Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:40:14 (3322): wrapper (7.7.26015): starting
11:40:14 (3322): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 11:40:14] Arguments: --nthreads 8
[2026-01-26 11:40:14] Threads: 8
[2026-01-26 11:40:14] Checking for CVMFS
[2026-01-26 11:40:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:40:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:40:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:40:14] 2.11.2.0 2830 161389 80200 155553 0 49 13234508 20275201 1 130560 0 45288393 99.883 9858028 30694 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:40:14] CVMFS is ok
[2026-01-26 11:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:40:14] Further information can be found at the LHC@home message board.
[2026-01-26 11:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:40:14] Checking for apptainer binary...
[2026-01-26 11:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:40:14] Running /usr/bin/apptainer --version
[2026-01-26 11:40:14] apptainer version 1.3.2-1.el7
[2026-01-26 11:40:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:40:16] c-204-20.aglt2.org
[2026-01-26 11:40:16] apptainer works
[2026-01-26 11:40:16] Set ATHENA_PROC_NUMBER=8
[2026-01-26 11:40:16] Set ATHENA_CORE_NUMBER=8
[2026-01-26 11:40:16] Starting ATLAS job with PandaID=6983305328
[2026-01-26 11:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:03:59]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:03:59] 2026-01-26 19:03:06,883 | INFO     | mean x: 1769449905.5
[2026-01-26 14:03:59] 2026-01-26 19:03:06,883 | INFO     | mean y: 2486349.785714286
[2026-01-26 14:03:59] 2026-01-26 19:03:06,883 | INFO     | intersect: -43381487158.87732
[2026-01-26 14:03:59] 2026-01-26 19:03:06,883 | INFO     | chi2: 1.430980051706627
[2026-01-26 14:03:59] 2026-01-26 19:03:06,883 | INFO     | sum of square deviations: 762879420.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,884 | INFO     | sum of deviations: 20051650807.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,884 | INFO     | mean x: 1769449753.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,884 | INFO     | mean y: 2484946.051851852
[2026-01-26 14:03:59] 2026-01-26 19:03:06,884 | INFO     | intersect: -46506029555.08439
[2026-01-26 14:03:59] 2026-01-26 19:03:06,885 | INFO     | chi2: 1.4323213380462114
[2026-01-26 14:03:59] 2026-01-26 19:03:06,885 | INFO     | current chi2=1.4323213380462114 (change=-0.09373200821247428 %)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,885 | INFO     | right removable region: 134
[2026-01-26 14:03:59] 2026-01-26 19:03:06,885 | INFO     | sum of square deviations: 762879420.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,886 | INFO     | sum of deviations: -94103419.00000046
[2026-01-26 14:03:59] 2026-01-26 19:03:06,886 | INFO     | mean x: 1769450058.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,886 | INFO     | mean y: 2522132.688888889
[2026-01-26 14:03:59] 2026-01-26 19:03:06,886 | INFO     | intersect: 220788998.77835438
[2026-01-26 14:03:59] 2026-01-26 19:03:06,887 | INFO     | chi2: 0.045682958776764655
[2026-01-26 14:03:59] 2026-01-26 19:03:06,887 | INFO     | current chi2=0.045682958776764655 (change=96.80757542900183 %)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,887 | INFO     | sum of square deviations: 681212772.5
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | sum of deviations: -2992482947.5000005
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | mean x: 1769450210.5
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | mean y: 2527434.7153846156
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | intersect: 7775502039.902395
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | chi2: 0.008883880700190671
[2026-01-26 14:03:59] 2026-01-26 19:03:06,888 | INFO     | current chi2=0.008883880700190671 (change=80.55318451766043 %)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,889 | INFO     | sum of square deviations: 605592750.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,889 | INFO     | sum of deviations: -2526475063.9999995
[2026-01-26 14:03:59] 2026-01-26 19:03:06,889 | INFO     | mean x: 1769450363.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,889 | INFO     | mean y: 2526490.28
[2026-01-26 14:03:59] 2026-01-26 19:03:06,890 | INFO     | intersect: 7384504261.819119
[2026-01-26 14:03:59] 2026-01-26 19:03:06,890 | INFO     | chi2: 0.008820496303900655
[2026-01-26 14:03:59] 2026-01-26 19:03:06,890 | INFO     | current chi2=0.008820496303900655 (change=0.7134764460384491 %)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,890 | INFO     | left removable region: 30
[2026-01-26 14:03:59] 2026-01-26 19:03:06,890 | INFO     | sum of square deviations: 348769330.0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,891 | INFO     | sum of deviations: 73275975.49999988
[2026-01-26 14:03:59] 2026-01-26 19:03:06,891 | INFO     | mean x: 1769450637.5
[2026-01-26 14:03:59] 2026-01-26 19:03:06,891 | INFO     | mean y: 2519795.028846154
[2026-01-26 14:03:59] 2026-01-26 19:03:06,891 | INFO     | intersect: -369239446.42139596
[2026-01-26 14:03:59] 2026-01-26 19:03:06,891 | INFO     | chi2: 0.004472201498197453
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | current memory leak: 0.21 B/s (using 104 data points, chi2=0.00)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | could have reported an average CPU frequency of 1695 MHz (8 samples)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | ..............................
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | . Timing measurements:
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | . get job = 0 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,892 | INFO     | . initial setup = 8 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | . payload setup = 8 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | . stage-in = 0 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | . payload execution = 8524 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | . stage-out = 0 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | . log creation = 0 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,893 | INFO     | ..............................
[2026-01-26 14:03:59] 2026-01-26 19:03:06,979 | INFO     | 
[2026-01-26 14:03:59] 2026-01-26 19:03:06,980 | INFO     | job summary report
[2026-01-26 14:03:59] 2026-01-26 19:03:06,980 | INFO     | --------------------------------------------------
[2026-01-26 14:03:59] 2026-01-26 19:03:06,980 | INFO     | PanDA job id: 6983305328
[2026-01-26 14:03:59] 2026-01-26 19:03:06,980 | INFO     | task id: 48318042
[2026-01-26 14:03:59] 2026-01-26 19:03:06,980 | INFO     | errors: (none)
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | pilot state: finished 
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | transexitcode: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | exeerrorcode: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | exeerrordiag: 
[2026-01-26 14:03:59] 2026-01-26 19:03:06,981 | INFO     | exitcode: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,982 | INFO     | exitmsg: OK
[2026-01-26 14:03:59] 2026-01-26 19:03:06,982 | INFO     | cpuconsumptiontime: 63996 s
[2026-01-26 14:03:59] 2026-01-26 19:03:06,982 | INFO     | nevents: 400
[2026-01-26 14:03:59] 2026-01-26 19:03:06,982 | INFO     | neventsw: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:06,982 | INFO     | pid: 11585
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | pgrp: 11585
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | corecount: 8
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | event service: False
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | sizes: {0: 2284045, 1: 2284251, 11: 2284279, 8533: 2312104, 8534: 2312103, 8535: 2321479}
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | --------------------------------------------------
[2026-01-26 14:03:59] 2026-01-26 19:03:06,983 | INFO     | 
[2026-01-26 14:03:59] 2026-01-26 19:03:06,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 14:03:59] 2026-01-26 19:03:07,012 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,013 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,013 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,014 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:03:59] 2026-01-26 19:03:07,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:03:59] 2026-01-26 19:03:07,018 | INFO     | job 6983305328 has completed (purged errors)
[2026-01-26 14:03:59] 2026-01-26 19:03:07,018 | INFO     | overall cleanup function is called
[2026-01-26 14:03:59] 2026-01-26 19:03:08,028 | INFO     | --- collectZombieJob: --- 10, [11585]
[2026-01-26 14:03:59] 2026-01-26 19:03:08,029 | INFO     | zombie collector waiting for pid 11585
[2026-01-26 14:03:59] 2026-01-26 19:03:08,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:03:59] 2026-01-26 19:03:08,030 | INFO     | collected zombie processes
[2026-01-26 14:03:59] 2026-01-26 19:03:08,030 | INFO     | will attempt to kill all subprocesses of pid=11585
[2026-01-26 14:03:59] 2026-01-26 19:03:08,124 | INFO     | process IDs to be killed: [11585] (in reverse order)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,187 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:03:59] 2026-01-26 19:03:08,194 | INFO     | did not find any defunct processes belonging to 11585
[2026-01-26 14:03:59] 2026-01-26 19:03:08,198 | INFO     | did not find any defunct processes belonging to 11585
[2026-01-26 14:03:59] 2026-01-26 19:03:08,198 | INFO     | ready for new job
[2026-01-26 14:03:59] 2026-01-26 19:03:08,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:03:59] 2026-01-26 19:03:08,202 | INFO     | **************************************
[2026-01-26 14:03:59] 2026-01-26 19:03:08,202 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:03:59] 2026-01-26 19:03:08,202 | INFO     | **************************************
[2026-01-26 14:03:59] 2026-01-26 19:03:08,202 | INFO     | 
[2026-01-26 14:03:59] 2026-01-26 19:03:08,203 | INFO     | architecture information:
[2026-01-26 14:03:59] 2026-01-26 19:03:08,204 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:03:59] 2026-01-26 19:03:08,223 | INFO     | cat /etc/os-release:
[2026-01-26 14:03:59] NAME="CentOS Linux"
[2026-01-26 14:03:59] VERSION="7 (Core)"
[2026-01-26 14:03:59] ID="centos"
[2026-01-26 14:03:59] ID_LIKE="rhel fedora"
[2026-01-26 14:03:59] VERSION_ID="7"
[2026-01-26 14:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:03:59] ANSI_COLOR="0;31"
[2026-01-26 14:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:03:59] HOME_URL="https://www.centos.org/"
[2026-01-26 14:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:03:59] 
[2026-01-26 14:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:03:59] 
[2026-01-26 14:03:59] 2026-01-26 19:03:08,223 | INFO     | **************************************
[2026-01-26 14:03:59] 2026-01-26 19:03:08,495 | WARNING  | process 11585 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:03:59] 2026-01-26 19:03:08,565 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,572 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,572 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 14:03:59] 2026-01-26 19:03:08,573 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 14:03:59] 2026-01-26 19:03:08,573 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6983305328/payload.stdout) since it has not been created yet
[2026-01-26 14:03:59] 2026-01-26 19:03:08,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:03:59] 2026-01-26 19:03:08,593 | INFO     | sufficient remaining disk space (18141413376 B)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,593 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 14:03:59] 2026-01-26 19:03:08,594 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6983305328/HITS.48318042._001241.pool.root.1 since it does not exist
[2026-01-26 14:03:59] 2026-01-26 19:03:08,680 | INFO     | number of running child processes to parent process 11585: 1
[2026-01-26 14:03:59] 2026-01-26 19:03:08,681 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:03:59] 2026-01-26 19:03:08,681 | INFO     | aborting job monitoring since job object (job id=6983305328) has expired
[2026-01-26 14:03:59] 2026-01-26 19:03:08,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:03:59] 2026-01-26 19:03:08,746 | INFO     | sufficient remaining disk space (18141413376 B)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:03:59] 2026-01-26 19:03:08,747 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:03:59] 2026-01-26 19:03:08,747 | INFO     | update_server=False
[2026-01-26 14:03:59] 2026-01-26 19:03:08,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:03:59] 2026-01-26 19:03:08,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:03:59] 2026-01-26 19:03:08,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:03:59] 2026-01-26 19:03:08,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:03:59] 2026-01-26 19:03:08,749 | INFO     | will abort loop
[2026-01-26 14:03:59] 2026-01-26 19:03:08,843 | INFO     | all data control threads have been joined
[2026-01-26 14:03:59] 2026-01-26 19:03:09,353 | INFO     | all payload control threads have been joined
[2026-01-26 14:03:59] 2026-01-26 19:03:09,752 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:03:59] 2026-01-26 19:03:09,753 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,754 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,764 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,767 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,848 | INFO     | [data] control thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:09,866 | INFO     | all job control threads have been joined
[2026-01-26 14:03:59] 2026-01-26 19:03:10,237 | INFO     | [job] validate thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:10,337 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:10,358 | INFO     | [payload] control thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:10,478 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:10,872 | INFO     | [job] control thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:10,961 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:11,019 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:11,759 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:12,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:12,909 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:03:59] 2026-01-26 19:03:13,914 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:03:59] 2026-01-26 19:03:39,648 | INFO     | PID=7013 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 14:03:59] 2026-01-26 19:03:39,649 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:03:59] 2026-01-26 19:03:39,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:03:59] 2026-01-26 19:03:39,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:03:59] 2026-01-26 19:03:53,959 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:03:59] 2026-01-26 19:03:54,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098226796352)>', '<ExcThread(monitor, started 140097630480128)>']
[2026-01-26 14:03:59] 2026-01-26 19:03:54,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:03:59] 2026-01-26 19:03:54,694 | INFO     | [monitor] control thread has ended
[2026-01-26 14:03:59] 2026-01-26 19:03:59,353 | INFO     | all workflow threads have been joined
[2026-01-26 14:03:59] 2026-01-26 19:03:59,353 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:03:59] 2026-01-26 19:03:59,358 | INFO     | traces error code: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:59,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:03:59] 2026-01-26 19:03:59,482 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:03:59] 2026-01-26 19:03:59,487 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:03:59] 2026-01-26 19:03:59,492 [wrapper] pilotpid: 7013
[2026-01-26 14:03:59] 2026-01-26 19:03:59,496 [wrapper] Pilot exit status: 0
[2026-01-26 14:03:59] 2026-01-26 19:03:59,514 [wrapper] pandaids: 6983305328
[2026-01-26 14:03:59] 2026-01-26 19:03:59,559 [wrapper] cleanup supervisor_pilot  1699 7014
[2026-01-26 14:03:59] 2026-01-26 19:03:59,563 [wrapper] Test setup, not cleaning
[2026-01-26 14:03:59] 2026-01-26 19:03:59,569 [wrapper] apfmon messages muted
[2026-01-26 14:03:59] 2026-01-26 19:03:59,573 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:03:59] 2026-01-26 19:03:59,577 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:03:59]  *** Error codes and diagnostics ***
[2026-01-26 14:03:59]     "exeErrorCode": 0,
[2026-01-26 14:03:59]     "exeErrorDiag": "",
[2026-01-26 14:03:59]     "pilotErrorCode": 0,
[2026-01-26 14:03:59]     "pilotErrorDiag": "",
[2026-01-26 14:03:59]  *** Listing of results directory ***
[2026-01-26 14:03:59] total 676256
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 13:47 pilot3.tar.gz
[2026-01-26 14:03:59] -rwx------ 1 boincer umatlas     36322 Jan 25 13:51 runpilot2-wrapper.sh
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 13:53 queuedata.json
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas       100 Jan 26 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:03:59] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 11:40 run_atlas
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas       105 Jan 26 11:40 job.xml
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas 494622039 Jan 26 11:40 EVNT.48318040._000025.pool.root.1
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:40 start_atlas.sh
[2026-01-26 14:03:59] drwxrwx--x 2 boincer umatlas      4096 Jan 26 11:40 shared
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas    597769 Jan 26 11:40 input.tar.gz
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas         0 Jan 26 11:40 boinc_lockfile
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas      2533 Jan 26 11:40 pandaJob.out
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas        57 Jan 26 11:40 setup.sh.local
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas   1006276 Jan 26 11:40 agis_schedconf.cvmfs.json
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas   1516246 Jan 26 11:40 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas       433 Jan 26 11:40 workernode_map.json
[2026-01-26 14:03:59] drwx------ 5 boincer umatlas      4096 Jan 26 11:40 pilot3
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas      5910 Jan 26 14:01 init_data.xml
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas 190698913 Jan 26 14:02 HITS.48318042._001241.pool.root.1
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas       530 Jan 26 14:02 boinc_task_state.xml
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas      1049 Jan 26 14:03 memory_monitor_summary.json
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas    405709 Jan 26 14:03 log.48318042._001241.job.log.tgz.1
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas      6400 Jan 26 14:03 heartbeat.json
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas        95 Jan 26 14:03 pilot_heartbeat.json
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 14:03 boinc_mmap_file
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas        27 Jan 26 14:03 wrapper_checkpoint.txt
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas      6294 Jan 26 14:03 pilotlog.txt
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas   1200861 Jan 26 14:03 log.48318042._001241.job.log.1
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas       357 Jan 26 14:03 output.list
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas       620 Jan 26 14:03 runtime_log
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas   1628160 Jan 26 14:03 result.tar.gz
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas       660 Jan 26 14:03 VYxNDmeNK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBc1KDmYXvLSn.diag
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas      9341 Jan 26 14:03 runtime_log.err
[2026-01-26 14:03:59] -rw-r--r-- 1 boincer umatlas     21378 Jan 26 14:03 stderr.txt
[2026-01-26 14:03:59] HITS file was successfully produced:
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas 190698913 Jan 26 14:02 shared/HITS.pool.root.1
[2026-01-26 14:03:59]  *** Contents of shared directory: ***
[2026-01-26 14:03:59] total 671460
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas 494622039 Jan 26 11:40 ATLAS.root_0
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 11:40 start_atlas.sh
[2026-01-26 14:03:59] -rw-r--r-- 2 boincer umatlas    597769 Jan 26 11:40 input.tar.gz
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas 190698913 Jan 26 14:02 HITS.pool.root.1
[2026-01-26 14:03:59] -rw------- 1 boincer umatlas   1628160 Jan 26 14:03 result.tar.gz
14:04:01 (3322): run_atlas exited; CPU time 63949.476521
14:04:01 (3322): called boinc_finish(0)

</stderr_txt>
]]>

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