01-27 13:25:21,493 | INFO     | chi2: 0.7462073340520727
[2026-01-27 08:26:13] 2026-01-27 13:25:21,493 | INFO     | current chi2=0.7462073340520727 (change=2.639740539239428 %)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,493 | INFO     | left removable region: 20
[2026-01-27 08:26:13] 2026-01-27 13:25:21,494 | INFO     | sum of square deviations: 48017245646.469215
[2026-01-27 08:26:13] 2026-01-27 13:25:21,501 | INFO     | sum of deviations: 8323254724.603356
[2026-01-27 08:26:13] 2026-01-27 13:25:21,501 | INFO     | mean x: 1769503270.1955307
[2026-01-27 08:26:13] 2026-01-27 13:25:21,501 | INFO     | mean y: 2523026.9180633146
[2026-01-27 08:26:13] 2026-01-27 13:25:21,501 | INFO     | intersect: -304200656.53292644
[2026-01-27 08:26:13] 2026-01-27 13:25:21,502 | INFO     | chi2: 0.021521939812592733
[2026-01-27 08:26:13] 2026-01-27 13:25:21,502 | INFO     | current memory leak: 0.17 B/s (using 537 data points, chi2=0.02)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,503 | INFO     | could have reported an average CPU frequency of 2591 MHz (23 samples)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,503 | INFO     | ..............................
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . Timing measurements:
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . get job = 0 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . initial setup = 2 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . payload setup = 9 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . stage-in = 0 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . payload execution = 34617 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . stage-out = 2 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | . log creation = 0 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,504 | INFO     | ..............................
[2026-01-27 08:26:13] 2026-01-27 13:25:21,606 | INFO     | 
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | job summary report
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | --------------------------------------------------
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | PanDA job id: 6983466822
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | task id: 48318034
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | errors: (none)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | pilot state: finished 
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | transexitcode: 0
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | exeerrorcode: 0
[2026-01-27 08:26:13] 2026-01-27 13:25:21,607 | INFO     | exeerrordiag: 
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | exitcode: 0
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | exitmsg: OK
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | cpuconsumptiontime: 56779 s
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | nevents: 400
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | neventsw: 0
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | pid: 1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | pgrp: 1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | corecount: 8
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | event service: False
[2026-01-27 08:26:13] 2026-01-27 13:25:21,608 | INFO     | sizes: {0: 2269161, 1: 2284229, 34631: 2324246, 34632: 2324245, 34636: 2333355, 34639: 2333521}
[2026-01-27 08:26:13] 2026-01-27 13:25:21,609 | INFO     | --------------------------------------------------
[2026-01-27 08:26:13] 2026-01-27 13:25:21,609 | INFO     | 
[2026-01-27 08:26:13] 2026-01-27 13:25:21,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-27 08:26:13] 2026-01-27 13:25:21,719 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | job 6983466822 has completed (purged errors)
[2026-01-27 08:26:13] 2026-01-27 13:25:21,722 | INFO     | overall cleanup function is called
[2026-01-27 08:26:13] 2026-01-27 13:25:22,763 | INFO     | --- collectZombieJob: --- 10, [1019360]
[2026-01-27 08:26:13] 2026-01-27 13:25:22,764 | INFO     | zombie collector waiting for pid 1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:22,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:26:13] 2026-01-27 13:25:22,764 | INFO     | collected zombie processes
[2026-01-27 08:26:13] 2026-01-27 13:25:22,764 | INFO     | will attempt to kill all subprocesses of pid=1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:23,262 | INFO     | process IDs to be killed: [1019360] (in reverse order)
[2026-01-27 08:26:13] 2026-01-27 13:25:23,386 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:26:13] 2026-01-27 13:25:23,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:26:13] 2026-01-27 13:25:23,395 | INFO     | did not find any defunct processes belonging to 1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:23,402 | INFO     | did not find any defunct processes belonging to 1019360
[2026-01-27 08:26:13] 2026-01-27 13:25:23,402 | INFO     | ready for new job
[2026-01-27 08:26:13] 2026-01-27 13:25:23,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:26:13] 2026-01-27 13:25:23,405 | INFO     | **************************************
[2026-01-27 08:26:13] 2026-01-27 13:25:23,405 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:26:13] 2026-01-27 13:25:23,405 | INFO     | **************************************
[2026-01-27 08:26:13] 2026-01-27 13:25:23,406 | INFO     | 
[2026-01-27 08:26:13] 2026-01-27 13:25:23,408 | INFO     | architecture information:
[2026-01-27 08:26:13] 2026-01-27 13:25:23,409 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:26:13] 2026-01-27 13:25:23,423 | INFO     | cat /etc/os-release:
[2026-01-27 08:26:13] NAME="CentOS Linux"
[2026-01-27 08:26:13] VERSION="7 (Core)"
[2026-01-27 08:26:13] ID="centos"
[2026-01-27 08:26:13] ID_LIKE="rhel fedora"
[2026-01-27 08:26:13] VERSION_ID="7"
[2026-01-27 08:26:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:26:13] ANSI_COLOR="0;31"
[2026-01-27 08:26:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:26:13] HOME_URL="https://www.centos.org/"
[2026-01-27 08:26:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:26:13] 
[2026-01-27 08:26:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:26:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:26:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:26:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:26:13] 
[2026-01-27 08:26:13] 2026-01-27 13:25:23,423 | INFO     | **************************************
[2026-01-27 08:26:13] 2026-01-27 13:25:23,925 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-27 08:26:13] 2026-01-27 13:25:24,013 | INFO     | sufficient remaining disk space (62129176576 B)
[2026-01-27 08:26:13] 2026-01-27 13:25:24,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:26:13] 2026-01-27 13:25:24,013 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:26:13] 2026-01-27 13:25:24,014 | INFO     | update_server=False
[2026-01-27 08:26:13] 2026-01-27 13:25:24,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:26:13] 2026-01-27 13:25:24,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:26:13] 2026-01-27 13:25:24,014 | INFO     | aborting loop
[2026-01-27 08:26:13] 2026-01-27 13:25:24,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:26:13] 2026-01-27 13:25:24,253 | INFO     | all data control threads have been joined
[2026-01-27 08:26:13] 2026-01-27 13:25:24,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:26:13] 2026-01-27 13:25:24,933 | INFO     | all job control threads have been joined
[2026-01-27 08:26:13] 2026-01-27 13:25:24,986 | INFO     | all payload control threads have been joined
[2026-01-27 08:26:13] 2026-01-27 13:25:25,020 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,020 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,041 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,259 | INFO     | [data] control thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,269 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,378 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,939 | INFO     | [job] control thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,992 | INFO     | [payload] control thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,995 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:25,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:26,049 | INFO     | [job] validate thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:26,127 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:26,151 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:26,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:26:13] 2026-01-27 13:25:27,627 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:28,761 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:26:13] 2026-01-27 13:25:55,183 | INFO     | PID=1014440 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 08:26:13] 2026-01-27 13:25:55,183 | INFO     | .. there are 9 such processes running
[2026-01-27 08:26:13] 2026-01-27 13:25:55,184 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:26:13] 2026-01-27 13:25:55,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:26:13] 2026-01-27 13:25:55,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:26:13] 2026-01-27 13:26:05,702 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:26:13] 2026-01-27 13:26:07,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015396169536)>', '<ExcThread(monitor, started 140015036253952)>']
[2026-01-27 08:26:13] 2026-01-27 13:26:08,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:26:13] 2026-01-27 13:26:08,265 | INFO     | [monitor] control thread has ended
[2026-01-27 08:26:13] 2026-01-27 13:26:12,839 | INFO     | all workflow threads have been joined
[2026-01-27 08:26:13] 2026-01-27 13:26:12,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:26:13] 2026-01-27 13:26:12,840 | INFO     | traces error code: 0
[2026-01-27 08:26:13] 2026-01-27 13:26:12,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:26:13] 2026-01-27 13:26:13,107 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:26:13] 2026-01-27 13:26:13,110 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:26:13] 2026-01-27 13:26:13,113 [wrapper] pilotpid: 1014440
[2026-01-27 08:26:13] 2026-01-27 13:26:13,116 [wrapper] Pilot exit status: 0
[2026-01-27 08:26:13] 2026-01-27 13:26:13,134 [wrapper] pandaids: 6983466822 6983466822
[2026-01-27 08:26:13] 2026-01-27 13:26:13,186 [wrapper] cleanup supervisor_pilot 1921650 1014441
[2026-01-27 08:26:13] 2026-01-27 13:26:13,190 [wrapper] Test setup, not cleaning
[2026-01-27 08:26:13] 2026-01-27 13:26:13,193 [wrapper] apfmon messages muted
[2026-01-27 08:26:13] 2026-01-27 13:26:13,196 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:26:13] 2026-01-27 13:26:13,199 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:26:13]  *** Error codes and diagnostics ***
[2026-01-27 08:26:13]     "exeErrorCode": 0,
[2026-01-27 08:26:13]     "exeErrorDiag": "",
[2026-01-27 08:26:13]     "pilotErrorCode": 0,
[2026-01-27 08:26:13]     "pilotErrorDiag": "",
[2026-01-27 08:26:13]  *** Listing of results directory ***
[2026-01-27 08:26:13] total 1166232
[2026-01-27 08:26:13] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 17:54 pilot3.tar.gz
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 17:54 queuedata.json
[2026-01-27 08:26:13] -rwx------. 1 boincer umatlas     36322 Jan 25 17:54 runpilot2-wrapper.sh
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas       100 Jan 26 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:26:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 15:21 run_atlas
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas       105 Jan 26 15:21 job.xml
[2026-01-27 08:26:13] -rw-r--r--. 3 boincer umatlas 498967428 Jan 26 15:21 EVNT.48318032._000031.pool.root.1
[2026-01-27 08:26:13] -rw-r--r--. 3 boincer umatlas 498967428 Jan 26 15:21 ATLAS.root_0
[2026-01-27 08:26:13] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 15:21 start_atlas.sh
[2026-01-27 08:26:13] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 15:21 shared
[2026-01-27 08:26:13] -rw-r--r--. 2 boincer umatlas    597756 Jan 26 15:21 input.tar.gz
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas         0 Jan 26 15:21 boinc_lockfile
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 22:47 pandaJob.out
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas        57 Jan 26 22:47 setup.sh.local
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas   1006433 Jan 26 22:47 agis_schedconf.cvmfs.json
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas       442 Jan 26 22:48 workernode_map.json
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas      6616 Jan 27 08:20 init_data.xml
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas 182236496 Jan 27 08:24 HITS.48318034._001548.pool.root.1
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas       533 Jan 27 08:24 boinc_task_state.xml
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas      1049 Jan 27 08:25 memory_monitor_summary.json
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas   1516246 Jan 27 08:25 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas    750896 Jan 27 08:25 log.48318034._001548.job.log.tgz.1
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas      6407 Jan 27 08:25 heartbeat.json
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas        96 Jan 27 08:25 pilot_heartbeat.json
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 08:26 boinc_mmap_file
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas        29 Jan 27 08:26 wrapper_checkpoint.txt
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas      4819 Jan 27 08:26 pilotlog.txt
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas   4298980 Jan 27 08:26 log.48318034._001548.job.log.1
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas       357 Jan 27 08:26 output.list
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas       620 Jan 27 08:26 runtime_log
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas   5068800 Jan 27 08:26 result.tar.gz
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas      9427 Jan 27 08:26 runtime_log.err
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas       787 Jan 27 08:26 otyLDm3AO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjv1KDmprZdOm.diag
[2026-01-27 08:26:13] -rw-r--r--. 1 boincer umatlas     23294 Jan 27 08:26 stderr.txt
[2026-01-27 08:26:13] HITS file was successfully produced:
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas 182236496 Jan 27 08:24 shared/HITS.pool.root.1
[2026-01-27 08:26:13]  *** Contents of shared directory: ***
[2026-01-27 08:26:13] total 670800
[2026-01-27 08:26:13] -rw-r--r--. 3 boincer umatlas 498967428 Jan 26 15:21 ATLAS.root_0
[2026-01-27 08:26:13] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 15:21 start_atlas.sh
[2026-01-27 08:26:13] -rw-r--r--. 2 boincer umatlas    597756 Jan 26 15:21 input.tar.gz
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas 182236496 Jan 27 08:24 HITS.pool.root.1
[2026-01-27 08:26:13] -rw-------. 1 boincer umatlas   5068800 Jan 27 08:26 result.tar.gz
08:26:15 (1007153): run_atlas exited; CPU time 57854.408923
08:26:15 (1007153): called boinc_finish(0)

</stderr_txt>
]]>

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