Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:02:40 (878439): wrapper (7.7.26015): starting
03:02:40 (878439): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 03:02:40] Arguments: --nthreads 4
[2026-01-27 03:02:40] Threads: 4
[2026-01-27 03:02:40] Checking for CVMFS
[2026-01-27 03:02:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 03:02:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 03:02:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 03:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 03:02:40] 2.9.2.0 3959587 5276 96896 155568 3 50 23016932 36864000 0 130560 0 3230076 99.989 190733 5447 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 03:02:40] CVMFS is ok
[2026-01-27 03:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 03:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 03:02:40] Further information can be found at the LHC@home message board.
[2026-01-27 03:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 03:02:40] Checking for apptainer binary...
[2026-01-27 03:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 03:02:40] Running /usr/bin/apptainer --version
[2026-01-27 03:02:40] apptainer version 1.4.1-1.1
[2026-01-27 03:02:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 03:02:41] thA369a
[2026-01-27 03:02:41] apptainer works
[2026-01-27 03:02:41] Set ATHENA_PROC_NUMBER=4
[2026-01-27 03:02:41] Set ATHENA_CORE_NUMBER=4
[2026-01-27 03:02:41] Starting ATLAS job with PandaID=6983771635
[2026-01-27 03:02:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:07:00]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:07:00] 2026-01-27 03:06:03,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:07:00] 2026-01-27 03:06:03,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:07:00] 2026-01-27 03:06:03,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:07:00] 2026-01-27 03:06:03,886 | INFO     | aborting loop
[2026-01-27 04:07:00] 2026-01-27 03:06:04,445 | INFO     | all job control threads have been joined
[2026-01-27 04:07:00] 2026-01-27 03:06:04,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:07:00] 2026-01-27 03:06:04,547 | INFO     | all payload control threads have been joined
[2026-01-27 04:07:00] 2026-01-27 03:06:04,860 | INFO     | all data control threads have been joined
[2026-01-27 04:07:00] 2026-01-27 03:06:04,891 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:04,891 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:04,891 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,112 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,450 | INFO     | [job] control thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:07:00] 2026-01-27 03:06:05,553 | INFO     | [payload] control thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,573 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,654 | INFO     | [job] validate thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,715 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,765 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,866 | INFO     | [data] control thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:05,872 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:06,098 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:06,500 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:09,467 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:14,481 | INFO     | job.realtimelogging is not enabled
[2026-01-27 04:07:00] 2026-01-27 03:06:15,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:07:00] 2026-01-27 03:06:54,684 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:07:00] 2026-01-27 03:06:55,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893591738176)>', '<ExcThread(monitor, started 139893074269952)>']
[2026-01-27 04:07:00] 2026-01-27 03:06:56,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:07:00] 2026-01-27 03:06:56,152 | INFO     | [monitor] control thread has ended
[2026-01-27 04:07:00] 2026-01-27 03:07:00,675 | INFO     | all workflow threads have been joined
[2026-01-27 04:07:00] 2026-01-27 03:07:00,676 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:07:00] 2026-01-27 03:07:00,676 | INFO     | traces error code: 0
[2026-01-27 04:07:00] 2026-01-27 03:07:00,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:07:00] 2026-01-27 03:07:00,728 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:07:00] 2026-01-27 03:07:00,731 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:07:00] 2026-01-27 03:07:00,733 [wrapper] pilotpid: 882530
[2026-01-27 04:07:00] 2026-01-27 03:07:00,735 [wrapper] Pilot exit status: 0
[2026-01-27 04:07:00] 2026-01-27 03:07:00,742 [wrapper] pandaids: 6983771635
[2026-01-27 04:07:00] 2026-01-27 03:07:00,760 [wrapper] cleanup supervisor_pilot  892010 882531
[2026-01-27 04:07:00] 2026-01-27 03:07:00,762 [wrapper] Test setup, not cleaning
[2026-01-27 04:07:00] 2026-01-27 03:07:00,765 [wrapper] apfmon messages muted
[2026-01-27 04:07:00] 2026-01-27 03:07:00,767 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:07:00] 2026-01-27 03:07:00,769 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:07:00]  *** Error codes and diagnostics ***
[2026-01-27 04:07:00]     "exeErrorCode": 0,
[2026-01-27 04:07:00]     "exeErrorDiag": "",
[2026-01-27 04:07:00]     "pilotErrorCode": 0,
[2026-01-27 04:07:00]     "pilotErrorDiag": "",
[2026-01-27 04:07:00]  *** Listing of results directory ***
[2026-01-27 04:07:00] total 677976
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 04:07:00] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc       100 Jan 27 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:07:00] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 03:02 run_atlas
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc       105 Jan 27 03:02 job.xml
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc 500453792 Jan 27 03:02 EVNT.48317869._000031.pool.root.1
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc    597752 Jan 27 03:02 input.tar.gz
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:02 start_atlas.sh
[2026-01-27 04:07:00] drwxrwx--x 2 boinc boinc      4096 Jan 27 03:02 shared
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:02 boinc_setup_complete
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      6443 Jan 27 03:02 init_data.xml
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:02 boinc_lockfile
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      2514 Jan 27 03:02 pandaJob.out
[2026-01-27 04:07:00] -rw------- 1 boinc boinc   1006441 Jan 27 03:02 agis_schedconf.cvmfs.json
[2026-01-27 04:07:00] -rw------- 1 boinc boinc   1516246 Jan 27 03:02 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:07:00] -rw------- 1 boinc boinc       424 Jan 27 03:02 workernode_map.json
[2026-01-27 04:07:00] drwx------ 5 boinc boinc      4096 Jan 27 03:02 pilot3
[2026-01-27 04:07:00] -rw------- 1 boinc boinc        95 Jan 27 04:05 pilot_heartbeat.json
[2026-01-27 04:07:00] -rw------- 1 boinc boinc 188155982 Jan 27 04:05 HITS.48317872._001558.pool.root.1
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc       530 Jan 27 04:05 boinc_task_state.xml
[2026-01-27 04:07:00] -rw------- 1 boinc boinc      1034 Jan 27 04:05 memory_monitor_summary.json
[2026-01-27 04:07:00] -rw------- 1 boinc boinc    289150 Jan 27 04:05 log.48317872._001558.job.log.tgz.1
[2026-01-27 04:07:00] -rw------- 1 boinc boinc      6298 Jan 27 04:06 heartbeat.json
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc        27 Jan 27 04:06 wrapper_checkpoint.txt
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      8192 Jan 27 04:06 boinc_mmap_file
[2026-01-27 04:07:00] -rw------- 1 boinc boinc      4624 Jan 27 04:07 pilotlog.txt
[2026-01-27 04:07:00] -rw------- 1 boinc boinc    568619 Jan 27 04:07 log.48317872._001558.job.log.1
[2026-01-27 04:07:00] -rw------- 1 boinc boinc       357 Jan 27 04:07 output.list
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc       620 Jan 27 04:07 runtime_log
[2026-01-27 04:07:00] -rw------- 1 boinc boinc    870400 Jan 27 04:07 result.tar.gz
[2026-01-27 04:07:00] -rw------- 1 boinc boinc       658 Jan 27 04:07 yZJNDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyh8KDmf7ChOm.diag
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      8901 Jan 27 04:07 runtime_log.err
[2026-01-27 04:07:00] -rw-r--r-- 1 boinc boinc      6845 Jan 27 04:07 stderr.txt
[2026-01-27 04:07:00] HITS file was successfully produced:
[2026-01-27 04:07:00] -rw------- 1 boinc boinc 188155982 Jan 27 04:05 shared/HITS.pool.root.1
[2026-01-27 04:07:00]  *** Contents of shared directory: ***
[2026-01-27 04:07:00] total 673936
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc 500453792 Jan 27 03:02 ATLAS.root_0
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc    597752 Jan 27 03:02 input.tar.gz
[2026-01-27 04:07:00] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:02 start_atlas.sh
[2026-01-27 04:07:00] -rw------- 1 boinc boinc 188155982 Jan 27 04:05 HITS.pool.root.1
[2026-01-27 04:07:00] -rw------- 1 boinc boinc    870400 Jan 27 04:07 result.tar.gz
04:07:01 (878439): run_atlas exited; CPU time 14298.212431
04:07:01 (878439): called boinc_finish(0)

</stderr_txt>
]]>

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