Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:22 (10184): wrapper (7.7.26015): starting
12:27:22 (10184): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 12:27:22] Arguments: --nthreads 12
[2026-01-26 12:27:22] Threads: 12
[2026-01-26 12:27:22] Checking for CVMFS
[2026-01-26 12:27:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:27:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:27:23] 2.11.2.0 2981 375775 97560 155555 2 50 11391536 20275201 1 130560 1 161172324 99.951 22821789 16791 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 12:27:23] CVMFS is ok
[2026-01-26 12:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 12:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 12:27:23] Further information can be found at the LHC@home message board.
[2026-01-26 12:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:27:23] Checking for apptainer binary...
[2026-01-26 12:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:27:23] Running /usr/bin/apptainer --version
[2026-01-26 12:27:23] apptainer version 1.3.2-1.el7
[2026-01-26 12:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:27:24] c-205-30.aglt2.org
[2026-01-26 12:27:24] apptainer works
[2026-01-26 12:27:24] Set ATHENA_PROC_NUMBER=12
[2026-01-26 12:27:24] Set ATHENA_CORE_NUMBER=12
[2026-01-26 12:27:24] Starting ATLAS job with PandaID=6983466722
[2026-01-26 12:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:44:16]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:44:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 13:44:16]  is_altstaged=None
[2026-01-26 13:44:16]  is_tar=False
[2026-01-26 13:44:16]  lfn=log.48318034._001448.job.log.tgz.1
[2026-01-26 13:44:16]  mtime=0
[2026-01-26 13:44:16]  protocol_id=None
[2026-01-26 13:44:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 13:44:16]  replicas=None
[2026-01-26 13:44:16]  scope=mc23_13p6TeV
[2026-01-26 13:44:16]  status=None
[2026-01-26 13:44:16]  status_code=0
[2026-01-26 13:44:16]  storage_token=
[2026-01-26 13:44:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983466722/log.48318034._001448.job.log.tgz.1
[2026-01-26 13:44:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/5b/log.48318034._001448.job.log.tgz.1
[2026-01-26 13:44:16]  workdir=None
[2026-01-26 13:44:16] ]
[2026-01-26 13:44:16] 2026-01-26 18:43:38,224 | INFO     | transferring file log.48318034._001448.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983466722/log.48318034._001448.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 13:44:16] 2026-01-26 18:43:38,224 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983466722/log.48318034._001448.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._001448.job
[2026-01-26 13:44:16] 2026-01-26 18:43:38,245 | INFO     | adding to output.list: log.48318034._001448.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/5b/log.48318034._001448.job.log.tg
[2026-01-26 13:44:16] 2026-01-26 18:43:38,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 13:44:16] 2026-01-26 18:43:38,246 | INFO     | summary of transferred files:
[2026-01-26 13:44:16] 2026-01-26 18:43:38,247 | INFO     |  -- lfn=log.48318034._001448.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 13:44:16] 2026-01-26 18:43:38,247 | INFO     | stage-out finished correctly
[2026-01-26 13:44:16] 2026-01-26 18:43:38,858 | INFO     | time since job start (4554s) is within the limit (349056.0s)
[2026-01-26 13:44:16] 2026-01-26 18:43:39,980 | INFO     | monitor loop #347: job 0:6983466722 is in state 'finished'
[2026-01-26 13:44:16] 2026-01-26 18:43:39,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:44:16] 2026-01-26 18:43:40,876 | INFO     | time since job start (4556s) is within the limit (349056.0s)
[2026-01-26 13:44:16] 2026-01-26 18:43:41,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 13:44:16] 2026-01-26 18:43:42,484 | INFO     | monitor loop #348: job 0:6983466722 is in state 'finished'
[2026-01-26 13:44:16] 2026-01-26 18:43:42,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,879 | INFO     | time since job start (4558s) is within the limit (349056.0s)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,930 | INFO     | job 6983466722 has state=finished
[2026-01-26 13:44:16] 2026-01-26 18:43:42,930 | INFO     | preparing for final server update for job 6983466722 in state='finished'
[2026-01-26 13:44:16] 2026-01-26 18:43:42,991 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,991 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983466722/jobReport.json
[2026-01-26 13:44:16] 2026-01-26 18:43:42,993 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 13:44:16] 2026-01-26 18:43:42,994 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,994 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,994 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:44:16] 2026-01-26 18:43:42,994 | INFO     | job 6983466722 has finished - writing final server update
[2026-01-26 13:44:16] 2026-01-26 18:43:42,994 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983466722/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:44:16] 2026-01-26 18:43:42,996 | INFO     | extracted standard info from prmon json
[2026-01-26 13:44:16] 2026-01-26 18:43:42,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:44:16] 2026-01-26 18:43:42,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:44:16] 2026-01-26 18:43:42,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:44:16] 2026-01-26 18:43:42,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:44:16] 2026-01-26 18:43:42,998 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:44:16] 2026-01-26 18:43:42,999 | INFO     | sum of square deviations: 97479037.0
[2026-01-26 13:44:16] 2026-01-26 18:43:42,999 | INFO     | sum of deviations: -7760392672.000001
[2026-01-26 13:44:16] 2026-01-26 18:43:42,999 | INFO     | mean x: 1769450836.5
[2026-01-26 13:44:16] 2026-01-26 18:43:42,999 | INFO     | mean y: 2862741.9411764704
[2026-01-26 13:44:16] 2026-01-26 18:43:42,999 | INFO     | intersect: 140870414655.06552
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | chi2: 0.07575845921151608
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | current memory leak: -79.61 B/s (using 68 data points, chi2=0.08)
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | could have reported an average CPU frequency of 1762 MHz (6 samples)
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | ..............................
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | . Timing measurements:
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | . get job = 0 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,000 | INFO     | . initial setup = 7 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | . payload setup = 7 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | . stage-in = 0 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | . payload execution = 4531 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | . stage-out = 0 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | . log creation = 0 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,001 | INFO     | ..............................
[2026-01-26 13:44:16] 2026-01-26 18:43:43,497 | INFO     | 
[2026-01-26 13:44:16] 2026-01-26 18:43:43,497 | INFO     | job summary report
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | --------------------------------------------------
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | PanDA job id: 6983466722
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | task id: 48318034
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | errors: (none)
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:44:16] 2026-01-26 18:43:43,498 | INFO     | pilot state: finished 
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | transexitcode: 0
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | exeerrorcode: 0
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | exeerrordiag: 
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | exitcode: 0
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | exitmsg: OK
[2026-01-26 13:44:16] 2026-01-26 18:43:43,499 | INFO     | cpuconsumptiontime: 48716 s
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | nevents: 400
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | neventsw: 0
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | pid: 18292
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | pgrp: 18292
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | corecount: 12
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | event service: False
[2026-01-26 13:44:16] 2026-01-26 18:43:43,500 | INFO     | sizes: {0: 2284201, 11: 2284201, 4541: 2310302, 4542: 2319300, 4546: 2319356, 4547: 2319550}
[2026-01-26 13:44:16] 2026-01-26 18:43:43,501 | INFO     | --------------------------------------------------
[2026-01-26 13:44:16] 2026-01-26 18:43:43,501 | INFO     | 
[2026-01-26 13:44:16] 2026-01-26 18:43:43,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 13:44:16] 2026-01-26 18:43:43,524 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:44:16] 2026-01-26 18:43:43,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,528 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:44:16] 2026-01-26 18:43:43,528 | INFO     | job 6983466722 has completed (purged errors)
[2026-01-26 13:44:16] 2026-01-26 18:43:43,528 | INFO     | overall cleanup function is called
[2026-01-26 13:44:16] 2026-01-26 18:43:44,532 | INFO     | --- collectZombieJob: --- 10, [18292]
[2026-01-26 13:44:16] 2026-01-26 18:43:44,532 | INFO     | zombie collector waiting for pid 18292
[2026-01-26 13:44:16] 2026-01-26 18:43:44,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:44:16] 2026-01-26 18:43:44,532 | INFO     | collected zombie processes
[2026-01-26 13:44:16] 2026-01-26 18:43:44,533 | INFO     | will attempt to kill all subprocesses of pid=18292
[2026-01-26 13:44:16] 2026-01-26 18:43:44,622 | INFO     | process IDs to be killed: [18292] (in reverse order)
[2026-01-26 13:44:16] 2026-01-26 18:43:44,671 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:44:16] 2026-01-26 18:43:44,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:44:16] 2026-01-26 18:43:44,675 | INFO     | did not find any defunct processes belonging to 18292
[2026-01-26 13:44:16] 2026-01-26 18:43:44,678 | INFO     | did not find any defunct processes belonging to 18292
[2026-01-26 13:44:16] 2026-01-26 18:43:44,679 | INFO     | ready for new job
[2026-01-26 13:44:16] 2026-01-26 18:43:44,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:44:16] 2026-01-26 18:43:44,680 | INFO     | **************************************
[2026-01-26 13:44:16] 2026-01-26 18:43:44,680 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:44:16] 2026-01-26 18:43:44,680 | INFO     | **************************************
[2026-01-26 13:44:16] 2026-01-26 18:43:44,680 | INFO     | 
[2026-01-26 13:44:16] 2026-01-26 18:43:44,681 | INFO     | architecture information:
[2026-01-26 13:44:16] 2026-01-26 18:43:44,681 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:44:16] 2026-01-26 18:43:44,696 | INFO     | cat /etc/os-release:
[2026-01-26 13:44:16] NAME="CentOS Linux"
[2026-01-26 13:44:16] VERSION="7 (Core)"
[2026-01-26 13:44:16] ID="centos"
[2026-01-26 13:44:16] ID_LIKE="rhel fedora"
[2026-01-26 13:44:16] VERSION_ID="7"
[2026-01-26 13:44:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:44:16] ANSI_COLOR="0;31"
[2026-01-26 13:44:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:44:16] HOME_URL="https://www.centos.org/"
[2026-01-26 13:44:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:44:16] 
[2026-01-26 13:44:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:44:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:44:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:44:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:44:16] 
[2026-01-26 13:44:16] 2026-01-26 18:43:44,696 | INFO     | **************************************
[2026-01-26 13:44:16] 2026-01-26 18:43:45,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 13:44:16] 2026-01-26 18:43:45,214 | INFO     | sufficient remaining disk space (28811722752 B)
[2026-01-26 13:44:16] 2026-01-26 18:43:45,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:44:16] 2026-01-26 18:43:45,214 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:44:16] 2026-01-26 18:43:45,214 | INFO     | update_server=False
[2026-01-26 13:44:16] 2026-01-26 18:43:45,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:44:16] 2026-01-26 18:43:45,398 | INFO     | all job control threads have been joined
[2026-01-26 13:44:16] 2026-01-26 18:43:45,661 | INFO     | all payload control threads have been joined
[2026-01-26 13:44:16] 2026-01-26 18:43:45,772 | INFO     | all data control threads have been joined
[2026-01-26 13:44:16] 2026-01-26 18:43:45,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:44:16] 2026-01-26 18:43:45,992 | INFO     | aborting loop
[2026-01-26 13:44:16] 2026-01-26 18:43:46,220 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:44:16] 2026-01-26 18:43:46,369 | INFO     | [job] validate thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,403 | INFO     | [job] control thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,422 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,550 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,568 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,666 | INFO     | [payload] control thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,777 | INFO     | [data] control thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,842 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:46,998 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:47,368 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:47,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:47,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:44:16] 2026-01-26 18:43:48,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:44:16] 2026-01-26 18:43:48,346 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:49,094 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:50,883 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:44:16] 2026-01-26 18:43:51,794 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:44:16] 2026-01-26 18:43:53,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140069598062400)>', '<ExcThread(monitor, started 140068949849856)>']
[2026-01-26 13:44:16] 2026-01-26 18:43:58,382 | INFO     | all workflow threads have been joined
[2026-01-26 13:44:16] 2026-01-26 18:43:58,382 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:44:16] 2026-01-26 18:43:58,382 | INFO     | traces error code: 0
[2026-01-26 13:44:16] 2026-01-26 18:43:58,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:44:16] 2026-01-26 18:44:16,073 | INFO     | PID=13865 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 13:44:16] 2026-01-26 18:44:16,073 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:44:16] 2026-01-26 18:44:16,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:44:16] 2026-01-26 18:44:16,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:44:16] 2026-01-26 18:44:16,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:44:16] 2026-01-26 18:44:16,074 | INFO     | [monitor] control thread has ended
[2026-01-26 13:44:16] 2026-01-26 18:44:16,151 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:44:16] 2026-01-26 18:44:16,155 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:44:16] 2026-01-26 18:44:16,159 [wrapper] pilotpid: 13865
[2026-01-26 13:44:16] 2026-01-26 18:44:16,163 [wrapper] Pilot exit status: 0
[2026-01-26 13:44:16] 2026-01-26 18:44:16,179 [wrapper] pandaids: 6983466722
[2026-01-26 13:44:16] 2026-01-26 18:44:16,217 [wrapper] cleanup supervisor_pilot  9863 13866
[2026-01-26 13:44:16] 2026-01-26 18:44:16,221 [wrapper] Test setup, not cleaning
[2026-01-26 13:44:16] 2026-01-26 18:44:16,224 [wrapper] apfmon messages muted
[2026-01-26 13:44:16] 2026-01-26 18:44:16,228 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:44:16] 2026-01-26 18:44:16,232 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:44:16]  *** Error codes and diagnostics ***
[2026-01-26 13:44:16]     "exeErrorCode": 0,
[2026-01-26 13:44:16]     "exeErrorDiag": "",
[2026-01-26 13:44:16]     "pilotErrorCode": 0,
[2026-01-26 13:44:16]     "pilotErrorDiag": "",
[2026-01-26 13:44:16]  *** Listing of results directory ***
[2026-01-26 13:44:16] total 665984
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 17:54 pilot3.tar.gz
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 17:54 queuedata.json
[2026-01-26 13:44:16] -rwx------ 1 boincer umatlas     36322 Jan 25 17:54 runpilot2-wrapper.sh
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas       100 Jan 26 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:44:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 12:27 run_atlas
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas       105 Jan 26 12:27 job.xml
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas 491419831 Jan 26 12:27 EVNT.48318032._000029.pool.root.1
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 12:27 start_atlas.sh
[2026-01-26 13:44:16] drwxrwx--x 2 boincer umatlas      4096 Jan 26 12:27 shared
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas    597758 Jan 26 12:27 input.tar.gz
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas         0 Jan 26 12:27 boinc_lockfile
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas      2533 Jan 26 12:27 pandaJob.out
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas        57 Jan 26 12:27 setup.sh.local
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas   1006384 Jan 26 12:27 agis_schedconf.cvmfs.json
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas   1516246 Jan 26 12:27 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas       445 Jan 26 12:27 workernode_map.json
[2026-01-26 13:44:16] drwx------ 5 boincer umatlas      4096 Jan 26 12:27 pilot3
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas      5953 Jan 26 13:39 init_data.xml
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas 184440272 Jan 26 13:43 HITS.48318034._001448.pool.root.1
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas       531 Jan 26 13:43 boinc_task_state.xml
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas      1046 Jan 26 13:43 memory_monitor_summary.json
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas    421841 Jan 26 13:43 log.48318034._001448.job.log.tgz.1
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas        95 Jan 26 13:43 pilot_heartbeat.json
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas      6426 Jan 26 13:43 heartbeat.json
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas        27 Jan 26 13:43 wrapper_checkpoint.txt
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 13:43 boinc_mmap_file
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas       745 Jan 26 13:44 pilotlog.txt
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas    663300 Jan 26 13:44 log.48318034._001448.job.log.1
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas       357 Jan 26 13:44 output.list
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas       620 Jan 26 13:44 runtime_log
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas   1105920 Jan 26 13:44 result.tar.gz
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 13:44 runtime_log.err
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas       659 Jan 26 13:44 R58KDm2AO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSu1KDmtcpP1n.diag
[2026-01-26 13:44:16] -rw-r--r-- 1 boincer umatlas     21451 Jan 26 13:44 stderr.txt
[2026-01-26 13:44:16] HITS file was successfully produced:
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas 184440272 Jan 26 13:43 shared/HITS.pool.root.1
[2026-01-26 13:44:16]  *** Contents of shared directory: ***
[2026-01-26 13:44:16] total 661708
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas 491419831 Jan 26 12:27 ATLAS.root_0
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 12:27 start_atlas.sh
[2026-01-26 13:44:16] -rw-r--r-- 2 boincer umatlas    597758 Jan 26 12:27 input.tar.gz
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas 184440272 Jan 26 13:43 HITS.pool.root.1
[2026-01-26 13:44:16] -rw------- 1 boincer umatlas   1105920 Jan 26 13:44 result.tar.gz
13:44:18 (10184): run_atlas exited; CPU time 48701.411220
13:44:18 (10184): called boinc_finish(0)

</stderr_txt>
]]>

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