Name oXALDm96T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeW2KDmCQoOln_2
Workunit 238716260
Created 26 Jan 2026, 16:49:08 UTC
Sent 26 Jan 2026, 17:36:01 UTC
Report deadline 3 Feb 2026, 17:36:01 UTC
Received 28 Jan 2026, 10:54:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10854716
Run time 6 min 16 sec
CPU time 9 hours 26 min 18 sec
Priority 28
Validate state Valid
Credit 162.53
Device peak FLOPS 18.62 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.47 GB
Peak swap size 2.82 GB
Peak disk usage 972.13 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:28:20 (184588): wrapper (7.7.26015): starting
08:28:20 (184588): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 08:28:20] Arguments: --nthreads 4
[2026-01-28 08:28:20] Threads: 4
[2026-01-28 08:28:20] Checking for CVMFS
[2026-01-28 08:28:20] No cvmfs_config command found, will try listing directly
[2026-01-28 08:28:20] CVMFS is ok
[2026-01-28 08:28:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 08:28:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 08:28:20] Further information can be found at the LHC@home message board.
[2026-01-28 08:28:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 08:28:20] Checking for apptainer binary...
[2026-01-28 08:28:20] which: no apptainer in ((null))
[2026-01-28 08:28:20] apptainer is not installed, using version from CVMFS
[2026-01-28 08:28:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 08:28:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-28 08:28:20] apptainer works
[2026-01-28 08:28:20] Set ATHENA_PROC_NUMBER=4
[2026-01-28 08:28:20] Set ATHENA_CORE_NUMBER=4
[2026-01-28 08:28:20] Starting ATLAS job with PandaID=6984043546
[2026-01-28 08:28:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 10:53:08]  *** The last 200 lines of the pilot log: ***
[2026-01-28 10:53:08] 2026-01-28 09:51:41,322 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:53:08] 2026-01-28 09:51:41,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:53:08] 2026-01-28 09:51:41,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:53:08] 2026-01-28 09:51:41,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:53:08] 2026-01-28 09:51:41,326 | INFO     | fitting pss+swap vs Time
[2026-01-28 10:53:08] 2026-01-28 09:51:41,326 | INFO     | sum of square deviations: 869188390.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,327 | INFO     | sum of deviations: -5178825397.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,327 | INFO     | mean x: 1769589618.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,327 | INFO     | mean y: 2327513.8156028367
[2026-01-28 10:53:08] 2026-01-28 09:51:41,327 | INFO     | intersect: 10545951613.495453
[2026-01-28 10:53:08] 2026-01-28 09:51:41,328 | INFO     | chi2: 1.9752099955908509
[2026-01-28 10:53:08] 2026-01-28 09:51:41,328 | INFO     | sum of square deviations: 779958810.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | sum of deviations: 3071373027.5
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | mean x: 1769589465.5
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | mean y: 2341219.742647059
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | intersect: -6966064399.119254
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | chi2: 1.3175759836864933
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | current chi2=1.3175759836864933 (change=33.29438456530479 %)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,329 | INFO     | sum of square deviations: 697054930.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,330 | INFO     | sum of deviations: 3130271424.999999
[2026-01-28 10:53:08] 2026-01-28 09:51:41,330 | INFO     | mean x: 1769589313.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,330 | INFO     | mean y: 2341328.13740458
[2026-01-28 10:53:08] 2026-01-28 09:51:41,330 | INFO     | intersect: -7944370791.7657995
[2026-01-28 10:53:08] 2026-01-28 09:51:41,331 | INFO     | chi2: 1.3187833938263787
[2026-01-28 10:53:08] 2026-01-28 09:51:41,331 | INFO     | current chi2=1.3187833938263787 (change=-0.09163874834050094 %)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,331 | INFO     | right removable region: 130
[2026-01-28 10:53:08] 2026-01-28 09:51:41,331 | INFO     | sum of square deviations: 779958810.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | sum of deviations: -21066861728.999996
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | mean x: 1769589770.5
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | mean y: 2354083.6029411764
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | intersect: 47799369174.92083
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | chi2: 0.7132508782524681
[2026-01-28 10:53:08] 2026-01-28 09:51:41,332 | INFO     | current chi2=0.7132508782524681 (change=63.88987095829721 %)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,333 | INFO     | sum of square deviations: 697054930.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,333 | INFO     | sum of deviations: -19227391601.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,333 | INFO     | mean x: 1769589923.0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,333 | INFO     | mean y: 2350709.5190839693
[2026-01-28 10:53:08] 2026-01-28 09:51:41,334 | INFO     | intersect: 48814283540.55786
[2026-01-28 10:53:08] 2026-01-28 09:51:41,334 | INFO     | chi2: 0.713452473374032
[2026-01-28 10:53:08] 2026-01-28 09:51:41,334 | INFO     | current chi2=0.713452473374032 (change=-0.02826426545141318 %)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,334 | INFO     | left removable region: 20
[2026-01-28 10:53:08] 2026-01-28 09:51:41,334 | INFO     | sum of square deviations: 412686807.5
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | sum of deviations: -7432737973.499999
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | mean x: 1769589892.5
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | mean y: 2360347.0272727273
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | intersect: 31873740174.225967
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | chi2: 0.02812596025001328
[2026-01-28 10:53:08] 2026-01-28 09:51:41,335 | INFO     | current memory leak: -18.01 B/s (using 110 data points, chi2=0.03)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | could have reported an average CPU frequency of 2743 MHz (8 samples)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | ..............................
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . Timing measurements:
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . get job = 0 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . initial setup = 7 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . payload setup = 8 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . stage-in = 0 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,336 | INFO     | . payload execution = 8551 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,337 | INFO     | . stage-out = 0 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,337 | INFO     | . log creation = 0 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,337 | INFO     | ..............................
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | 
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | job summary report
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | --------------------------------------------------
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | PanDA job id: 6984043546
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | task id: 48310724
[2026-01-28 10:53:08] 2026-01-28 09:51:41,431 | INFO     | errors: (none)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | pilot state: finished 
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | transexitcode: 0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | exeerrorcode: 0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | exeerrordiag: 
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | exitcode: 0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | exitmsg: OK
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | cpuconsumptiontime: 32707 s
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | nevents: 400
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | neventsw: 0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | pid: 194121
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | pgrp: 194121
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | corecount: 4
[2026-01-28 10:53:08] 2026-01-28 09:51:41,432 | INFO     | event service: False
[2026-01-28 10:53:08] 2026-01-28 09:51:41,433 | INFO     | sizes: {0: 2283778, 1: 2284239, 11: 2284239, 8564: 2312571, 8565: 2321593, 8568: 2321649, 8569: 2321971}
[2026-01-28 10:53:08] 2026-01-28 09:51:41,433 | INFO     | --------------------------------------------------
[2026-01-28 10:53:08] 2026-01-28 09:51:41,433 | INFO     | 
[2026-01-28 10:53:08] 2026-01-28 09:51:41,433 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2026-01-28 10:53:08] 2026-01-28 09:51:41,467 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | job 6984043546 has completed (purged errors)
[2026-01-28 10:53:08] 2026-01-28 09:51:41,469 | INFO     | overall cleanup function is called
[2026-01-28 10:53:08] 2026-01-28 09:51:42,478 | INFO     | --- collectZombieJob: --- 10, [194121]
[2026-01-28 10:53:08] 2026-01-28 09:51:42,478 | INFO     | zombie collector waiting for pid 194121
[2026-01-28 10:53:08] 2026-01-28 09:51:42,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 10:53:08] 2026-01-28 09:51:42,478 | INFO     | collected zombie processes
[2026-01-28 10:53:08] 2026-01-28 09:51:42,479 | INFO     | will attempt to kill all subprocesses of pid=194121
[2026-01-28 10:53:08] 2026-01-28 09:51:43,899 | INFO     | process IDs to be killed: [194121] (in reverse order)
[2026-01-28 10:53:08] 2026-01-28 09:51:44,162 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 10:53:08] 2026-01-28 09:51:44,163 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 10:53:08] 2026-01-28 09:51:44,222 | INFO     | did not find any defunct processes belonging to 194121
[2026-01-28 10:53:08] 2026-01-28 09:51:44,290 | INFO     | did not find any defunct processes belonging to 194121
[2026-01-28 10:53:08] 2026-01-28 09:51:44,291 | INFO     | ready for new job
[2026-01-28 10:53:08] 2026-01-28 09:51:44,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 10:53:08] 2026-01-28 09:51:44,293 | INFO     | **************************************
[2026-01-28 10:53:08] 2026-01-28 09:51:44,293 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 10:53:08] 2026-01-28 09:51:44,293 | INFO     | **************************************
[2026-01-28 10:53:08] 2026-01-28 09:51:44,294 | INFO     | 
[2026-01-28 10:53:08] 2026-01-28 09:51:44,303 | INFO     | architecture information:
[2026-01-28 10:53:08] 2026-01-28 09:51:44,304 | INFO     | executing command: cat /etc/os-release
[2026-01-28 10:53:08] 2026-01-28 09:51:44,328 | INFO     | cat /etc/os-release:
[2026-01-28 10:53:08] NAME="CentOS Linux"
[2026-01-28 10:53:08] VERSION="7 (Core)"
[2026-01-28 10:53:08] ID="centos"
[2026-01-28 10:53:08] ID_LIKE="rhel fedora"
[2026-01-28 10:53:08] VERSION_ID="7"
[2026-01-28 10:53:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 10:53:08] ANSI_COLOR="0;31"
[2026-01-28 10:53:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 10:53:08] HOME_URL="https://www.centos.org/"
[2026-01-28 10:53:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 10:53:08] 
[2026-01-28 10:53:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 10:53:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 10:53:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 10:53:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 10:53:08] 
[2026-01-28 10:53:08] 2026-01-28 09:51:44,329 | INFO     | **************************************
[2026-01-28 10:53:08] 2026-01-28 09:51:44,421 | WARNING  | process 194121 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 10:53:08] 2026-01-28 09:51:44,832 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-28 10:53:08] 2026-01-28 09:51:44,858 | INFO     | sufficient remaining disk space (3319352262656 B)
[2026-01-28 10:53:08] 2026-01-28 09:51:44,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 10:53:08] 2026-01-28 09:51:44,858 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 10:53:08] 2026-01-28 09:51:44,858 | INFO     | update_server=False
[2026-01-28 10:53:08] 2026-01-28 09:51:44,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 10:53:08] 2026-01-28 09:51:44,913 | INFO     | all payload control threads have been joined
[2026-01-28 10:53:08] 2026-01-28 09:51:45,096 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:53:08] 2026-01-28 09:51:45,619 | INFO     | all data control threads have been joined
[2026-01-28 10:53:08] 2026-01-28 09:51:45,864 | INFO     | [job] retrieve thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:45,886 | INFO     | number of running child processes to parent process 194121: 1
[2026-01-28 10:53:08] 2026-01-28 09:51:45,886 | INFO     | maximum number of monitored processes: 6
[2026-01-28 10:53:08] 2026-01-28 09:51:45,887 | INFO     | aborting job monitoring since job object (job id=6984043546) has expired
[2026-01-28 10:53:08] 2026-01-28 09:51:45,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:53:08] 2026-01-28 09:51:45,887 | INFO     | will abort loop
[2026-01-28 10:53:08] 2026-01-28 09:51:45,918 | INFO     | [payload] control thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 10:53:08] 2026-01-28 09:51:46,308 | INFO     | all job control threads have been joined
[2026-01-28 10:53:08] 2026-01-28 09:51:46,375 | INFO     | [job] validate thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,395 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:53:08] 2026-01-28 09:51:46,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 10:53:08] 2026-01-28 09:51:46,563 | INFO     | [payload] failed_post thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,625 | INFO     | [data] control thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,647 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,820 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:46,892 | INFO     | [job] job monitor thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:47,076 | INFO     | [payload] validate_post thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:47,262 | INFO     | [data] copytool_in thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:47,313 | INFO     | [job] control thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:47,447 | INFO     | [job] queue monitor thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:48,021 | INFO     | [data] copytool_out thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:50,461 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:54,938 | INFO     | [monitor] cgroup control has ended
[2026-01-28 10:53:08] 2026-01-28 09:51:55,226 | INFO     | job.realtimelogging is not enabled
[2026-01-28 10:53:08] 2026-01-28 09:51:56,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 10:53:08] 2026-01-28 09:51:57,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22641311307584)>', '<ExcThread(monitor, started 22641070319360)>']
[2026-01-28 10:53:08] 2026-01-28 09:52:02,456 | INFO     | all workflow threads have been joined
[2026-01-28 10:53:08] 2026-01-28 09:52:02,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 10:53:08] 2026-01-28 09:52:02,456 | INFO     | traces error code: 0
[2026-01-28 10:53:08] 2026-01-28 09:52:02,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 10:53:08] 2026-01-28 09:52:13,516 | INFO     | PID=188814 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 10:53:08] 2026-01-28 09:52:13,517 | INFO     | .. there are 7 such processes running
[2026-01-28 10:53:08] 2026-01-28 09:52:13,517 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 10:53:08] 2026-01-28 09:52:13,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 10:53:08] 2026-01-28 09:52:13,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 10:53:08] 2026-01-28 09:52:13,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 10:53:08] 2026-01-28 09:52:13,518 | INFO     | [monitor] control thread has ended
[2026-01-28 10:53:08] 2026-01-28 09:52:13,729 [wrapper] ==== pilot stdout END ====
[2026-01-28 10:53:08] 2026-01-28 09:52:13,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 10:53:08] 2026-01-28 09:52:13,734 [wrapper] pilotpid: 188814
[2026-01-28 10:53:08] 2026-01-28 09:52:13,737 [wrapper] Pilot exit status: 0
[2026-01-28 10:53:08] 2026-01-28 09:52:13,750 [wrapper] pandaids: 6984043546
[2026-01-28 10:53:08] 2026-01-28 09:52:13,917 [wrapper] cleanup supervisor_pilot  330554 188815
[2026-01-28 10:53:08] 2026-01-28 09:52:13,923 [wrapper] Test setup, not cleaning
[2026-01-28 10:53:08] 2026-01-28 09:52:13,926 [wrapper] apfmon messages muted
[2026-01-28 10:53:08] 2026-01-28 09:52:13,929 [wrapper] ==== wrapper stdout END ====
[2026-01-28 10:53:08] 2026-01-28 09:52:13,932 [wrapper] ==== wrapper stderr END ====
[2026-01-28 10:53:08]  *** Error codes and diagnostics ***
[2026-01-28 10:53:08]     "exeErrorCode": 0,
[2026-01-28 10:53:08]     "exeErrorDiag": "",
[2026-01-28 10:53:08]     "pilotErrorCode": 0,
[2026-01-28 10:53:08]     "pilotErrorDiag": "",
[2026-01-28 10:53:08]  *** Listing of results directory ***
[2026-01-28 10:53:08] total 669496
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:14 queuedata.json
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-28 10:53:08] -rwx------ 1 boinc boinc     36322 Jan 26 06:14 runpilot2-wrapper.sh
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc       100 Jan 28 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 10:53:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 08:28 run_atlas
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc       105 Jan 28 08:28 job.xml
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc      6692 Jan 28 08:28 init_data.xml
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc 497749763 Jan 28 08:28 EVNT.48310721._000047.pool.root.1
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc     15845 Jan 28 08:28 start_atlas.sh
[2026-01-28 10:53:08] drwxrwx--x 2 boinc boinc      4096 Jan 28 08:28 shared
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc    597765 Jan 28 08:28 input.tar.gz
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc         0 Jan 28 08:28 boinc_lockfile
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc      2532 Jan 28 08:28 pandaJob.out
[2026-01-28 10:53:08] -rw------- 1 boinc boinc   1004489 Jan 28 08:28 agis_schedconf.cvmfs.json
[2026-01-28 10:53:08] -rw------- 1 boinc boinc   1516246 Jan 28 08:28 agis_ddmendpoints.agis.ALL.json
[2026-01-28 10:53:08] -rw------- 1 boinc boinc       444 Jan 28 08:28 workernode_map.json
[2026-01-28 10:53:08] drwx------ 5 boinc boinc      4096 Jan 28 08:28 pilot3
[2026-01-28 10:53:08] -rw------- 1 boinc boinc 180822738 Jan 28 10:51 HITS.48310724._010443.pool.root.1
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc       529 Jan 28 10:51 boinc_task_state.xml
[2026-01-28 10:53:08] -rw------- 1 boinc boinc      1027 Jan 28 10:51 memory_monitor_summary.json
[2026-01-28 10:53:08] -rw------- 1 boinc boinc    319252 Jan 28 10:51 log.48310724._010443.job.log.tgz.1
[2026-01-28 10:53:08] -rw------- 1 boinc boinc      6351 Jan 28 10:51 heartbeat.json
[2026-01-28 10:53:08] -rw------- 1 boinc boinc        95 Jan 28 10:52 pilot_heartbeat.json
[2026-01-28 10:53:08] -rw------- 1 boinc boinc       822 Jan 28 10:52 pilotlog.txt
[2026-01-28 10:53:08] -rw------- 1 boinc boinc   1207907 Jan 28 10:52 log.48310724._010443.job.log.1
[2026-01-28 10:53:08] -rw------- 1 boinc boinc       357 Jan 28 10:52 output.list
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc       620 Jan 28 10:52 runtime_log
[2026-01-28 10:53:08] -rw------- 1 boinc boinc   1546240 Jan 28 10:52 result.tar.gz
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc      9221 Jan 28 10:52 runtime_log.err
[2026-01-28 10:53:08] -rw------- 1 boinc boinc       662 Jan 28 10:52 oXALDm96T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeW2KDmCQoOln.diag
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc        26 Jan 28 10:53 wrapper_checkpoint.txt
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc      8192 Jan 28 10:53 boinc_mmap_file
[2026-01-28 10:53:08] -rw-r--r-- 1 boinc boinc     20843 Jan 28 10:53 stderr.txt
[2026-01-28 10:53:08] HITS file was successfully produced:
[2026-01-28 10:53:08] -rw------- 1 boinc boinc 180822738 Jan 28 10:51 shared/HITS.pool.root.1
[2026-01-28 10:53:08]  *** Contents of shared directory: ***
[2026-01-28 10:53:08] total 664792
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc 497749763 Jan 28 08:28 ATLAS.root_0
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc     15845 Jan 28 08:28 start_atlas.sh
[2026-01-28 10:53:08] -rw-r--r-- 2 boinc boinc    597765 Jan 28 08:28 input.tar.gz
[2026-01-28 10:53:08] -rw------- 1 boinc boinc 180822738 Jan 28 10:51 HITS.pool.root.1
[2026-01-28 10:53:08] -rw------- 1 boinc boinc   1546240 Jan 28 10:52 result.tar.gz
10:53:09 (184588): run_atlas exited; CPU time 33288.212202
10:53:09 (184588): called boinc_finish(0)

</stderr_txt>
]]>


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