Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:03:14 (3339559): wrapper (7.7.26015): starting
00:03:14 (3339559): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 00:03:14] Arguments: --nthreads 4
[2026-01-27 00:03:14] Threads: 4
[2026-01-27 00:03:14] Checking for CVMFS
[2026-01-27 00:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:03:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:03:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:03:15] 2.13.1.0 2934336 661 67408 155564 1 188 6754360 10240001 1822 130560 0 948178 99.993 26511 459 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-27 00:03:15] CVMFS is ok
[2026-01-27 00:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:03:15] Checking for apptainer binary...
[2026-01-27 00:03:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:03:15] Running /usr/bin/apptainer --version
[2026-01-27 00:03:15] apptainer version 1.4.5
[2026-01-27 00:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:03:15] julianvlneu
[2026-01-27 00:03:15] apptainer works
[2026-01-27 00:03:15] Set ATHENA_PROC_NUMBER=4
[2026-01-27 00:03:15] Set ATHENA_CORE_NUMBER=4
[2026-01-27 00:03:15] Starting ATLAS job with PandaID=6984043214
[2026-01-27 00:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:05:48]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:05:48]  mtime=0
[2026-01-27 01:05:48]  protocol_id=None
[2026-01-27 01:05:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 01:05:48]  replicas=None
[2026-01-27 01:05:48]  scope=mc23_13p6TeV
[2026-01-27 01:05:48]  status=None
[2026-01-27 01:05:48]  status_code=0
[2026-01-27 01:05:48]  storage_token=
[2026-01-27 01:05:48]  surl=/var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6984043214/log.48317911._000563.job.log.tgz.1
[2026-01-27 01:05:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/cd/log.48317911._000563.job.log.tgz.1
[2026-01-27 01:05:48]  workdir=None
[2026-01-27 01:05:48] ]
[2026-01-27 01:05:48] 2026-01-27 00:05:02,335 | INFO     | transferring file log.48317911._000563.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6984043214/log.48317911._000563.job.log.tgz.1 to /var/li
[2026-01-27 01:05:48] 2026-01-27 00:05:02,335 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6984043214/log.48317911._000563.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-27 01:05:48] 2026-01-27 00:05:02,359 | INFO     | adding to output.list: log.48317911._000563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/cd/log.48317911._000563.job.log.tg
[2026-01-27 01:05:48] 2026-01-27 00:05:02,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 01:05:48] 2026-01-27 00:05:02,361 | INFO     | summary of transferred files:
[2026-01-27 01:05:48] 2026-01-27 00:05:02,361 | INFO     |  -- lfn=log.48317911._000563.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 01:05:48] 2026-01-27 00:05:02,361 | INFO     | stage-out finished correctly
[2026-01-27 01:05:48] 2026-01-27 00:05:03,135 | INFO     | monitor loop #283: job 0:6984043214 is in state 'finished'
[2026-01-27 01:05:48] 2026-01-27 00:05:03,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 01:05:48] 2026-01-27 00:05:03,677 | INFO     | time since job start (3686s) is within the limit (349056.0s)
[2026-01-27 01:05:48] 2026-01-27 00:05:04,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 01:05:48] 2026-01-27 00:05:05,639 | INFO     | monitor loop #284: job 0:6984043214 is in state 'finished'
[2026-01-27 01:05:48] 2026-01-27 00:05:05,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 01:05:48] 2026-01-27 00:05:05,683 | INFO     | time since job start (3688s) is within the limit (349056.0s)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,068 | INFO     | job 6984043214 has state=finished
[2026-01-27 01:05:48] 2026-01-27 00:05:06,068 | INFO     | preparing for final server update for job 6984043214 in state='finished'
[2026-01-27 01:05:48] 2026-01-27 00:05:06,068 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6984043214/jobReport.json
[2026-01-27 01:05:48] 2026-01-27 00:05:06,069 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/4/workernode_map.json
[2026-01-27 01:05:48] 2026-01-27 00:05:06,070 | INFO     | this job has now completed (state=finished)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,070 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,070 | INFO     | log transfer has been attempted: DONE
[2026-01-27 01:05:48] 2026-01-27 00:05:06,070 | INFO     | job 6984043214 has finished - writing final server update
[2026-01-27 01:05:48] 2026-01-27 00:05:06,070 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,071 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/4/PanDA_Pilot-6984043214/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,071 | INFO     | extracted standard info from prmon json
[2026-01-27 01:05:48] 2026-01-27 00:05:06,071 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:05:48] 2026-01-27 00:05:06,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:05:48] 2026-01-27 00:05:06,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:05:48] 2026-01-27 00:05:06,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:05:48] 2026-01-27 00:05:06,072 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:05:48] 2026-01-27 00:05:06,072 | INFO     | sum of square deviations: 46147842.0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,072 | INFO     | sum of deviations: 507253247.0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | mean x: 1769470534.0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | mean y: 2339009.547169811
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | intersect: -19447534157.70351
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | chi2: 0.0013160689374447443
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | current memory leak: 10.99 B/s (using 53 data points, chi2=0.00)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | could have reported an average CPU frequency of 4399 MHz (6 samples)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | ..............................
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . Timing measurements:
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . get job = 0 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . initial setup = 7 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . payload setup = 8 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . stage-in = 0 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . payload execution = 3660 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . stage-out = 0 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | . log creation = 0 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,073 | INFO     | ..............................
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | 
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | job summary report
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | --------------------------------------------------
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | PanDA job id: 6984043214
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | task id: 48317911
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | errors: (none)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | pilot state: finished 
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | transexitcode: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | exeerrorcode: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | exeerrordiag: 
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | exitcode: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | exitmsg: OK
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | cpuconsumptiontime: 13704 s
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | nevents: 400
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | neventsw: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | pid: 3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | pgrp: 3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | corecount: 4
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | event service: False
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | sizes: {0: 2284220, 10: 2284220, 3673: 2309882, 3674: 2318908, 3677: 2318964, 3678: 2319158}
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | --------------------------------------------------
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | 
[2026-01-27 01:05:48] 2026-01-27 00:05:06,097 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/4
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:05:48] 2026-01-27 00:05:06,124 | INFO     | job 6984043214 has completed (purged errors)
[2026-01-27 01:05:48] 2026-01-27 00:05:06,125 | INFO     | overall cleanup function is called
[2026-01-27 01:05:48] 2026-01-27 00:05:06,821 | INFO     | PID=3343675 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:05:48] 2026-01-27 00:05:06,821 | INFO     | .. there are 3 such processes running
[2026-01-27 01:05:48] 2026-01-27 00:05:07,132 | INFO     | --- collectZombieJob: --- 10, [3348230]
[2026-01-27 01:05:48] 2026-01-27 00:05:07,132 | INFO     | zombie collector waiting for pid 3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:07,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:05:48] 2026-01-27 00:05:07,132 | INFO     | collected zombie processes
[2026-01-27 01:05:48] 2026-01-27 00:05:07,132 | INFO     | will attempt to kill all subprocesses of pid=3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:07,260 | INFO     | process IDs to be killed: [3348230] (in reverse order)
[2026-01-27 01:05:48] 2026-01-27 00:05:07,331 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:05:48] 2026-01-27 00:05:07,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:05:48] 2026-01-27 00:05:07,335 | INFO     | did not find any defunct processes belonging to 3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:07,339 | INFO     | did not find any defunct processes belonging to 3348230
[2026-01-27 01:05:48] 2026-01-27 00:05:07,339 | INFO     | ready for new job
[2026-01-27 01:05:48] 2026-01-27 00:05:07,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:05:48] 2026-01-27 00:05:07,340 | INFO     | **************************************
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | **************************************
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | 
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | pilot is running in a VM
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | architecture information:
[2026-01-27 01:05:48] 2026-01-27 00:05:07,341 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:05:48] 2026-01-27 00:05:07,355 | INFO     | cat /etc/os-release:
[2026-01-27 01:05:48] NAME="CentOS Linux"
[2026-01-27 01:05:48] VERSION="7 (Core)"
[2026-01-27 01:05:48] ID="centos"
[2026-01-27 01:05:48] ID_LIKE="rhel fedora"
[2026-01-27 01:05:48] VERSION_ID="7"
[2026-01-27 01:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:05:48] ANSI_COLOR="0;31"
[2026-01-27 01:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:05:48] HOME_URL="https://www.centos.org/"
[2026-01-27 01:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:05:48] 
[2026-01-27 01:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:05:48] 
[2026-01-27 01:05:48] 2026-01-27 00:05:07,355 | INFO     | **************************************
[2026-01-27 01:05:48] 2026-01-27 00:05:07,859 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/4
[2026-01-27 01:05:48] 2026-01-27 00:05:07,876 | INFO     | sufficient remaining disk space (140243894272 B)
[2026-01-27 01:05:48] 2026-01-27 00:05:07,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:05:48] 2026-01-27 00:05:07,877 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:05:48] 2026-01-27 00:05:07,877 | INFO     | update_server=False
[2026-01-27 01:05:48] 2026-01-27 00:05:07,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:05:48] 2026-01-27 00:05:07,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:05:48] 2026-01-27 00:05:07,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:05:48] 2026-01-27 00:05:07,967 | INFO     | all payload control threads have been joined
[2026-01-27 01:05:48] 2026-01-27 00:05:08,143 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 01:05:48] 2026-01-27 00:05:08,143 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 01:05:48] 2026-01-27 00:05:08,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:05:48] 2026-01-27 00:05:08,143 | INFO     | will abort loop
[2026-01-27 01:05:48] 2026-01-27 00:05:08,526 | INFO     | all job control threads have been joined
[2026-01-27 01:05:48] 2026-01-27 00:05:08,647 | INFO     | all data control threads have been joined
[2026-01-27 01:05:48] 2026-01-27 00:05:08,882 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:08,883 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:08,969 | INFO     | [payload] control thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,149 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,302 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,532 | INFO     | [job] control thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,648 | INFO     | [data] control thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,678 | INFO     | [job] validate thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,724 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,757 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,828 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,868 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,870 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:09,906 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:10,263 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:10,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:05:48] 2026-01-27 00:05:14,802 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:05:48] 2026-01-27 00:05:39,044 | INFO     | PID=3343675 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 01:05:48] 2026-01-27 00:05:39,044 | INFO     | .. there are 3 such processes running
[2026-01-27 01:05:48] 2026-01-27 00:05:39,045 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:05:48] 2026-01-27 00:05:39,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:05:48] 2026-01-27 00:05:39,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:05:48] 2026-01-27 00:05:42,271 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:05:48] 2026-01-27 00:05:43,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123813065377600)>', '<ExcThread(monitor, started 123812263737088)>']
[2026-01-27 01:05:48] 2026-01-27 00:05:44,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:05:48] 2026-01-27 00:05:44,072 | INFO     | [monitor] control thread has ended
[2026-01-27 01:05:48] 2026-01-27 00:05:48,303 | INFO     | all workflow threads have been joined
[2026-01-27 01:05:48] 2026-01-27 00:05:48,303 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:05:48] 2026-01-27 00:05:48,303 | INFO     | traces error code: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:48,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:05:48] 2026-01-27 00:05:48,386 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:05:48] 2026-01-27 00:05:48,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:05:48] 2026-01-27 00:05:48,398 [wrapper] pilotpid: 3343675
[2026-01-27 01:05:48] 2026-01-27 00:05:48,403 [wrapper] Pilot exit status: 0
[2026-01-27 01:05:48] 2026-01-27 00:05:48,423 [wrapper] pandaids: 6984043214
[2026-01-27 01:05:48] 2026-01-27 00:05:48,486 [wrapper] cleanup supervisor_pilot 3378111 3343676
[2026-01-27 01:05:48] 2026-01-27 00:05:48,498 [wrapper] Test setup, not cleaning
[2026-01-27 01:05:48] 2026-01-27 00:05:48,504 [wrapper] apfmon messages muted
[2026-01-27 01:05:48] 2026-01-27 00:05:48,509 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:05:48] 2026-01-27 00:05:48,515 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:05:48]  *** Error codes and diagnostics ***
[2026-01-27 01:05:48]     "exeErrorCode": 0,
[2026-01-27 01:05:48]     "exeErrorDiag": "",
[2026-01-27 01:05:48]     "pilotErrorCode": 0,
[2026-01-27 01:05:48]     "pilotErrorDiag": "",
[2026-01-27 01:05:48]  *** Listing of results directory ***
[2026-01-27 01:05:48] insgesamt 724900
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 01:05:48] -rwx------ 1 yeti boinc     36322 Jan 26 06:14 runpilot2-wrapper.sh
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc      5111 Jan 26 06:15 queuedata.json
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc       100 Jan 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:05:48] -rwxr-xr-x 1 yeti boinc      7986 Jan 27 00:03 run_atlas
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc       105 Jan 27 00:03 job.xml
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc 533697414 Jan 27 00:03 EVNT.48317909._000014.pool.root.1
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 01:05:48] drwxrwx--x 2 yeti boinc      4096 Jan 27 00:03 shared
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc    597758 Jan 27 00:03 input.tar.gz
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc      6731 Jan 27 00:03 init_data.xml
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc         0 Jan 27 00:03 boinc_setup_complete
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc         0 Jan 27 00:03 boinc_lockfile
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc      2498 Jan 27 00:03 pandaJob.out
[2026-01-27 01:05:48] -rw------- 1 yeti boinc        52 Jan 27 00:03 setup.sh.local
[2026-01-27 01:05:48] -rw------- 1 yeti boinc   1006433 Jan 27 00:03 agis_schedconf.cvmfs.json
[2026-01-27 01:05:48] -rw------- 1 yeti boinc   1516246 Jan 27 00:03 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:05:48] -rw------- 1 yeti boinc       425 Jan 27 00:03 workernode_map.json
[2026-01-27 01:05:48] drwx------ 5 yeti boinc      4096 Jan 27 00:03 pilot3
[2026-01-27 01:05:48] -rw------- 1 yeti boinc 202945870 Jan 27 01:04 HITS.48317911._000563.pool.root.1
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc       530 Jan 27 01:04 boinc_task_state.xml
[2026-01-27 01:05:48] -rw------- 1 yeti boinc      1013 Jan 27 01:04 memory_monitor_summary.json
[2026-01-27 01:05:48] -rw------- 1 yeti boinc    286705 Jan 27 01:05 log.48317911._000563.job.log.tgz.1
[2026-01-27 01:05:48] -rw------- 1 yeti boinc      6273 Jan 27 01:05 heartbeat.json
[2026-01-27 01:05:48] -rw------- 1 yeti boinc        95 Jan 27 01:05 pilot_heartbeat.json
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc      8192 Jan 27 01:05 boinc_mmap_file
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc        27 Jan 27 01:05 wrapper_checkpoint.txt
[2026-01-27 01:05:48] -rw------- 1 yeti boinc      5082 Jan 27 01:05 pilotlog.txt
[2026-01-27 01:05:48] -rw------- 1 yeti boinc    568438 Jan 27 01:05 log.48317911._000563.job.log.1
[2026-01-27 01:05:48] -rw------- 1 yeti boinc       357 Jan 27 01:05 output.list
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc       620 Jan 27 01:05 runtime_log
[2026-01-27 01:05:48] -rw------- 1 yeti boinc    870400 Jan 27 01:05 result.tar.gz
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc      9556 Jan 27 01:05 runtime_log.err
[2026-01-27 01:05:48] -rw------- 1 yeti boinc       640 Jan 27 01:05 ADJODm96T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJ78KDmlt2oMo.diag
[2026-01-27 01:05:48] -rw-r--r-- 1 yeti boinc     21519 Jan 27 01:05 stderr.txt
[2026-01-27 01:05:48] HITS file was successfully produced:
[2026-01-27 01:05:48] -rw------- 1 yeti boinc 202945870 Jan 27 01:04 shared/HITS.pool.root.1
[2026-01-27 01:05:48]  *** Contents of shared directory: ***
[2026-01-27 01:05:48] insgesamt 720844
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc 533697414 Jan 27 00:03 ATLAS.root_0
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc     15845 Jan 27 00:03 start_atlas.sh
[2026-01-27 01:05:48] -rw-r--r-- 2 yeti boinc    597758 Jan 27 00:03 input.tar.gz
[2026-01-27 01:05:48] -rw------- 1 yeti boinc 202945870 Jan 27 01:04 HITS.pool.root.1
[2026-01-27 01:05:48] -rw------- 1 yeti boinc    870400 Jan 27 01:05 result.tar.gz
01:05:50 (3339559): run_atlas exited; CPU time 13806.553355
01:05:50 (3339559): called boinc_finish(0)

</stderr_txt>
]]>

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