Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:28 (3053788): wrapper (7.7.26015): starting
11:38:28 (3053788): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 11:38:28] Arguments: --nthreads 8
[2026-01-26 11:38:28] Threads: 8
[2026-01-26 11:38:28] Checking for CVMFS
[2026-01-26 11:38:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:38:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:38:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:38:30] 2.13.3.0 12210 47008 182628 155553 1 894 22952477 40960000 46438 16776704 0 288968426 99.754 193558908 47380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:38:30] CVMFS is ok
[2026-01-26 11:38:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:38:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:38:30] Further information can be found at the LHC@home message board.
[2026-01-26 11:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:38:30] Checking for apptainer binary...
[2026-01-26 11:38:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:38:30] Running /usr/bin/apptainer --version
[2026-01-26 11:38:31] apptainer version 1.4.5-2.el9
[2026-01-26 11:38:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:38:31] c-208-37.aglt2.org
[2026-01-26 11:38:31] apptainer works
[2026-01-26 11:38:31] Set ATHENA_PROC_NUMBER=8
[2026-01-26 11:38:31] Set ATHENA_CORE_NUMBER=8
[2026-01-26 11:38:31] Starting ATLAS job with PandaID=6982676781
[2026-01-26 11:38:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:10:40]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:10:40]  is_altstaged=None
[2026-01-26 13:10:40]  is_tar=False
[2026-01-26 13:10:40]  lfn=log.48310826._009252.job.log.tgz.1
[2026-01-26 13:10:40]  mtime=0
[2026-01-26 13:10:40]  protocol_id=None
[2026-01-26 13:10:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 13:10:40]  replicas=None
[2026-01-26 13:10:40]  scope=mc23_13p6TeV
[2026-01-26 13:10:40]  status=None
[2026-01-26 13:10:40]  status_code=0
[2026-01-26 13:10:40]  storage_token=
[2026-01-26 13:10:40]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6982676781/log.48310826._009252.job.log.tgz.1
[2026-01-26 13:10:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/07/log.48310826._009252.job.log.tgz.1
[2026-01-26 13:10:40]  workdir=None
[2026-01-26 13:10:40] ]
[2026-01-26 13:10:40] 2026-01-26 18:09:39,024 | INFO     | time since job start (5356s) is within the limit (349056.0s)
[2026-01-26 13:10:40] 2026-01-26 18:09:39,088 | INFO     | transferring file log.48310826._009252.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6982676781/log.48310826._009252.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 13:10:40] 2026-01-26 18:09:39,088 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6982676781/log.48310826._009252.job.log.tgz.1 /tmp/boinchome/slots/3/log.48310826._009252.job
[2026-01-26 13:10:40] 2026-01-26 18:09:39,329 | INFO     | adding to output.list: log.48310826._009252.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/07/log.48310826._009252.job.log.tg
[2026-01-26 13:10:40] 2026-01-26 18:09:39,330 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 13:10:40] 2026-01-26 18:09:39,330 | INFO     | summary of transferred files:
[2026-01-26 13:10:40] 2026-01-26 18:09:39,330 | INFO     |  -- lfn=log.48310826._009252.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 13:10:40] 2026-01-26 18:09:39,330 | INFO     | stage-out finished correctly
[2026-01-26 13:10:40] 2026-01-26 18:09:40,612 | INFO     | monitor loop #331: job 0:6982676781 is in state 'finished'
[2026-01-26 13:10:40] 2026-01-26 18:09:40,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:10:40] 2026-01-26 18:09:41,039 | INFO     | time since job start (5358s) is within the limit (349056.0s)
[2026-01-26 13:10:40] 2026-01-26 18:09:42,735 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 13:10:40] 2026-01-26 18:09:43,121 | INFO     | monitor loop #332: job 0:6982676781 is in state 'finished'
[2026-01-26 13:10:40] 2026-01-26 18:09:43,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,168 | INFO     | job 6982676781 has state=finished
[2026-01-26 13:10:40] 2026-01-26 18:09:43,168 | INFO     | preparing for final server update for job 6982676781 in state='finished'
[2026-01-26 13:10:40] 2026-01-26 18:09:43,168 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6982676781/jobReport.json
[2026-01-26 13:10:40] 2026-01-26 18:09:43,170 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-01-26 13:10:40] 2026-01-26 18:09:43,170 | INFO     | this job has now completed (state=finished)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,171 | INFO     | log transfer has been attempted: DONE
[2026-01-26 13:10:40] 2026-01-26 18:09:43,171 | INFO     | job 6982676781 has finished - writing final server update
[2026-01-26 13:10:40] 2026-01-26 18:09:43,171 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6982676781/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | INFO     | extracted standard info from prmon json
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:10:40] 2026-01-26 18:09:43,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:10:40] 2026-01-26 18:09:43,216 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:10:40] 2026-01-26 18:09:43,216 | INFO     | sum of square deviations: 158726763.55000016
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | sum of deviations: 3729793042.0750012
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | mean x: 1769448418.575
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | mean y: 2473401.2375
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | intersect: -41576377274.64552
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | chi2: 0.06454803778783665
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | current memory leak: 23.50 B/s (using 80 data points, chi2=0.06)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | ..............................
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . Timing measurements:
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . get job = 0 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . initial setup = 41 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . payload setup = 42 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . stage-in = 0 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . payload execution = 5303 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . stage-out = 3 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,217 | INFO     | . log creation = 0 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,218 | INFO     | ..............................
[2026-01-26 13:10:40] 2026-01-26 18:09:43,373 | INFO     | 
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | job summary report
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | --------------------------------------------------
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | PanDA job id: 6982676781
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | task id: 48310826
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | errors: (none)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | pilot state: finished 
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | transexitcode: 0
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | exeerrorcode: 0
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | exeerrordiag: 
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | exitcode: 0
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | exitmsg: OK
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | cpuconsumptiontime: 20321 s
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | nevents: 400
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | neventsw: 0
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | pid: 3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | pgrp: 3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | corecount: 8
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | event service: False
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | sizes: {0: 2283810, 1: 2284271, 5351: 2310623, 5355: 2319621, 5359: 2319871}
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | --------------------------------------------------
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | 
[2026-01-26 13:10:40] 2026-01-26 18:09:43,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | job 6982676781 has completed (purged errors)
[2026-01-26 13:10:40] 2026-01-26 18:09:43,504 | INFO     | overall cleanup function is called
[2026-01-26 13:10:40] 2026-01-26 18:09:44,473 | INFO     | PID=3064968 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 13:10:40] 2026-01-26 18:09:44,473 | INFO     | .. there are 53 such processes running
[2026-01-26 13:10:40] 2026-01-26 18:09:44,511 | INFO     | --- collectZombieJob: --- 10, [3086765]
[2026-01-26 13:10:40] 2026-01-26 18:09:44,511 | INFO     | zombie collector waiting for pid 3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:44,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:10:40] 2026-01-26 18:09:44,511 | INFO     | collected zombie processes
[2026-01-26 13:10:40] 2026-01-26 18:09:44,511 | INFO     | will attempt to kill all subprocesses of pid=3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:46,702 | INFO     | process IDs to be killed: [3086765] (in reverse order)
[2026-01-26 13:10:40] 2026-01-26 18:09:47,208 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:10:40] 2026-01-26 18:09:47,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:10:40] 2026-01-26 18:09:47,312 | INFO     | did not find any defunct processes belonging to 3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:47,458 | INFO     | did not find any defunct processes belonging to 3086765
[2026-01-26 13:10:40] 2026-01-26 18:09:47,458 | INFO     | ready for new job
[2026-01-26 13:10:40] 2026-01-26 18:09:47,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:10:40] 2026-01-26 18:09:47,459 | INFO     | **************************************
[2026-01-26 13:10:40] 2026-01-26 18:09:47,459 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:10:40] 2026-01-26 18:09:47,459 | INFO     | **************************************
[2026-01-26 13:10:40] 2026-01-26 18:09:47,460 | INFO     | 
[2026-01-26 13:10:40] 2026-01-26 18:09:47,464 | INFO     | architecture information:
[2026-01-26 13:10:40] 2026-01-26 18:09:47,472 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:10:40] 2026-01-26 18:09:47,638 | INFO     | cat /etc/os-release:
[2026-01-26 13:10:40] NAME="CentOS Linux"
[2026-01-26 13:10:40] VERSION="7 (Core)"
[2026-01-26 13:10:40] ID="centos"
[2026-01-26 13:10:40] ID_LIKE="rhel fedora"
[2026-01-26 13:10:40] VERSION_ID="7"
[2026-01-26 13:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:10:40] ANSI_COLOR="0;31"
[2026-01-26 13:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:10:40] HOME_URL="https://www.centos.org/"
[2026-01-26 13:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:10:40] 
[2026-01-26 13:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:10:40] 
[2026-01-26 13:10:40] 2026-01-26 18:09:47,638 | INFO     | **************************************
[2026-01-26 13:10:40] 2026-01-26 18:09:48,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 13:10:40] 2026-01-26 18:09:48,172 | INFO     | sufficient remaining disk space (166417399808 B)
[2026-01-26 13:10:40] 2026-01-26 18:09:48,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:10:40] 2026-01-26 18:09:48,173 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:10:40] 2026-01-26 18:09:48,173 | INFO     | update_server=False
[2026-01-26 13:10:40] 2026-01-26 18:09:48,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:10:40] 2026-01-26 18:09:48,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:10:40] 2026-01-26 18:09:48,333 | INFO     | all job control threads have been joined
[2026-01-26 13:10:40] 2026-01-26 18:09:48,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:10:40] 2026-01-26 18:09:48,778 | INFO     | all data control threads have been joined
[2026-01-26 13:10:40] 2026-01-26 18:09:49,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:10:40] 2026-01-26 18:09:49,169 | INFO     | aborting loop
[2026-01-26 13:10:40] 2026-01-26 18:09:49,183 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:10:40] 2026-01-26 18:09:49,330 | INFO     | all payload control threads have been joined
[2026-01-26 13:10:40] 2026-01-26 18:09:49,354 | INFO     | [job] control thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,478 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,686 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,791 | INFO     | [data] control thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,965 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:49,969 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,175 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,185 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,185 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,255 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,336 | INFO     | [payload] control thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,630 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,677 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:50,692 | INFO     | [job] validate thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:09:53,217 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:10:40] 2026-01-26 18:10:19,003 | INFO     | PID=3064968 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 13:10:40] 2026-01-26 18:10:19,019 | INFO     | .. there are 53 such processes running
[2026-01-26 13:10:40] 2026-01-26 18:10:19,020 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:10:40] 2026-01-26 18:10:19,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:10:40] 2026-01-26 18:10:19,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:10:40] 2026-01-26 18:10:31,595 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:10:40] 2026-01-26 18:10:33,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992240461632)>', '<ExcThread(monitor, started 139991858517760)>']
[2026-01-26 13:10:40] 2026-01-26 18:10:34,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:10:40] 2026-01-26 18:10:34,108 | INFO     | [monitor] control thread has ended
[2026-01-26 13:10:40] 2026-01-26 18:10:38,445 | INFO     | all workflow threads have been joined
[2026-01-26 13:10:40] 2026-01-26 18:10:38,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:10:40] 2026-01-26 18:10:38,445 | INFO     | traces error code: 0
[2026-01-26 13:10:40] 2026-01-26 18:10:38,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:10:40] 2026-01-26 18:10:39,092 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:10:40] 2026-01-26 18:10:39,104 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:10:40] 2026-01-26 18:10:39,115 [wrapper] pilotpid: 3064968
[2026-01-26 13:10:40] 2026-01-26 18:10:39,141 [wrapper] Pilot exit status: 0
[2026-01-26 13:10:40] 2026-01-26 18:10:39,290 [wrapper] pandaids: 6982676781
[2026-01-26 13:10:40] 2026-01-26 18:10:39,911 [wrapper] cleanup supervisor_pilot 3860893 3064969
[2026-01-26 13:10:40] 2026-01-26 18:10:39,933 [wrapper] Test setup, not cleaning
[2026-01-26 13:10:40] 2026-01-26 18:10:39,953 [wrapper] apfmon messages muted
[2026-01-26 13:10:40] 2026-01-26 18:10:39,977 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:10:40] 2026-01-26 18:10:39,999 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:10:40]  *** Error codes and diagnostics ***
[2026-01-26 13:10:40]     "exeErrorCode": 0,
[2026-01-26 13:10:40]     "exeErrorDiag": "",
[2026-01-26 13:10:40]     "pilotErrorCode": 0,
[2026-01-26 13:10:40]     "pilotErrorDiag": "",
[2026-01-26 13:10:40]  *** Listing of results directory ***
[2026-01-26 13:10:40] total 656428
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas    621528 Jan 14 06:27 pilot3.tar.gz
[2026-01-26 13:10:40] -rwx------. 1 boincer umatlas     36322 Jan 25 00:14 runpilot2-wrapper.sh
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 00:15 queuedata.json
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas       100 Jan 26 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:10:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 11:38 run_atlas
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas       105 Jan 26 11:38 job.xml
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas 490445228 Jan 26 11:38 EVNT.48310824._000103.pool.root.1
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:38 start_atlas.sh
[2026-01-26 13:10:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 11:38 shared
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas    634120 Jan 26 11:38 input.tar.gz
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas         0 Jan 26 11:38 boinc_lockfile
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas      2524 Jan 26 11:38 pandaJob.out
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas        57 Jan 26 11:38 setup.sh.local
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas   1006276 Jan 26 11:39 agis_schedconf.cvmfs.json
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas   1516246 Jan 26 11:39 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas       432 Jan 26 11:40 workernode_map.json
[2026-01-26 13:10:40] drwx------. 5 boincer umatlas      4096 Jan 26 11:40 pilot3
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas 175546228 Jan 26 13:08 HITS.48310826._009252.pool.root.1
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas       530 Jan 26 13:08 boinc_task_state.xml
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas      7185 Jan 26 13:09 init_data.xml
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas      1050 Jan 26 13:09 memory_monitor_summary.json
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas    363097 Jan 26 13:09 log.48310826._009252.job.log.tgz.1
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas      6364 Jan 26 13:09 heartbeat.json
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas        95 Jan 26 13:10 pilot_heartbeat.json
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 13:10 boinc_mmap_file
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas        27 Jan 26 13:10 wrapper_checkpoint.txt
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas      4821 Jan 26 13:10 pilotlog.txt
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas    726411 Jan 26 13:10 log.48310826._009252.job.log.1
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas       357 Jan 26 13:10 output.list
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas       620 Jan 26 13:10 runtime_log
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas   1105920 Jan 26 13:10 result.tar.gz
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas      9341 Jan 26 13:10 runtime_log.err
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas       657 Jan 26 13:10 0PiNDmFd738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdm6KDm7cxbim.diag
[2026-01-26 13:10:40] -rw-r--r--. 1 boincer umatlas     21572 Jan 26 13:10 stderr.txt
[2026-01-26 13:10:40] HITS file was successfully produced:
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas 175546228 Jan 26 13:08 shared/HITS.pool.root.1
[2026-01-26 13:10:40]  *** Contents of shared directory: ***
[2026-01-26 13:10:40] total 652104
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas 490445228 Jan 26 11:38 ATLAS.root_0
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:38 start_atlas.sh
[2026-01-26 13:10:40] -rw-r--r--. 2 boincer umatlas    634120 Jan 26 11:38 input.tar.gz
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas 175546228 Jan 26 13:08 HITS.pool.root.1
[2026-01-26 13:10:40] -rw-------. 1 boincer umatlas   1105920 Jan 26 13:10 result.tar.gz
13:10:42 (3053788): run_atlas exited; CPU time 20524.460064
13:10:42 (3053788): called boinc_finish(0)

</stderr_txt>
]]>

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