Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:52:14 (2496083): wrapper (7.7.26015): starting
07:52:14 (2496083): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 07:52:14] Arguments: --nthreads 4
[2026-01-27 07:52:14] Threads: 4
[2026-01-27 07:52:14] Checking for CVMFS
[2026-01-27 07:52:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 07:52:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 07:52:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 07:52:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 07:52:14] 2.13.3.0 2295620 131 50360 155586 0 187 4830558 6144000 3364 130560 0 436399 99.995 5644 681 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-27 07:52:14] CVMFS is ok
[2026-01-27 07:52:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 07:52:14] Checking for apptainer binary...
[2026-01-27 07:52:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 07:52:14] Running /usr/bin/apptainer --version
[2026-01-27 07:52:14] apptainer version 1.4.5
[2026-01-27 07:52:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 07:52:15] Starfish-Cruncher
[2026-01-27 07:52:15] apptainer works
[2026-01-27 07:52:15] Set ATHENA_PROC_NUMBER=4
[2026-01-27 07:52:15] Set ATHENA_CORE_NUMBER=4
[2026-01-27 07:52:15] Starting ATLAS job with PandaID=6983015894
[2026-01-27 07:52:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 10:05:42]  *** The last 200 lines of the pilot log: ***
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | this job has now completed (state=finished)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | log transfer has been attempted: DONE
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | job 6983015894 has finished - writing final server update
[2026-01-27 10:05:42] 2026-01-27 16:04:47,592 | INFO     | total number of processed events: 400 (read)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,597 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6983015894/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,597 | INFO     | extracted standard info from prmon json
[2026-01-27 10:05:42] 2026-01-27 16:04:47,597 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 10:05:42] 2026-01-27 16:04:47,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 10:05:42] 2026-01-27 16:04:47,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 10:05:42] 2026-01-27 16:04:47,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 10:05:42] 2026-01-27 16:04:47,599 | INFO     | fitting pss+swap vs Time
[2026-01-27 10:05:42] 2026-01-27 16:04:47,600 | INFO     | sum of square deviations: 681212772.5
[2026-01-27 10:05:42] 2026-01-27 16:04:47,600 | INFO     | sum of deviations: 10604982339.5
[2026-01-27 10:05:42] 2026-01-27 16:04:47,600 | INFO     | mean x: 1769525892.5
[2026-01-27 10:05:42] 2026-01-27 16:04:47,600 | INFO     | mean y: 2292254.469230769
[2026-01-27 10:05:42] 2026-01-27 16:04:47,600 | INFO     | intersect: -27545328102.64977
[2026-01-27 10:05:42] 2026-01-27 16:04:47,601 | INFO     | chi2: 1.099882861581881
[2026-01-27 10:05:42] 2026-01-27 16:04:47,601 | INFO     | sum of square deviations: 605592750.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,601 | INFO     | sum of deviations: 10105794360.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,601 | INFO     | mean x: 1769525740.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | mean y: 2291246.616
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | intersect: -29526568276.82913
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | chi2: 1.1012308666283703
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | current chi2=1.1012308666283703 (change=-0.12255896455651799 %)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | right removable region: 124
[2026-01-27 10:05:42] 2026-01-27 16:04:47,602 | INFO     | sum of square deviations: 605592750.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | sum of deviations: -1292718221.9999998
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | mean x: 1769526045.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | mean y: 2315623.248
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | intersect: 3779604176.776905
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | chi2: 0.0033828662256053803
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | current chi2=0.0033828662256053803 (change=99.69243395421762 %)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,603 | INFO     | sum of square deviations: 535786790.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | sum of deviations: -1083282469.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | mean x: 1769526197.5
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | mean y: 2315157.9
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | intersect: 3580038132.7198567
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | chi2: 0.0033053291255506685
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | current chi2=0.0033053291255506685 (change=2.292053391524112 %)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | left removable region: 20
[2026-01-27 10:05:42] 2026-01-27 16:04:47,604 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | sum of deviations: -876142.9999999739
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | mean x: 1769526319.5
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | mean y: 2311907.0576923075
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | intersect: 6757131.923495851
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | chi2: 0.0015402148567576518
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | current memory leak: -0.00 B/s (using 104 data points, chi2=0.00)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | could have reported an average CPU frequency of 3888 MHz (8 samples)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,605 | INFO     | ..............................
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . Timing measurements:
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . get job = 0 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . initial setup = 3 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . payload setup = 2 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . stage-in = 0 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . payload execution = 7927 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . stage-out = 0 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | . log creation = 0 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,606 | INFO     | ..............................
[2026-01-27 10:05:42] 2026-01-27 16:04:47,933 | INFO     | 
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | job summary report
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | --------------------------------------------------
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | PanDA job id: 6983015894
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | task id: 48317931
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | errors: (none)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | pilot state: finished 
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | transexitcode: 0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | exeerrorcode: 0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | exeerrordiag: 
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | exitcode: 0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | exitmsg: OK
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | cpuconsumptiontime: 30276 s
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | nevents: 400
[2026-01-27 10:05:42] 2026-01-27 16:04:47,934 | INFO     | neventsw: 0
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | pid: 2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | pgrp: 2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | corecount: 4
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | event service: False
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | sizes: {0: 2283919, 1: 2284181, 11: 2284209, 7933: 2311999, 7934: 2321205}
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | --------------------------------------------------
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | 
[2026-01-27 10:05:42] 2026-01-27 16:04:47,935 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 10:05:42] 2026-01-27 16:04:47,952 | INFO     | job 6983015894 has completed (purged errors)
[2026-01-27 10:05:42] 2026-01-27 16:04:47,953 | INFO     | overall cleanup function is called
[2026-01-27 10:05:42] 2026-01-27 16:04:48,960 | INFO     | --- collectZombieJob: --- 10, [2517782]
[2026-01-27 10:05:42] 2026-01-27 16:04:48,960 | INFO     | zombie collector waiting for pid 2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:48,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 10:05:42] 2026-01-27 16:04:48,960 | INFO     | collected zombie processes
[2026-01-27 10:05:42] 2026-01-27 16:04:48,960 | INFO     | will attempt to kill all subprocesses of pid=2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:49,121 | INFO     | process IDs to be killed: [2517782] (in reverse order)
[2026-01-27 10:05:42] 2026-01-27 16:04:49,180 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 10:05:42] 2026-01-27 16:04:49,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 10:05:42] 2026-01-27 16:04:49,185 | INFO     | did not find any defunct processes belonging to 2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:49,189 | INFO     | did not find any defunct processes belonging to 2517782
[2026-01-27 10:05:42] 2026-01-27 16:04:49,189 | INFO     | ready for new job
[2026-01-27 10:05:42] 2026-01-27 16:04:49,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 10:05:42] 2026-01-27 16:04:49,191 | INFO     | **************************************
[2026-01-27 10:05:42] 2026-01-27 16:04:49,191 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 10:05:42] 2026-01-27 16:04:49,191 | INFO     | **************************************
[2026-01-27 10:05:42] 2026-01-27 16:04:49,191 | INFO     | 
[2026-01-27 10:05:42] 2026-01-27 16:04:49,192 | INFO     | architecture information:
[2026-01-27 10:05:42] 2026-01-27 16:04:49,193 | INFO     | executing command: cat /etc/os-release
[2026-01-27 10:05:42] 2026-01-27 16:04:49,204 | INFO     | cat /etc/os-release:
[2026-01-27 10:05:42] NAME="CentOS Linux"
[2026-01-27 10:05:42] VERSION="7 (Core)"
[2026-01-27 10:05:42] ID="centos"
[2026-01-27 10:05:42] ID_LIKE="rhel fedora"
[2026-01-27 10:05:42] VERSION_ID="7"
[2026-01-27 10:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 10:05:42] ANSI_COLOR="0;31"
[2026-01-27 10:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 10:05:42] HOME_URL="https://www.centos.org/"
[2026-01-27 10:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 10:05:42] 
[2026-01-27 10:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 10:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 10:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 10:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 10:05:42] 
[2026-01-27 10:05:42] 2026-01-27 16:04:49,205 | INFO     | **************************************
[2026-01-27 10:05:42] 2026-01-27 16:04:49,707 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-27 10:05:42] 2026-01-27 16:04:49,719 | INFO     | sufficient remaining disk space (1803516116992 B)
[2026-01-27 10:05:42] 2026-01-27 16:04:49,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 10:05:42] 2026-01-27 16:04:49,720 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 10:05:42] 2026-01-27 16:04:49,720 | INFO     | update_server=False
[2026-01-27 10:05:42] 2026-01-27 16:04:49,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 10:05:42] 2026-01-27 16:04:49,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 10:05:42] 2026-01-27 16:04:49,725 | WARNING  | process 2517782 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 10:05:42] 2026-01-27 16:04:49,767 | INFO     | all data control threads have been joined
[2026-01-27 10:05:42] 2026-01-27 16:04:49,844 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 10:05:42] 2026-01-27 16:04:50,012 | INFO     | number of running child processes to parent process 2517782: 1
[2026-01-27 10:05:42] 2026-01-27 16:04:50,012 | INFO     | maximum number of monitored processes: 6
[2026-01-27 10:05:42] 2026-01-27 16:04:50,013 | INFO     | aborting job monitoring since job object (job id=6983015894) has expired
[2026-01-27 10:05:42] 2026-01-27 16:04:50,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 10:05:42] 2026-01-27 16:04:50,013 | INFO     | will abort loop
[2026-01-27 10:05:42] 2026-01-27 16:04:50,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 10:05:42] 2026-01-27 16:04:50,515 | INFO     | all payload control threads have been joined
[2026-01-27 10:05:42] 2026-01-27 16:04:50,651 | INFO     | all job control threads have been joined
[2026-01-27 10:05:42] 2026-01-27 16:04:50,725 | INFO     | [job] retrieve thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:50,768 | INFO     | [payload] validate_post thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:50,772 | INFO     | [data] control thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,013 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,018 | INFO     | [job] job monitor thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,520 | INFO     | [payload] control thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,656 | INFO     | [job] control thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,905 | INFO     | [payload] failed_post thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:51,955 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:52,014 | INFO     | [job] validate thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:52,106 | INFO     | [data] copytool_out thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:52,123 | INFO     | [data] copytool_in thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:52,123 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:52,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 10:05:42] 2026-01-27 16:04:53,683 | INFO     | [job] queue monitor thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:04:53,726 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 10:05:42] 2026-01-27 16:05:20,553 | INFO     | PID=2502336 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 10:05:42] 2026-01-27 16:05:20,553 | INFO     | .. there are 8 such processes running
[2026-01-27 10:05:42] 2026-01-27 16:05:20,553 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 10:05:42] 2026-01-27 16:05:20,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 10:05:42] 2026-01-27 16:05:20,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 10:05:42] 2026-01-27 16:05:35,158 | INFO     | [monitor] cgroup control has ended
[2026-01-27 10:05:42] 2026-01-27 16:05:37,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136312206939968)>', '<ExcThread(monitor, started 136311541307136)>']
[2026-01-27 10:05:42] 2026-01-27 16:05:37,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 10:05:42] 2026-01-27 16:05:37,638 | INFO     | [monitor] control thread has ended
[2026-01-27 10:05:42] 2026-01-27 16:05:42,106 | INFO     | all workflow threads have been joined
[2026-01-27 10:05:42] 2026-01-27 16:05:42,106 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 10:05:42] 2026-01-27 16:05:42,106 | INFO     | traces error code: 0
[2026-01-27 10:05:42] 2026-01-27 16:05:42,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 10:05:42] 2026-01-27 16:05:42,181 [wrapper] ==== pilot stdout END ====
[2026-01-27 10:05:42] 2026-01-27 16:05:42,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 10:05:42] 2026-01-27 16:05:42,186 [wrapper] pilotpid: 2502336
[2026-01-27 10:05:42] 2026-01-27 16:05:42,188 [wrapper] Pilot exit status: 0
[2026-01-27 10:05:42] 2026-01-27 16:05:42,194 [wrapper] pandaids: 6983015894
[2026-01-27 10:05:42] 2026-01-27 16:05:42,234 [wrapper] cleanup supervisor_pilot 2612828 2502337
[2026-01-27 10:05:42] 2026-01-27 16:05:42,236 [wrapper] Test setup, not cleaning
[2026-01-27 10:05:42] 2026-01-27 16:05:42,239 [wrapper] apfmon messages muted
[2026-01-27 10:05:42] 2026-01-27 16:05:42,241 [wrapper] ==== wrapper stdout END ====
[2026-01-27 10:05:42] 2026-01-27 16:05:42,243 [wrapper] ==== wrapper stderr END ====
[2026-01-27 10:05:42]  *** Error codes and diagnostics ***
[2026-01-27 10:05:42]     "exeErrorCode": 0,
[2026-01-27 10:05:42]     "exeErrorDiag": "",
[2026-01-27 10:05:42]     "pilotErrorCode": 0,
[2026-01-27 10:05:42]     "pilotErrorDiag": "",
[2026-01-27 10:05:42]  *** Listing of results directory ***
[2026-01-27 10:05:42] total 674068
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc    584422 Jan 25 08:11 pilot3.tar.gz
[2026-01-27 10:05:42] -rwx------ 1 boinc boinc     36322 Jan 25 08:11 runpilot2-wrapper.sh
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc      5111 Jan 25 08:11 queuedata.json
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc       100 Jan 27 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 10:05:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 07:52 run_atlas
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc       105 Jan 27 07:52 job.xml
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc     15845 Jan 27 07:52 start_atlas.sh
[2026-01-27 10:05:42] drwxrwx--x 2 boinc boinc      4096 Jan 27 07:52 shared
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc    597754 Jan 27 07:52 input.tar.gz
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc      9664 Jan 27 07:52 init_data.xml
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc 498665641 Jan 27 07:52 EVNT.48317929._000024.pool.root.1
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc         0 Jan 27 07:52 boinc_lockfile
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc      2507 Jan 27 07:52 pandaJob.out
[2026-01-27 10:05:42] -rw------- 1 boinc boinc   1004835 Jan 27 07:52 agis_schedconf.cvmfs.json
[2026-01-27 10:05:42] -rw------- 1 boinc boinc   1516246 Jan 27 07:52 agis_ddmendpoints.agis.ALL.json
[2026-01-27 10:05:42] -rw------- 1 boinc boinc       433 Jan 27 07:52 workernode_map.json
[2026-01-27 10:05:42] drwx------ 5 boinc boinc      4096 Jan 27 07:52 pilot3
[2026-01-27 10:05:42] -rw------- 1 boinc boinc 184722756 Jan 27 10:04 HITS.48317931._001171.pool.root.1
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc       530 Jan 27 10:04 boinc_task_state.xml
[2026-01-27 10:05:42] -rw------- 1 boinc boinc        95 Jan 27 10:04 pilot_heartbeat.json
[2026-01-27 10:05:42] -rw------- 1 boinc boinc      1022 Jan 27 10:04 memory_monitor_summary.json
[2026-01-27 10:05:42] -rw------- 1 boinc boinc    306633 Jan 27 10:04 log.48317931._001171.job.log.tgz.1
[2026-01-27 10:05:42] -rw------- 1 boinc boinc      6305 Jan 27 10:04 heartbeat.json
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc        27 Jan 27 10:05 wrapper_checkpoint.txt
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc      8192 Jan 27 10:05 boinc_mmap_file
[2026-01-27 10:05:42] -rw------- 1 boinc boinc      5356 Jan 27 10:05 pilotlog.txt
[2026-01-27 10:05:42] -rw------- 1 boinc boinc   1148413 Jan 27 10:05 log.48317931._001171.job.log.1
[2026-01-27 10:05:42] -rw------- 1 boinc boinc       357 Jan 27 10:05 output.list
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc       620 Jan 27 10:05 runtime_log
[2026-01-27 10:05:42] -rw------- 1 boinc boinc   1474560 Jan 27 10:05 result.tar.gz
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc      8932 Jan 27 10:05 runtime_log.err
[2026-01-27 10:05:42] -rw------- 1 boinc boinc       652 Jan 27 10:05 BKlLDmB1F48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmo10KDmJZsXxm.diag
[2026-01-27 10:05:42] -rw-r--r-- 1 boinc boinc     20960 Jan 27 10:05 stderr.txt
[2026-01-27 10:05:42] HITS file was successfully produced:
[2026-01-27 10:05:42] -rw------- 1 boinc boinc 184722756 Jan 27 10:04 shared/HITS.pool.root.1
[2026-01-27 10:05:42]  *** Contents of shared directory: ***
[2026-01-27 10:05:42] total 669424
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc     15845 Jan 27 07:52 start_atlas.sh
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc    597754 Jan 27 07:52 input.tar.gz
[2026-01-27 10:05:42] -rw-r--r-- 2 boinc boinc 498665641 Jan 27 07:52 ATLAS.root_0
[2026-01-27 10:05:42] -rw------- 1 boinc boinc 184722756 Jan 27 10:04 HITS.pool.root.1
[2026-01-27 10:05:42] -rw------- 1 boinc boinc   1474560 Jan 27 10:05 result.tar.gz
10:05:43 (2496083): run_atlas exited; CPU time 30391.546081
10:05:43 (2496083): called boinc_finish(0)

</stderr_txt>
]]>

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