Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:07:57 (1180903): wrapper (7.7.26015): starting
11:07:57 (1180903): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 11:07:57] Arguments: --nthreads 8
[2026-01-26 11:07:57] Threads: 8
[2026-01-26 11:07:57] Checking for CVMFS
[2026-01-26 11:07:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 11:07:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 11:07:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 11:07:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 11:07:59] 2.13.3.0 14106 118060 245456 155551 2 821 39023833 40960001 40770 16776704 0 1314540902 99.724 965905744 48673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 11:07:59] CVMFS is ok
[2026-01-26 11:07:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 11:07:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 11:07:59] Further information can be found at the LHC@home message board.
[2026-01-26 11:07:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 11:07:59] Checking for apptainer binary...
[2026-01-26 11:07:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 11:07:59] Running /usr/bin/apptainer --version
[2026-01-26 11:07:59] apptainer version 1.4.5-2.el9
[2026-01-26 11:07:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 11:08:00] c8-7-5.aglt2.org
[2026-01-26 11:08:00] apptainer works
[2026-01-26 11:08:00] Set ATHENA_PROC_NUMBER=8
[2026-01-26 11:08:00] Set ATHENA_CORE_NUMBER=8
[2026-01-26 11:08:00] Starting ATLAS job with PandaID=6982979001
[2026-01-26 11:08:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:28:41]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:28:41]  guid=baf73182-ed62-4ee8-bb34-85c6c1f6ff0f
[2026-01-26 12:28:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 12:28:41]  is_altstaged=None
[2026-01-26 12:28:41]  is_tar=False
[2026-01-26 12:28:41]  lfn=log.48310724._008748.job.log.tgz.1
[2026-01-26 12:28:41]  mtime=0
[2026-01-26 12:28:41]  protocol_id=None
[2026-01-26 12:28:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 12:28:41]  replicas=None
[2026-01-26 12:28:41]  scope=mc23_13p6TeV
[2026-01-26 12:28:41]  status=None
[2026-01-26 12:28:41]  status_code=0
[2026-01-26 12:28:41]  storage_token=
[2026-01-26 12:28:41]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6982979001/log.48310724._008748.job.log.tgz.1
[2026-01-26 12:28:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/07/log.48310724._008748.job.log.tgz.1
[2026-01-26 12:28:41]  workdir=None
[2026-01-26 12:28:41] ]
[2026-01-26 12:28:41] 2026-01-26 17:27:27,797 | INFO     | transferring file log.48310724._008748.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6982979001/log.48310724._008748.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 12:28:41] 2026-01-26 17:27:27,798 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6982979001/log.48310724._008748.job.log.tgz.1 /tmp/boinchome/slots/3/log.48310724._008748.job
[2026-01-26 12:28:41] 2026-01-26 17:27:27,849 | INFO     | adding to output.list: log.48310724._008748.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/07/log.48310724._008748.job.log.tg
[2026-01-26 12:28:41] 2026-01-26 17:27:27,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 12:28:41] 2026-01-26 17:27:27,849 | INFO     | summary of transferred files:
[2026-01-26 12:28:41] 2026-01-26 17:27:27,849 | INFO     |  -- lfn=log.48310724._008748.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 12:28:41] 2026-01-26 17:27:27,850 | INFO     | stage-out finished correctly
[2026-01-26 12:28:41] 2026-01-26 17:27:27,945 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 12:28:41] 2026-01-26 17:27:28,202 | INFO     | monitor loop #305: job 0:6982979001 is in state 'finished'
[2026-01-26 12:28:41] 2026-01-26 17:27:28,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,708 | INFO     | time since job start (4684s) is within the limit (349056.0s)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,713 | INFO     | job 6982979001 has state=finished
[2026-01-26 12:28:41] 2026-01-26 17:27:29,713 | INFO     | preparing for final server update for job 6982979001 in state='finished'
[2026-01-26 12:28:41] 2026-01-26 17:27:29,713 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6982979001/jobReport.json
[2026-01-26 12:28:41] 2026-01-26 17:27:29,714 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-01-26 12:28:41] 2026-01-26 17:27:29,715 | INFO     | this job has now completed (state=finished)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,715 | INFO     | log transfer has been attempted: DONE
[2026-01-26 12:28:41] 2026-01-26 17:27:29,715 | INFO     | job 6982979001 has finished - writing final server update
[2026-01-26 12:28:41] 2026-01-26 17:27:29,715 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,755 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6982979001/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,756 | INFO     | extracted standard info from prmon json
[2026-01-26 12:28:41] 2026-01-26 17:27:29,756 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:28:41] 2026-01-26 17:27:29,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:28:41] 2026-01-26 17:27:29,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:28:41] 2026-01-26 17:27:29,756 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | sum of square deviations: 101843528.86956538
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | sum of deviations: -2452951436.782608
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | mean x: 1769446209.0434783
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | mean y: 2545431.5942028984
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | intersect: 42620526848.37718
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | chi2: 0.024647019846726514
[2026-01-26 12:28:41] 2026-01-26 17:27:29,757 | INFO     | current memory leak: -24.09 B/s (using 69 data points, chi2=0.02)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | ..............................
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . Timing measurements:
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . get job = 0 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . initial setup = 32 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . payload setup = 35 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . stage-in = 0 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . payload execution = 4637 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . stage-out = 3 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | . log creation = 0 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,763 | INFO     | ..............................
[2026-01-26 12:28:41] 2026-01-26 17:27:29,878 | INFO     | 
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | job summary report
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | --------------------------------------------------
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | PanDA job id: 6982979001
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | task id: 48310724
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | errors: (none)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | pilot state: finished 
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | transexitcode: 0
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | exeerrorcode: 0
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | exeerrordiag: 
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | exitcode: 0
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | exitmsg: OK
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | cpuconsumptiontime: 22561 s
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | nevents: 400
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | neventsw: 0
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | pid: 1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | pgrp: 1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | corecount: 8
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | event service: False
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | sizes: {0: 2283820, 1: 2284281, 4677: 2310385, 4681: 2319439, 4683: 2319577}
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | --------------------------------------------------
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | 
[2026-01-26 12:28:41] 2026-01-26 17:27:29,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-26 12:28:41] 2026-01-26 17:27:29,921 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | job 6982979001 has completed (purged errors)
[2026-01-26 12:28:41] 2026-01-26 17:27:29,922 | INFO     | overall cleanup function is called
[2026-01-26 12:28:41] 2026-01-26 17:27:30,934 | INFO     | --- collectZombieJob: --- 10, [1207547]
[2026-01-26 12:28:41] 2026-01-26 17:27:30,934 | INFO     | zombie collector waiting for pid 1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:30,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:28:41] 2026-01-26 17:27:30,934 | INFO     | collected zombie processes
[2026-01-26 12:28:41] 2026-01-26 17:27:30,934 | INFO     | will attempt to kill all subprocesses of pid=1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:31,915 | INFO     | process IDs to be killed: [1207547] (in reverse order)
[2026-01-26 12:28:41] 2026-01-26 17:27:32,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:28:41] 2026-01-26 17:27:32,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:28:41] 2026-01-26 17:27:32,201 | INFO     | did not find any defunct processes belonging to 1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:32,257 | INFO     | did not find any defunct processes belonging to 1207547
[2026-01-26 12:28:41] 2026-01-26 17:27:32,257 | INFO     | ready for new job
[2026-01-26 12:28:41] 2026-01-26 17:27:32,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:28:41] 2026-01-26 17:27:32,258 | INFO     | **************************************
[2026-01-26 12:28:41] 2026-01-26 17:27:32,258 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:28:41] 2026-01-26 17:27:32,258 | INFO     | **************************************
[2026-01-26 12:28:41] 2026-01-26 17:27:32,258 | INFO     | 
[2026-01-26 12:28:41] 2026-01-26 17:27:32,306 | INFO     | architecture information:
[2026-01-26 12:28:41] 2026-01-26 17:27:32,311 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:28:41] 2026-01-26 17:27:32,380 | INFO     | cat /etc/os-release:
[2026-01-26 12:28:41] NAME="CentOS Linux"
[2026-01-26 12:28:41] VERSION="7 (Core)"
[2026-01-26 12:28:41] ID="centos"
[2026-01-26 12:28:41] ID_LIKE="rhel fedora"
[2026-01-26 12:28:41] VERSION_ID="7"
[2026-01-26 12:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:28:41] ANSI_COLOR="0;31"
[2026-01-26 12:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:28:41] HOME_URL="https://www.centos.org/"
[2026-01-26 12:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:28:41] 
[2026-01-26 12:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:28:41] 
[2026-01-26 12:28:41] 2026-01-26 17:27:32,380 | INFO     | **************************************
[2026-01-26 12:28:41] 2026-01-26 17:27:32,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 12:28:41] 2026-01-26 17:27:32,974 | INFO     | sufficient remaining disk space (167650525184 B)
[2026-01-26 12:28:41] 2026-01-26 17:27:32,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:28:41] 2026-01-26 17:27:32,974 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:28:41] 2026-01-26 17:27:32,974 | INFO     | update_server=False
[2026-01-26 12:28:41] 2026-01-26 17:27:32,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:28:41] 2026-01-26 17:27:33,219 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 12:28:41] 2026-01-26 17:27:33,220 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 12:28:41] 2026-01-26 17:27:33,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:28:41] 2026-01-26 17:27:33,220 | INFO     | will abort loop
[2026-01-26 12:28:41] 2026-01-26 17:27:33,341 | INFO     | all data control threads have been joined
[2026-01-26 12:28:41] 2026-01-26 17:27:33,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:28:41] 2026-01-26 17:27:33,834 | INFO     | all job control threads have been joined
[2026-01-26 12:28:41] 2026-01-26 17:27:33,847 | INFO     | all payload control threads have been joined
[2026-01-26 12:28:41] 2026-01-26 17:27:33,981 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:28:41] 2026-01-26 17:27:34,221 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,226 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,316 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,350 | INFO     | [data] control thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,723 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,847 | INFO     | [job] control thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,854 | INFO     | [payload] control thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,862 | INFO     | [job] validate thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:34,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:28:41] 2026-01-26 17:27:35,249 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:35,249 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:35,516 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:35,901 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:38,048 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:27:43,035 | INFO     | job.realtimelogging is not enabled
[2026-01-26 12:28:41] 2026-01-26 17:27:44,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:28:41] 2026-01-26 17:28:04,106 | INFO     | PID=1192515 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 12:28:41] 2026-01-26 17:28:04,106 | INFO     | .. there are 47 such processes running
[2026-01-26 12:28:41] 2026-01-26 17:28:04,106 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:28:41] 2026-01-26 17:28:04,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:28:41] 2026-01-26 17:28:04,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:28:41] 2026-01-26 17:28:32,765 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:28:41] 2026-01-26 17:28:34,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872115074880)>', '<ExcThread(monitor, started 139871742043904)>']
[2026-01-26 12:28:41] 2026-01-26 17:28:34,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:28:41] 2026-01-26 17:28:34,287 | INFO     | [monitor] control thread has ended
[2026-01-26 12:28:41] 2026-01-26 17:28:39,139 | INFO     | all workflow threads have been joined
[2026-01-26 12:28:41] 2026-01-26 17:28:39,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:28:41] 2026-01-26 17:28:39,139 | INFO     | traces error code: 0
[2026-01-26 12:28:41] 2026-01-26 17:28:39,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:28:41] 2026-01-26 17:28:40,133 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:28:41] 2026-01-26 17:28:40,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:28:41] 2026-01-26 17:28:40,198 [wrapper] pilotpid: 1192515
[2026-01-26 12:28:41] 2026-01-26 17:28:40,233 [wrapper] Pilot exit status: 0
[2026-01-26 12:28:41] 2026-01-26 17:28:40,463 [wrapper] pandaids: 6982979001
[2026-01-26 12:28:41] 2026-01-26 17:28:40,764 [wrapper] cleanup supervisor_pilot 2098797 1192516
[2026-01-26 12:28:41] 2026-01-26 17:28:40,789 [wrapper] Test setup, not cleaning
[2026-01-26 12:28:41] 2026-01-26 17:28:40,854 [wrapper] apfmon messages muted
[2026-01-26 12:28:41] 2026-01-26 17:28:40,880 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:28:41] 2026-01-26 17:28:40,925 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:28:41]  *** Error codes and diagnostics ***
[2026-01-26 12:28:41]     "exeErrorCode": 0,
[2026-01-26 12:28:41]     "exeErrorDiag": "",
[2026-01-26 12:28:41]     "pilotErrorCode": 0,
[2026-01-26 12:28:41]     "pilotErrorDiag": "",
[2026-01-26 12:28:41]  *** Listing of results directory ***
[2026-01-26 12:28:41] total 677680
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 06:28 queuedata.json
[2026-01-26 12:28:41] -rwx------. 1 boincer umatlas     36322 Jan 25 06:28 runpilot2-wrapper.sh
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 06:29 pilot3.tar.gz
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas       100 Jan 26 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:28:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 11:07 run_atlas
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas       105 Jan 26 11:07 job.xml
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas 501377062 Jan 26 11:07 EVNT.48310721._000175.pool.root.1
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:07 start_atlas.sh
[2026-01-26 12:28:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 11:07 shared
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 11:07 input.tar.gz
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas         0 Jan 26 11:07 boinc_lockfile
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas      2534 Jan 26 11:08 pandaJob.out
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas        57 Jan 26 11:08 setup.sh.local
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas   1002189 Jan 26 11:08 agis_schedconf.cvmfs.json
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas   1516246 Jan 26 11:08 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas       429 Jan 26 11:09 workernode_map.json
[2026-01-26 12:28:41] drwx------. 5 boincer umatlas      4096 Jan 26 11:09 pilot3
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas 186627537 Jan 26 12:26 HITS.48310724._008748.pool.root.1
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas       530 Jan 26 12:26 boinc_task_state.xml
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas      1033 Jan 26 12:27 memory_monitor_summary.json
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas    359269 Jan 26 12:27 log.48310724._008748.job.log.tgz.1
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas        95 Jan 26 12:27 pilot_heartbeat.json
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas      6325 Jan 26 12:27 heartbeat.json
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas      7172 Jan 26 12:28 init_data.xml
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas        27 Jan 26 12:28 wrapper_checkpoint.txt
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 12:28 boinc_mmap_file
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas      5079 Jan 26 12:28 pilotlog.txt
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas    640242 Jan 26 12:28 log.48310724._008748.job.log.1
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas       357 Jan 26 12:28 output.list
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas       620 Jan 26 12:28 runtime_log
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas   1013760 Jan 26 12:28 result.tar.gz
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas      9331 Jan 26 12:28 runtime_log.err
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas       650 Jan 26 12:28 hPGNDmNTD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzS7KDmNqMKtm.diag
[2026-01-26 12:28:41] -rw-r--r--. 1 boincer umatlas     21350 Jan 26 12:28 stderr.txt
[2026-01-26 12:28:41] HITS file was successfully produced:
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas 186627537 Jan 26 12:26 shared/HITS.pool.root.1
[2026-01-26 12:28:41]  *** Contents of shared directory: ***
[2026-01-26 12:28:41] total 673484
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas 501377062 Jan 26 11:07 ATLAS.root_0
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 11:07 start_atlas.sh
[2026-01-26 12:28:41] -rw-r--r--. 2 boincer umatlas    597766 Jan 26 11:07 input.tar.gz
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas 186627537 Jan 26 12:26 HITS.pool.root.1
[2026-01-26 12:28:41] -rw-------. 1 boincer umatlas   1013760 Jan 26 12:28 result.tar.gz
12:28:43 (1180903): run_atlas exited; CPU time 22707.515786
12:28:43 (1180903): called boinc_finish(0)

</stderr_txt>
]]>

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