Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:29:57 (172277): wrapper (7.7.26015): starting
11:29:57 (172277): wrapper: running run_atlas (--nthreads 10)
[2026-01-26 11:29:57] Arguments: --nthreads 10
[2026-01-26 11:29:57] Threads: 10
[2026-01-26 11:29:57] Checking for CVMFS
[2026-01-26 11:29:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:29:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:29:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:29:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:29:59] 2.13.3.0 10223 118109 254772 155553 1 804 25807763 40960000 49950 16776704 0 1284771526 99.705 1007775426 50763 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 11:29:59] CVMFS is ok
[2026-01-26 11:29:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:29:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:29:59] Further information can be found at the LHC@home message board.
[2026-01-26 11:29:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:29:59] Checking for apptainer binary...
[2026-01-26 11:29:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:29:59] Running /usr/bin/apptainer --version
[2026-01-26 11:29:59] apptainer version 1.4.5-2.el9
[2026-01-26 11:29:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:30:00] c8-7-6.aglt2.org
[2026-01-26 11:30:00] apptainer works
[2026-01-26 11:30:00] Set ATHENA_PROC_NUMBER=10
[2026-01-26 11:30:00] Set ATHENA_CORE_NUMBER=10
[2026-01-26 11:30:00] Starting ATLAS job with PandaID=6983231848
[2026-01-26 11:30:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:36:14]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983231848/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | INFO     | extracted standard info from prmon json
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 14:36:14] 2026-01-26 19:35:07,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 14:36:14] 2026-01-26 19:35:07,320 | INFO     | fitting pss+swap vs Time
[2026-01-26 14:36:14] 2026-01-26 19:35:07,320 | INFO     | sum of square deviations: 1778390590.7262597
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | sum of deviations: 46159030265.24579
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | mean x: 1769450632.0391061
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | mean y: 2529524.5363128493
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | intersect: -45924459576.20812
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | chi2: 3.8131399232611534
[2026-01-26 14:36:14] 2026-01-26 19:35:07,321 | INFO     | sum of square deviations: 1633487683.2183836
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | sum of deviations: 56620209603.28736
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | mean x: 1769450479.5402298
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | mean y: 2540245.3160919542
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | intersect: -61330433405.769
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | chi2: 3.0877967426601147
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | current chi2=3.0877967426601147 (change=19.022202048664806 %)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | right removable region: 173
[2026-01-26 14:36:14] 2026-01-26 19:35:07,322 | INFO     | sum of square deviations: 1633483413.2183836
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | sum of deviations: -2719056254.9195404
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | mean x: 1769450784.5402298
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | mean y: 2580689.488505747
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | intersect: 2947964881.665287
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | chi2: 0.8578520157867021
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | current chi2=0.8578520157867021 (change=77.50273965679624 %)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,323 | INFO     | sum of square deviations: 1496669410.710063
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | sum of deviations: -10730230482.52071
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | mean x: 1769450937.0414202
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | mean y: 2589591.50295858
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | intersect: 12688501554.492088
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | chi2: 0.7827230104758562
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | current chi2=0.7827230104758562 (change=8.757804834432665 %)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | left removable region: 20
[2026-01-26 14:36:14] 2026-01-26 19:35:07,324 | INFO     | sum of square deviations: 1110537579.764709
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | sum of deviations: 2877130560.431373
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | mean x: 1769451059.0392158
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | mean y: 2599983.2614379083
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | intersect: -4581613833.46326
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | chi2: 0.0003728064630755431
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | current memory leak: 2.59 B/s (using 153 data points, chi2=0.00)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,325 | INFO     | could have reported an average CPU frequency of 3799 MHz (10 samples)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | ..............................
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . Timing measurements:
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . get job = 0 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . initial setup = 38 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . payload setup = 44 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . stage-in = 0 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . payload execution = 10933 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . stage-out = 4 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | . log creation = 1 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,326 | INFO     | ..............................
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | 
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | job summary report
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | --------------------------------------------------
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | PanDA job id: 6983231848
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | task id: 48329117
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | errors: (none)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | pilot state: finished 
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | transexitcode: 0
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | exeerrorcode: 0
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | exeerrordiag: 
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | exitcode: 0
[2026-01-26 14:36:14] 2026-01-26 19:35:07,453 | INFO     | exitmsg: OK
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | cpuconsumptiontime: 44612 s
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | nevents: 400
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | neventsw: 0
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | pid: 207739
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | pgrp: 207739
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | corecount: 10
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | event service: False
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | sizes: {0: 2283874, 1: 2283958, 2: 2284419, 13: 2284419, 10978: 2313631, 10985: 2322813, 10986: 2322951}
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | --------------------------------------------------
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | 
[2026-01-26 14:36:14] 2026-01-26 19:35:07,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 14:36:14] 2026-01-26 19:35:07,629 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,629 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | job 6983231848 has completed (purged errors)
[2026-01-26 14:36:14] 2026-01-26 19:35:07,630 | INFO     | overall cleanup function is called
[2026-01-26 14:36:14] 2026-01-26 19:35:08,671 | INFO     | --- collectZombieJob: --- 10, [207739]
[2026-01-26 14:36:14] 2026-01-26 19:35:08,671 | INFO     | zombie collector waiting for pid 207739
[2026-01-26 14:36:14] 2026-01-26 19:35:08,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:36:14] 2026-01-26 19:35:08,671 | INFO     | collected zombie processes
[2026-01-26 14:36:14] 2026-01-26 19:35:08,671 | INFO     | will attempt to kill all subprocesses of pid=207739
[2026-01-26 14:36:14] 2026-01-26 19:35:09,055 | INFO     | PID=187994 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 14:36:14] 2026-01-26 19:35:09,055 | INFO     | .. there are 60 such processes running
[2026-01-26 14:36:14] 2026-01-26 19:35:12,325 | INFO     | process IDs to be killed: [207739] (in reverse order)
[2026-01-26 14:36:14] 2026-01-26 19:35:13,627 | WARNING  | process 207739 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:36:14] 2026-01-26 19:35:13,862 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:36:14] 2026-01-26 19:35:13,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:36:14] 2026-01-26 19:35:14,152 | INFO     | did not find any defunct processes belonging to 207739
[2026-01-26 14:36:14] 2026-01-26 19:35:14,294 | INFO     | did not find any defunct processes belonging to 207739
[2026-01-26 14:36:14] 2026-01-26 19:35:14,294 | INFO     | ready for new job
[2026-01-26 14:36:14] 2026-01-26 19:35:14,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:36:14] 2026-01-26 19:35:14,295 | INFO     | **************************************
[2026-01-26 14:36:14] 2026-01-26 19:35:14,295 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:36:14] 2026-01-26 19:35:14,296 | INFO     | **************************************
[2026-01-26 14:36:14] 2026-01-26 19:35:14,296 | INFO     | 
[2026-01-26 14:36:14] 2026-01-26 19:35:14,304 | INFO     | architecture information:
[2026-01-26 14:36:14] 2026-01-26 19:35:14,329 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:36:14] 2026-01-26 19:35:14,454 | INFO     | cat /etc/os-release:
[2026-01-26 14:36:14] NAME="CentOS Linux"
[2026-01-26 14:36:14] VERSION="7 (Core)"
[2026-01-26 14:36:14] ID="centos"
[2026-01-26 14:36:14] ID_LIKE="rhel fedora"
[2026-01-26 14:36:14] VERSION_ID="7"
[2026-01-26 14:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:36:14] ANSI_COLOR="0;31"
[2026-01-26 14:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:36:14] HOME_URL="https://www.centos.org/"
[2026-01-26 14:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:36:14] 
[2026-01-26 14:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:36:14] 
[2026-01-26 14:36:14] 2026-01-26 19:35:14,454 | INFO     | **************************************
[2026-01-26 14:36:14] 2026-01-26 19:35:14,995 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 14:36:14] 2026-01-26 19:35:15,178 | INFO     | sufficient remaining disk space (166868287488 B)
[2026-01-26 14:36:14] 2026-01-26 19:35:15,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:36:14] 2026-01-26 19:35:15,179 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:36:14] 2026-01-26 19:35:15,179 | INFO     | update_server=False
[2026-01-26 14:36:14] 2026-01-26 19:35:15,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:36:14] 2026-01-26 19:35:15,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:36:14] 2026-01-26 19:35:15,433 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:36:14] 2026-01-26 19:35:15,433 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:36:14] 2026-01-26 19:35:15,434 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 14:36:14] 2026-01-26 19:35:15,434 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 14:36:14] 2026-01-26 19:35:15,524 | INFO     | all payload control threads have been joined
[2026-01-26 14:36:14] 2026-01-26 19:35:16,185 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:16,248 | INFO     | all data control threads have been joined
[2026-01-26 14:36:14] 2026-01-26 19:35:16,311 | INFO     | all job control threads have been joined
[2026-01-26 14:36:14] 2026-01-26 19:35:16,536 | INFO     | [payload] control thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:16,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:36:14] 2026-01-26 19:35:16,686 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,077 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,190 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,222 | INFO     | number of running child processes to parent process 207739: 1
[2026-01-26 14:36:14] 2026-01-26 19:35:17,222 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:36:14] 2026-01-26 19:35:17,222 | INFO     | aborting job monitoring since job object (job id=6983231848) has expired
[2026-01-26 14:36:14] 2026-01-26 19:35:17,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:36:14] 2026-01-26 19:35:17,223 | INFO     | will abort loop
[2026-01-26 14:36:14] 2026-01-26 19:35:17,260 | INFO     | [data] control thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,316 | INFO     | [job] control thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,347 | INFO     | [job] validate thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,546 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,588 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,664 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,682 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:17,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:36:14] 2026-01-26 19:35:18,228 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:21,954 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:25,454 | INFO     | job.realtimelogging is not enabled
[2026-01-26 14:36:14] 2026-01-26 19:35:26,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:36:14] 2026-01-26 19:35:44,581 | INFO     | PID=187994 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 14:36:14] 2026-01-26 19:35:44,581 | INFO     | .. there are 60 such processes running
[2026-01-26 14:36:14] 2026-01-26 19:35:44,589 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:36:14] 2026-01-26 19:35:44,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:36:14] 2026-01-26 19:35:44,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:36:14] 2026-01-26 19:36:07,069 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:36:14] 2026-01-26 19:36:08,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356884096832)>', '<ExcThread(monitor, started 140356142216960)>']
[2026-01-26 14:36:14] 2026-01-26 19:36:08,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:36:14] 2026-01-26 19:36:08,808 | INFO     | [monitor] control thread has ended
[2026-01-26 14:36:14] 2026-01-26 19:36:13,340 | INFO     | all workflow threads have been joined
[2026-01-26 14:36:14] 2026-01-26 19:36:13,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:36:14] 2026-01-26 19:36:13,340 | INFO     | traces error code: 0
[2026-01-26 14:36:14] 2026-01-26 19:36:13,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:36:14] 2026-01-26 19:36:13,494 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:36:14] 2026-01-26 19:36:13,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:36:14] 2026-01-26 19:36:13,534 [wrapper] pilotpid: 187994
[2026-01-26 14:36:14] 2026-01-26 19:36:13,547 [wrapper] Pilot exit status: 0
[2026-01-26 14:36:14] 2026-01-26 19:36:13,734 [wrapper] pandaids: 6983231848
[2026-01-26 14:36:14] 2026-01-26 19:36:13,933 [wrapper] cleanup supervisor_pilot 3053809 187995
[2026-01-26 14:36:14] 2026-01-26 19:36:13,953 [wrapper] Test setup, not cleaning
[2026-01-26 14:36:14] 2026-01-26 19:36:13,972 [wrapper] apfmon messages muted
[2026-01-26 14:36:14] 2026-01-26 19:36:13,981 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:36:14] 2026-01-26 19:36:14,019 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:36:14]  *** Error codes and diagnostics ***
[2026-01-26 14:36:14]     "exeErrorCode": 0,
[2026-01-26 14:36:14]     "exeErrorDiag": "",
[2026-01-26 14:36:14]     "pilotErrorCode": 0,
[2026-01-26 14:36:14]     "pilotErrorDiag": "",
[2026-01-26 14:36:14]  *** Listing of results directory ***
[2026-01-26 14:36:14] total 484312
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 14:36:14] -rwx------. 1 boincer umatlas     36322 Jan 25 11:29 runpilot2-wrapper.sh
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:30 queuedata.json
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas       100 Jan 26 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:36:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 11:29 run_atlas
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas       105 Jan 26 11:29 job.xml
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas 277028138 Jan 26 11:29 EVNT.48329115._000005.pool.root.1
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:29 start_atlas.sh
[2026-01-26 14:36:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 11:29 shared
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas    597775 Jan 26 11:29 input.tar.gz
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas         0 Jan 26 11:29 boinc_lockfile
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas      2613 Jan 26 11:30 pandaJob.out
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas        57 Jan 26 11:30 setup.sh.local
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas   1006276 Jan 26 11:31 agis_schedconf.cvmfs.json
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas       430 Jan 26 11:31 workernode_map.json
[2026-01-26 14:36:14] drwx------. 5 boincer umatlas      4096 Jan 26 11:31 pilot3
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas      7173 Jan 26 14:29 init_data.xml
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas 211262695 Jan 26 14:34 HITS.48329117._000119.pool.root.1
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas       530 Jan 26 14:34 boinc_task_state.xml
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas      1049 Jan 26 14:34 memory_monitor_summary.json
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas   1516246 Jan 26 14:35 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas    447938 Jan 26 14:35 log.48329117._000119.job.log.tgz.1
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas      6350 Jan 26 14:35 heartbeat.json
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas        95 Jan 26 14:35 pilot_heartbeat.json
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas      5621 Jan 26 14:36 pilotlog.txt
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas        28 Jan 26 14:36 wrapper_checkpoint.txt
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 14:36 boinc_mmap_file
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas   1405523 Jan 26 14:36 log.48329117._000119.job.log.1
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas       357 Jan 26 14:36 output.list
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas       620 Jan 26 14:36 runtime_log
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas   1873920 Jan 26 14:36 result.tar.gz
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas       657 Jan 26 14:36 sJ5MDmrAI48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6L1KDmM3wvcn.diag
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas      9334 Jan 26 14:36 runtime_log.err
[2026-01-26 14:36:14] -rw-r--r--. 1 boincer umatlas     12399 Jan 26 14:36 stderr.txt
[2026-01-26 14:36:14] HITS file was successfully produced:
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas 211262695 Jan 26 14:34 shared/HITS.pool.root.1
[2026-01-26 14:36:14]  *** Contents of shared directory: ***
[2026-01-26 14:36:14] total 479284
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas 277028138 Jan 26 11:29 ATLAS.root_0
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:29 start_atlas.sh
[2026-01-26 14:36:14] -rw-r--r--. 2 boincer umatlas    597775 Jan 26 11:29 input.tar.gz
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas 211262695 Jan 26 14:34 HITS.pool.root.1
[2026-01-26 14:36:14] -rw-------. 1 boincer umatlas   1873920 Jan 26 14:36 result.tar.gz
14:36:16 (172277): run_atlas exited; CPU time 44991.460049
14:36:16 (172277): called boinc_finish(0)

</stderr_txt>
]]>

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