Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:23:51 (13429): wrapper (7.7.26015): starting
00:23:51 (13429): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:23:51] Arguments: --nthreads 8
[2026-01-27 00:23:51] Threads: 8
[2026-01-27 00:23:51] Checking for CVMFS
[2026-01-27 00:23:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:23:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:23:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:23:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:23:55] 2.11.2.0 16892 60540 131920 155566 3 93 19176989 25165825 1088 130560 0 15697772 99.721 17036970 3421 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 00:23:55] CVMFS is ok
[2026-01-27 00:23:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:23:55] Checking for apptainer binary...
[2026-01-27 00:23:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:23:55] Running /usr/bin/apptainer --version
[2026-01-27 00:23:55] apptainer version 1.3.2-1.el7
[2026-01-27 00:23:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:24:12] cg-vwn499.simple-grid.lan
[2026-01-27 00:24:12] apptainer works
[2026-01-27 00:24:12] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:24:12] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:24:12] Starting ATLAS job with PandaID=6983466542
[2026-01-27 00:24:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:32:53]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:32:53] 2026-01-27 07:32:07,026 | INFO     | chi2: 6.400341550578404
[2026-01-27 08:32:53] 2026-01-27 07:32:07,026 | INFO     | sum of square deviations: 30776510072.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,038 | INFO     | sum of deviations: 193908283398.00003
[2026-01-27 08:32:53] 2026-01-27 07:32:07,038 | INFO     | mean x: 1769484664.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,039 | INFO     | mean y: 2488326.3693304537
[2026-01-27 08:32:53] 2026-01-27 07:32:07,039 | INFO     | intersect: -11146200491.583752
[2026-01-27 08:32:53] 2026-01-27 07:32:07,039 | INFO     | chi2: 5.637578264971537
[2026-01-27 08:32:53] 2026-01-27 07:32:07,040 | INFO     | current chi2=5.637578264971537 (change=11.917540330920872 %)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,040 | INFO     | right removable region: 462
[2026-01-27 08:32:53] 2026-01-27 07:32:07,040 | INFO     | sum of square deviations: 30776510072.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,047 | INFO     | sum of deviations: 2372381378.0000076
[2026-01-27 08:32:53] 2026-01-27 07:32:07,047 | INFO     | mean x: 1769484969.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,048 | INFO     | mean y: 2508436.725701944
[2026-01-27 08:32:53] 2026-01-27 07:32:07,048 | INFO     | intersect: -133890822.94622882
[2026-01-27 08:32:53] 2026-01-27 07:32:07,048 | INFO     | chi2: 1.9717444207752126
[2026-01-27 08:32:53] 2026-01-27 07:32:07,048 | INFO     | current chi2=1.9717444207752126 (change=69.19313750377863 %)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,049 | INFO     | sum of square deviations: 29790156694.5
[2026-01-27 08:32:53] 2026-01-27 07:32:07,055 | INFO     | sum of deviations: -63312992876.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,056 | INFO     | mean x: 1769485121.5
[2026-01-27 08:32:53] 2026-01-27 07:32:07,060 | INFO     | mean y: 2518553.698689956
[2026-01-27 08:32:53] 2026-01-27 07:32:07,060 | INFO     | intersect: 3763203669.9472146
[2026-01-27 08:32:53] 2026-01-27 07:32:07,061 | INFO     | chi2: 0.9772252273699805
[2026-01-27 08:32:53] 2026-01-27 07:32:07,061 | INFO     | current chi2=0.9772252273699805 (change=50.43854481983148 %)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,062 | INFO     | sum of square deviations: 28825106042.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,068 | INFO     | sum of deviations: -70448353867.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,069 | INFO     | mean x: 1769485274.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,069 | INFO     | mean y: 2519681.1390728476
[2026-01-27 08:32:53] 2026-01-27 07:32:07,069 | INFO     | intersect: 4327129088.07634
[2026-01-27 08:32:53] 2026-01-27 07:32:07,069 | INFO     | chi2: 0.9645645186367076
[2026-01-27 08:32:53] 2026-01-27 07:32:07,070 | INFO     | current chi2=0.9645645186367076 (change=1.2955773529656924 %)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,070 | INFO     | left removable region: 30
[2026-01-27 08:32:53] 2026-01-27 07:32:07,070 | INFO     | sum of square deviations: 24999270588.0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,076 | INFO     | sum of deviations: -1140402960.5000007
[2026-01-27 08:32:53] 2026-01-27 07:32:07,076 | INFO     | mean x: 1769485548.5
[2026-01-27 08:32:53] 2026-01-27 07:32:07,076 | INFO     | mean y: 2518120.034722222
[2026-01-27 08:32:53] 2026-01-27 07:32:07,076 | INFO     | intersect: 83237537.46604523
[2026-01-27 08:32:53] 2026-01-27 07:32:07,077 | INFO     | chi2: 0.08846328191308324
[2026-01-27 08:32:53] 2026-01-27 07:32:07,077 | INFO     | current memory leak: -0.05 B/s (using 432 data points, chi2=0.09)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,078 | INFO     | could have reported an average CPU frequency of 2249 MHz (19 samples)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,078 | INFO     | ..............................
[2026-01-27 08:32:53] 2026-01-27 07:32:07,078 | INFO     | . Timing measurements:
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . get job = 0 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . initial setup = 123 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . payload setup = 167 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . stage-in = 0 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . payload execution = 28683 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . stage-out = 4 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | . log creation = 1 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,079 | INFO     | ..............................
[2026-01-27 08:32:53] 2026-01-27 07:32:07,098 | INFO     | time since job start (28872s) is within the limit (349056.0s)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,224 | WARNING  | process 21885 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 08:32:53] 2026-01-27 07:32:07,225 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6983466542/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,226 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2817010 B
[2026-01-27 08:32:53] 2026-01-27 07:32:07,226 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16295 B
[2026-01-27 08:32:53] 2026-01-27 07:32:07,226 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 08:32:53] 2026-01-27 07:32:07,310 | INFO     | 
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | job summary report
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | --------------------------------------------------
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | PanDA job id: 6983466542
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | task id: 48329874
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | errors: (none)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | pilot state: finished 
[2026-01-27 08:32:53] 2026-01-27 07:32:07,311 | INFO     | transexitcode: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | exeerrorcode: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | exeerrordiag: 
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | exitcode: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | exitmsg: OK
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | cpuconsumptiontime: 127838 s
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | nevents: 400
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | neventsw: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | pid: 21885
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | pgrp: 21885
[2026-01-27 08:32:53] 2026-01-27 07:32:07,312 | INFO     | corecount: 8
[2026-01-27 08:32:53] 2026-01-27 07:32:07,313 | INFO     | event service: False
[2026-01-27 08:32:53] 2026-01-27 07:32:07,313 | INFO     | sizes: {0: 2283863, 1: 2284380, 12: 2284380, 28854: 2321647, 28855: 2321646, 28859: 2330700, 28860: 2331078}
[2026-01-27 08:32:53] 2026-01-27 07:32:07,313 | INFO     | --------------------------------------------------
[2026-01-27 08:32:53] 2026-01-27 07:32:07,313 | INFO     | 
[2026-01-27 08:32:53] 2026-01-27 07:32:07,313 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 08:32:53] 2026-01-27 07:32:07,554 | INFO     | sufficient remaining disk space (495934504960 B)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,554 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,555 | INFO     | size of work directory /var/lib/boinc/slots/3/PanDA_Pilot-6983466542: 3266539 B (within 5033164800 B limit)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,555 | INFO     | pfn file=/var/lib/boinc/slots/3/PanDA_Pilot-6983466542/HITS.48329874._000026.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,555 | INFO     | total size of present files: 0 B (workdir size: 3266539 B)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,556 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/3/PanDA_Pilot-6983466542/HITS.48329874._000026.pool.root.1 since it does not exist
[2026-01-27 08:32:53] 2026-01-27 07:32:07,660 | INFO     | number of running child processes to parent process 21885: 1
[2026-01-27 08:32:53] 2026-01-27 07:32:07,660 | INFO     | maximum number of monitored processes: 8
[2026-01-27 08:32:53] 2026-01-27 07:32:07,660 | INFO     | aborting job monitoring since job object (job id=6983466542) has expired
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:32:53] 2026-01-27 07:32:07,830 | INFO     | job 6983466542 has completed (purged errors)
[2026-01-27 08:32:53] 2026-01-27 07:32:07,830 | INFO     | overall cleanup function is called
[2026-01-27 08:32:53] 2026-01-27 07:32:08,838 | INFO     | --- collectZombieJob: --- 10, [21885]
[2026-01-27 08:32:53] 2026-01-27 07:32:08,838 | INFO     | zombie collector waiting for pid 21885
[2026-01-27 08:32:53] 2026-01-27 07:32:08,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:32:53] 2026-01-27 07:32:08,839 | INFO     | collected zombie processes
[2026-01-27 08:32:53] 2026-01-27 07:32:08,839 | INFO     | will attempt to kill all subprocesses of pid=21885
[2026-01-27 08:32:53] 2026-01-27 07:32:08,907 | INFO     | process IDs to be killed: [21885] (in reverse order)
[2026-01-27 08:32:53] 2026-01-27 07:32:09,686 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:32:53] 2026-01-27 07:32:09,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:32:53] 2026-01-27 07:32:09,688 | INFO     | did not find any defunct processes belonging to 21885
[2026-01-27 08:32:53] 2026-01-27 07:32:09,690 | INFO     | did not find any defunct processes belonging to 21885
[2026-01-27 08:32:53] 2026-01-27 07:32:09,690 | INFO     | ready for new job
[2026-01-27 08:32:53] 2026-01-27 07:32:09,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:32:53] 2026-01-27 07:32:09,693 | INFO     | **************************************
[2026-01-27 08:32:53] 2026-01-27 07:32:09,694 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:32:53] 2026-01-27 07:32:09,694 | INFO     | **************************************
[2026-01-27 08:32:53] 2026-01-27 07:32:09,694 | INFO     | 
[2026-01-27 08:32:53] 2026-01-27 07:32:09,695 | INFO     | pilot is running in a VM
[2026-01-27 08:32:53] 2026-01-27 07:32:09,695 | INFO     | architecture information:
[2026-01-27 08:32:53] 2026-01-27 07:32:09,703 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:32:53] 2026-01-27 07:32:09,984 | INFO     | cat /etc/os-release:
[2026-01-27 08:32:53] NAME="CentOS Linux"
[2026-01-27 08:32:53] VERSION="7 (Core)"
[2026-01-27 08:32:53] ID="centos"
[2026-01-27 08:32:53] ID_LIKE="rhel fedora"
[2026-01-27 08:32:53] VERSION_ID="7"
[2026-01-27 08:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:32:53] ANSI_COLOR="0;31"
[2026-01-27 08:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:32:53] HOME_URL="https://www.centos.org/"
[2026-01-27 08:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:32:53] 
[2026-01-27 08:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:32:53] 
[2026-01-27 08:32:53] 2026-01-27 07:32:09,984 | INFO     | **************************************
[2026-01-27 08:32:53] 2026-01-27 07:32:10,487 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 08:32:53] 2026-01-27 07:32:10,740 | INFO     | sufficient remaining disk space (495941844992 B)
[2026-01-27 08:32:53] 2026-01-27 07:32:10,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:32:53] 2026-01-27 07:32:10,741 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:32:53] 2026-01-27 07:32:10,741 | INFO     | update_server=False
[2026-01-27 08:32:53] 2026-01-27 07:32:10,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:32:53] 2026-01-27 07:32:10,934 | INFO     | all payload control threads have been joined
[2026-01-27 08:32:53] 2026-01-27 07:32:11,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:32:53] 2026-01-27 07:32:11,172 | INFO     | aborting loop
[2026-01-27 08:32:53] 2026-01-27 07:32:11,733 | INFO     | all data control threads have been joined
[2026-01-27 08:32:53] 2026-01-27 07:32:11,747 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:11,938 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:11,940 | INFO     | [payload] control thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:32:53] 2026-01-27 07:32:12,178 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,181 | INFO     | [job] validate thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,183 | INFO     | all job control threads have been joined
[2026-01-27 08:32:53] 2026-01-27 07:32:12,226 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,259 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:32:53] 2026-01-27 07:32:12,379 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,462 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,631 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,739 | INFO     | [data] control thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:12,808 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:13,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:32:53] 2026-01-27 07:32:13,189 | INFO     | [job] control thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:13,337 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:14,120 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:17,024 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:32:53] 2026-01-27 07:32:40,250 | INFO     | PID=17430 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 08:32:53] 2026-01-27 07:32:40,250 | INFO     | .. there are 2 such processes running
[2026-01-27 08:32:53] 2026-01-27 07:32:40,251 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:32:53] 2026-01-27 07:32:40,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:32:53] 2026-01-27 07:32:40,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:32:53] 2026-01-27 07:32:43,784 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:32:53] 2026-01-27 07:32:44,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532590573376)>', '<ExcThread(monitor, started 140531925509888)>']
[2026-01-27 08:32:53] 2026-01-27 07:32:45,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:32:53] 2026-01-27 07:32:45,280 | INFO     | [monitor] control thread has ended
[2026-01-27 08:32:53] 2026-01-27 07:32:49,792 | INFO     | all workflow threads have been joined
[2026-01-27 08:32:53] 2026-01-27 07:32:49,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:32:53] 2026-01-27 07:32:49,793 | INFO     | traces error code: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:49,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:32:53] 2026-01-27 07:32:49,961 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:32:53] 2026-01-27 07:32:49,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:32:53] 2026-01-27 07:32:50,030 [wrapper] pilotpid: 17430
[2026-01-27 08:32:53] 2026-01-27 07:32:50,154 [wrapper] Pilot exit status: 0
[2026-01-27 08:32:53] 2026-01-27 07:32:50,713 [wrapper] pandaids: 6983466542
[2026-01-27 08:32:53] 2026-01-27 07:32:51,191 [wrapper] cleanup supervisor_pilot 15032 17431
[2026-01-27 08:32:53] 2026-01-27 07:32:51,216 [wrapper] Test setup, not cleaning
[2026-01-27 08:32:53] 2026-01-27 07:32:51,224 [wrapper] apfmon messages muted
[2026-01-27 08:32:53] 2026-01-27 07:32:51,242 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:32:53] 2026-01-27 07:32:51,254 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:32:53]  *** Error codes and diagnostics ***
[2026-01-27 08:32:53]     "exeErrorCode": 0,
[2026-01-27 08:32:53]     "exeErrorDiag": "",
[2026-01-27 08:32:53]     "pilotErrorCode": 0,
[2026-01-27 08:32:53]     "pilotErrorDiag": "",
[2026-01-27 08:32:53]  *** Listing of results directory ***
[2026-01-27 08:32:53] total 482528
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-27 08:32:53] -rwx------. 1 boinc boinc     36322 Jan 25 23:55 runpilot2-wrapper.sh
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc      5111 Jan 25 23:56 queuedata.json
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc       100 Jan 27 00:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:32:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 00:23 run_atlas
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc       105 Jan 27 00:23 job.xml
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc 275208789 Jan 27 00:23 EVNT.48329871._000002.pool.root.1
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:23 start_atlas.sh
[2026-01-27 08:32:53] drwxrwx--x. 2 boinc boinc        68 Jan 27 00:23 shared
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc    597763 Jan 27 00:23 input.tar.gz
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc      6391 Jan 27 00:23 init_data.xml
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc         0 Jan 27 00:23 boinc_lockfile
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc      2605 Jan 27 00:24 pandaJob.out
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc       415 Jan 27 00:30 workernode_map.json
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc   1006441 Jan 27 00:30 agis_schedconf.cvmfs.json
[2026-01-27 08:32:53] drwx------. 5 boinc boinc      4096 Jan 27 00:30 pilot3
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc 205628911 Jan 27 08:30 HITS.48329874._000026.pool.root.1
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc       531 Jan 27 08:31 boinc_task_state.xml
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc      1019 Jan 27 08:31 memory_monitor_summary.json
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc        95 Jan 27 08:31 pilot_heartbeat.json
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc   1516246 Jan 27 08:32 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc    648321 Jan 27 08:32 log.48329874._000026.job.log.tgz.1
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc      6308 Jan 27 08:32 heartbeat.json
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc      8192 Jan 27 08:32 boinc_mmap_file
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc        29 Jan 27 08:32 wrapper_checkpoint.txt
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc      4880 Jan 27 08:32 pilotlog.txt
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc   4022011 Jan 27 08:32 log.48329874._000026.job.log.1
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc       357 Jan 27 08:32 output.list
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc       620 Jan 27 08:32 runtime_log
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc   4689920 Jan 27 08:32 result.tar.gz
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc      8816 Jan 27 08:32 runtime_log.err
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc       658 Jan 27 08:32 gglKDmmBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmj11KDmy2oPjn.diag
[2026-01-27 08:32:53] -rw-r--r--. 1 boinc boinc     21296 Jan 27 08:32 stderr.txt
[2026-01-27 08:32:53] HITS file was successfully produced:
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc 205628911 Jan 27 08:30 shared/HITS.pool.root.1
[2026-01-27 08:32:53]  *** Contents of shared directory: ***
[2026-01-27 08:32:53] total 474752
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc 275208789 Jan 27 00:23 ATLAS.root_0
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:23 start_atlas.sh
[2026-01-27 08:32:53] -rw-r--r--. 2 boinc boinc    597763 Jan 27 00:23 input.tar.gz
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc 205628911 Jan 27 08:30 HITS.pool.root.1
[2026-01-27 08:32:53] -rw-------. 1 boinc boinc   4689920 Jan 27 08:32 result.tar.gz
08:32:55 (13429): run_atlas exited; CPU time 128135.793513
08:32:55 (13429): called boinc_finish(0)

</stderr_txt>
]]>

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