Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:20:49 (3672026): wrapper (7.7.26015): starting
11:20:49 (3672026): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 11:20:49] Arguments: --nthreads 9
[2026-01-26 11:20:49] Threads: 9
[2026-01-26 11:20:49] Checking for CVMFS
[2026-01-26 11:20:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:20:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:20:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:20:49] 2.13.3.0 2295398 41593 109376 155553 3 184 19045227 37030912 1832 16776704 0 28199993 99.970 1815768 34787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 11:20:49] CVMFS is ok
[2026-01-26 11:20:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:20:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:20:49] Further information can be found at the LHC@home message board.
[2026-01-26 11:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:20:49] Checking for apptainer binary...
[2026-01-26 11:20:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:20:49] Running /usr/bin/apptainer --version
[2026-01-26 11:20:49] apptainer version 1.4.5-2.el9
[2026-01-26 11:20:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:20:49] c-205-36.aglt2.org
[2026-01-26 11:20:49] apptainer works
[2026-01-26 11:20:49] Set ATHENA_PROC_NUMBER=9
[2026-01-26 11:20:49] Set ATHENA_CORE_NUMBER=9
[2026-01-26 11:20:49] Starting ATLAS job with PandaID=6983015701
[2026-01-26 11:20:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:48:26]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:48:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 12:48:26]  is_altstaged=None
[2026-01-26 12:48:26]  is_tar=False
[2026-01-26 12:48:26]  lfn=log.48317931._001052.job.log.tgz.1
[2026-01-26 12:48:26]  mtime=0
[2026-01-26 12:48:26]  protocol_id=None
[2026-01-26 12:48:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 12:48:26]  replicas=None
[2026-01-26 12:48:26]  scope=mc23_13p6TeV
[2026-01-26 12:48:26]  status=None
[2026-01-26 12:48:26]  status_code=0
[2026-01-26 12:48:26]  storage_token=
[2026-01-26 12:48:26]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6983015701/log.48317931._001052.job.log.tgz.1
[2026-01-26 12:48:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/17/log.48317931._001052.job.log.tgz.1
[2026-01-26 12:48:26]  workdir=None
[2026-01-26 12:48:26] ]
[2026-01-26 12:48:26] 2026-01-26 17:47:51,673 | INFO     | transferring file log.48317931._001052.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6983015701/log.48317931._001052.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 12:48:26] 2026-01-26 17:47:51,673 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6983015701/log.48317931._001052.job.log.tgz.1 /tmp/boinchome/slots/1/log.48317931._001052.job
[2026-01-26 12:48:26] 2026-01-26 17:47:51,684 | INFO     | adding to output.list: log.48317931._001052.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/17/log.48317931._001052.job.log.tg
[2026-01-26 12:48:26] 2026-01-26 17:47:51,684 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 12:48:26] 2026-01-26 17:47:51,684 | INFO     | summary of transferred files:
[2026-01-26 12:48:26] 2026-01-26 17:47:51,684 | INFO     |  -- lfn=log.48317931._001052.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 12:48:26] 2026-01-26 17:47:51,685 | INFO     | stage-out finished correctly
[2026-01-26 12:48:26] 2026-01-26 17:47:51,737 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 12:48:26] 2026-01-26 17:47:52,753 | INFO     | time since job start (5208s) is within the limit (349056.0s)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,703 | INFO     | job 6983015701 has state=finished
[2026-01-26 12:48:26] 2026-01-26 17:47:53,703 | INFO     | preparing for final server update for job 6983015701 in state='finished'
[2026-01-26 12:48:26] 2026-01-26 17:47:53,704 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6983015701/jobReport.json
[2026-01-26 12:48:26] 2026-01-26 17:47:53,705 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-26 12:48:26] 2026-01-26 17:47:53,705 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,705 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,706 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:48:26] 2026-01-26 17:47:53,706 | INFO     | job 6983015701 has finished - writing final server update
[2026-01-26 12:48:26] 2026-01-26 17:47:53,706 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,709 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983015701/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,710 | INFO     | extracted standard info from prmon json
[2026-01-26 12:48:26] 2026-01-26 17:47:53,710 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:48:26] 2026-01-26 17:47:53,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:48:26] 2026-01-26 17:47:53,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:48:26] 2026-01-26 17:47:53,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:48:26] 2026-01-26 17:47:53,711 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | sum of square deviations: 147126479.5
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | sum of deviations: -3646610133.999999
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | mean x: 1769447137.5
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | mean y: 2604241.564102564
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | intersect: 43859317765.28292
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | chi2: 0.053617745069118324
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | current memory leak: -24.79 B/s (using 78 data points, chi2=0.05)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,712 | INFO     | could have reported an average CPU frequency of 2656 MHz (6 samples)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | ..............................
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . Timing measurements:
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . get job = 0 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . initial setup = 6 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . payload setup = 5 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . stage-in = 0 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . payload execution = 5187 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . stage-out = 0 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | . log creation = 0 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,713 | INFO     | ..............................
[2026-01-26 12:48:26] 2026-01-26 17:47:53,764 | INFO     | 
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | job summary report
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | --------------------------------------------------
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | PanDA job id: 6983015701
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | task id: 48317931
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | errors: (none)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | pilot state: finished 
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | transexitcode: 0
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | exeerrorcode: 0
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | exeerrordiag: 
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | exitcode: 0
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | exitmsg: OK
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | cpuconsumptiontime: 42612 s
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | nevents: 400
[2026-01-26 12:48:26] 2026-01-26 17:47:53,765 | INFO     | neventsw: 0
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | pid: 3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | pgrp: 3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | corecount: 9
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | event service: False
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | sizes: {0: 2283743, 1: 2284204, 11: 2284204, 5196: 2310668, 5197: 2319722, 5199: 2319860}
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | --------------------------------------------------
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | 
[2026-01-26 12:48:26] 2026-01-26 17:47:53,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 12:48:26] 2026-01-26 17:47:53,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | job 6983015701 has completed (purged errors)
[2026-01-26 12:48:26] 2026-01-26 17:47:53,779 | INFO     | overall cleanup function is called
[2026-01-26 12:48:26] 2026-01-26 17:47:54,784 | INFO     | --- collectZombieJob: --- 10, [3680175]
[2026-01-26 12:48:26] 2026-01-26 17:47:54,784 | INFO     | zombie collector waiting for pid 3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:54,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:48:26] 2026-01-26 17:47:54,784 | INFO     | collected zombie processes
[2026-01-26 12:48:26] 2026-01-26 17:47:54,784 | INFO     | will attempt to kill all subprocesses of pid=3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:54,898 | INFO     | process IDs to be killed: [3680175] (in reverse order)
[2026-01-26 12:48:26] 2026-01-26 17:47:54,932 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:48:26] 2026-01-26 17:47:54,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:48:26] 2026-01-26 17:47:54,936 | INFO     | did not find any defunct processes belonging to 3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:54,938 | INFO     | did not find any defunct processes belonging to 3680175
[2026-01-26 12:48:26] 2026-01-26 17:47:54,938 | INFO     | ready for new job
[2026-01-26 12:48:26] 2026-01-26 17:47:54,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:48:26] 2026-01-26 17:47:54,940 | INFO     | **************************************
[2026-01-26 12:48:26] 2026-01-26 17:47:54,940 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:48:26] 2026-01-26 17:47:54,940 | INFO     | **************************************
[2026-01-26 12:48:26] 2026-01-26 17:47:54,940 | INFO     | 
[2026-01-26 12:48:26] 2026-01-26 17:47:54,941 | INFO     | architecture information:
[2026-01-26 12:48:26] 2026-01-26 17:47:54,941 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:48:26] 2026-01-26 17:47:54,949 | INFO     | cat /etc/os-release:
[2026-01-26 12:48:26] NAME="CentOS Linux"
[2026-01-26 12:48:26] VERSION="7 (Core)"
[2026-01-26 12:48:26] ID="centos"
[2026-01-26 12:48:26] ID_LIKE="rhel fedora"
[2026-01-26 12:48:26] VERSION_ID="7"
[2026-01-26 12:48:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:48:26] ANSI_COLOR="0;31"
[2026-01-26 12:48:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:48:26] HOME_URL="https://www.centos.org/"
[2026-01-26 12:48:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:48:26] 
[2026-01-26 12:48:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:48:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:48:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:48:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:48:26] 
[2026-01-26 12:48:26] 2026-01-26 17:47:54,949 | INFO     | **************************************
[2026-01-26 12:48:26] 2026-01-26 17:47:55,452 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 12:48:26] 2026-01-26 17:47:55,461 | INFO     | sufficient remaining disk space (39395000320 B)
[2026-01-26 12:48:26] 2026-01-26 17:47:55,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:48:26] 2026-01-26 17:47:55,461 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:48:26] 2026-01-26 17:47:55,462 | INFO     | update_server=False
[2026-01-26 12:48:26] 2026-01-26 17:47:55,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:48:26] 2026-01-26 17:47:55,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:48:26] 2026-01-26 17:47:55,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:48:26] 2026-01-26 17:47:56,467 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:56,467 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:56,475 | INFO     | all data control threads have been joined
[2026-01-26 12:48:26] 2026-01-26 17:47:56,560 | INFO     | all job control threads have been joined
[2026-01-26 12:48:26] 2026-01-26 17:47:56,609 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:56,646 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:56,740 | INFO     | all payload control threads have been joined
[2026-01-26 12:48:26] 2026-01-26 17:47:56,802 | WARNING  | process 3680175 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 12:48:26] 2026-01-26 17:47:56,893 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:48:26] 2026-01-26 17:47:56,915 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:56,985 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,006 | INFO     | number of running child processes to parent process 3680175: 1
[2026-01-26 12:48:26] 2026-01-26 17:47:57,006 | INFO     | maximum number of monitored processes: 6
[2026-01-26 12:48:26] 2026-01-26 17:47:57,006 | INFO     | aborting job monitoring since job object (job id=6983015701) has expired
[2026-01-26 12:48:26] 2026-01-26 17:47:57,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:48:26] 2026-01-26 17:47:57,006 | INFO     | will abort loop
[2026-01-26 12:48:26] 2026-01-26 17:47:57,467 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,477 | INFO     | [data] control thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,565 | INFO     | [job] control thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,595 | INFO     | [job] validate thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,745 | INFO     | [payload] control thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,784 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:57,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:48:26] 2026-01-26 17:47:57,917 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:47:58,011 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:48:01,818 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:48:05,585 | INFO     | job.realtimelogging is not enabled
[2026-01-26 12:48:26] 2026-01-26 17:48:06,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:48:26] 2026-01-26 17:48:11,602 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:48:26] 2026-01-26 17:48:11,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336571660096)>', '<ExcThread(monitor, started 140336068273920)>']
[2026-01-26 12:48:26] 2026-01-26 17:48:16,816 | INFO     | all workflow threads have been joined
[2026-01-26 12:48:26] 2026-01-26 17:48:16,816 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:48:26] 2026-01-26 17:48:16,816 | INFO     | traces error code: 0
[2026-01-26 12:48:26] 2026-01-26 17:48:16,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:48:26] 2026-01-26 17:48:26,001 | INFO     | PID=3675723 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 12:48:26] 2026-01-26 17:48:26,002 | INFO     | .. there are 3 such processes running
[2026-01-26 12:48:26] 2026-01-26 17:48:26,002 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:48:26] 2026-01-26 17:48:26,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:48:26] 2026-01-26 17:48:26,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:48:26] 2026-01-26 17:48:26,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:48:26] 2026-01-26 17:48:26,003 | INFO     | [monitor] control thread has ended
[2026-01-26 12:48:26] 2026-01-26 17:48:26,071 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:48:26] 2026-01-26 17:48:26,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:48:26] 2026-01-26 17:48:26,074 [wrapper] pilotpid: 3675723
[2026-01-26 12:48:26] 2026-01-26 17:48:26,076 [wrapper] Pilot exit status: 0
[2026-01-26 12:48:26] 2026-01-26 17:48:26,082 [wrapper] pandaids: 6983015701
[2026-01-26 12:48:26] 2026-01-26 17:48:26,105 [wrapper] cleanup supervisor_pilot 3737306 3675724
[2026-01-26 12:48:26] 2026-01-26 17:48:26,107 [wrapper] Test setup, not cleaning
[2026-01-26 12:48:26] 2026-01-26 17:48:26,109 [wrapper] apfmon messages muted
[2026-01-26 12:48:26] 2026-01-26 17:48:26,110 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:48:26] 2026-01-26 17:48:26,112 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:48:26]  *** Error codes and diagnostics ***
[2026-01-26 12:48:26]     "exeErrorCode": 0,
[2026-01-26 12:48:26]     "exeErrorDiag": "",
[2026-01-26 12:48:26]     "pilotErrorCode": 0,
[2026-01-26 12:48:26]     "pilotErrorDiag": "",
[2026-01-26 12:48:26]  *** Listing of results directory ***
[2026-01-26 12:48:26] total 672640
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 09:11 pilot3.tar.gz
[2026-01-26 12:48:26] -rwx------. 1 boincer umatlas     36322 Jan 25 09:14 runpilot2-wrapper.sh
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 09:18 queuedata.json
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas       100 Jan 26 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:48:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 11:20 run_atlas
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas       105 Jan 26 11:20 job.xml
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas 500370369 Jan 26 11:20 EVNT.48317929._000021.pool.root.1
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas    597757 Jan 26 11:20 input.tar.gz
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:20 start_atlas.sh
[2026-01-26 12:48:26] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 11:20 shared
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas         0 Jan 26 11:20 boinc_lockfile
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas      2508 Jan 26 11:20 pandaJob.out
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas   1006276 Jan 26 11:20 agis_schedconf.cvmfs.json
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas   1516246 Jan 26 11:20 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas       431 Jan 26 11:21 workernode_map.json
[2026-01-26 12:48:26] drwx------. 5 boincer umatlas      4096 Jan 26 11:21 pilot3
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas      6530 Jan 26 12:37 init_data.xml
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas 182174625 Jan 26 12:47 HITS.48317931._001052.pool.root.1
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas       530 Jan 26 12:47 boinc_task_state.xml
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas      1031 Jan 26 12:47 memory_monitor_summary.json
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas    381581 Jan 26 12:47 log.48317931._001052.job.log.tgz.1
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas      6369 Jan 26 12:47 heartbeat.json
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 12:48 boinc_mmap_file
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas        27 Jan 26 12:48 wrapper_checkpoint.txt
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas        95 Jan 26 12:48 pilot_heartbeat.json
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas       822 Jan 26 12:48 pilotlog.txt
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas    768268 Jan 26 12:48 log.48317931._001052.job.log.1
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas       357 Jan 26 12:48 output.list
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas       620 Jan 26 12:48 runtime_log
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas   1167360 Jan 26 12:48 result.tar.gz
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas      8816 Jan 26 12:48 runtime_log.err
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas       650 Jan 26 12:48 82uNDmw3F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTo7KDmYOEh7n.diag
[2026-01-26 12:48:26] -rw-r--r--. 1 boincer umatlas     21422 Jan 26 12:48 stderr.txt
[2026-01-26 12:48:26] HITS file was successfully produced:
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas 182174625 Jan 26 12:47 shared/HITS.pool.root.1
[2026-01-26 12:48:26]  *** Contents of shared directory: ***
[2026-01-26 12:48:26] total 668300
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas 500370369 Jan 26 11:20 ATLAS.root_0
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas    597757 Jan 26 11:20 input.tar.gz
[2026-01-26 12:48:26] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:20 start_atlas.sh
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas 182174625 Jan 26 12:47 HITS.pool.root.1
[2026-01-26 12:48:26] -rw-------. 1 boincer umatlas   1167360 Jan 26 12:48 result.tar.gz
12:48:27 (3672026): run_atlas exited; CPU time 42723.200596
12:48:27 (3672026): called boinc_finish(0)

</stderr_txt>
]]>

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