Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:42:23 (62744): wrapper (7.7.26015): starting
01:42:23 (62744): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 01:42:23] Arguments: --nthreads 3
[2026-01-27 01:42:23] Threads: 3
[2026-01-27 01:42:23] Checking for CVMFS
[2026-01-27 01:42:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:42:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:42:25] 2.9.2.0 1590521 8138 88008 155567 2 50 25469309 36864001 0 130560 0 3642537 99.987 257051 4916 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 01:42:25] CVMFS is ok
[2026-01-27 01:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:42:25] Further information can be found at the LHC@home message board.
[2026-01-27 01:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:42:25] Checking for apptainer binary...
[2026-01-27 01:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:42:25] Running /usr/bin/apptainer --version
[2026-01-27 01:42:25] apptainer version 1.4.1-1.1
[2026-01-27 01:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:42:25] legendA163
[2026-01-27 01:42:25] apptainer works
[2026-01-27 01:42:25] Set ATHENA_PROC_NUMBER=3
[2026-01-27 01:42:25] Set ATHENA_CORE_NUMBER=3
[2026-01-27 01:42:25] Starting ATLAS job with PandaID=6983771109
[2026-01-27 01:42:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 03:06:08]  *** The last 200 lines of the pilot log: ***
[2026-01-27 03:06:08]  is_tar=False
[2026-01-27 03:06:08]  lfn=log.48318034._002229.job.log.tgz.1
[2026-01-27 03:06:08]  mtime=0
[2026-01-27 03:06:08]  protocol_id=None
[2026-01-27 03:06:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 03:06:08]  replicas=None
[2026-01-27 03:06:08]  scope=mc23_13p6TeV
[2026-01-27 03:06:08]  status=None
[2026-01-27 03:06:08]  status_code=0
[2026-01-27 03:06:08]  storage_token=
[2026-01-27 03:06:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983771109/log.48318034._002229.job.log.tgz.1
[2026-01-27 03:06:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/a5/log.48318034._002229.job.log.tgz.1
[2026-01-27 03:06:08]  workdir=None
[2026-01-27 03:06:08] ]
[2026-01-27 03:06:08] 2026-01-27 02:05:30,970 | INFO     | transferring file log.48318034._002229.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983771109/log.48318034._002229.job.log.tgz.1 to /local/data/boinc/
[2026-01-27 03:06:08] 2026-01-27 02:05:30,971 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983771109/log.48318034._002229.job.log.tgz.1 /local/data/boinc/slots/0/log.48318034._0022
[2026-01-27 03:06:08] 2026-01-27 02:05:30,984 | INFO     | adding to output.list: log.48318034._002229.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/a5/log.48318034._002229.job.log.tg
[2026-01-27 03:06:08] 2026-01-27 02:05:30,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 03:06:08] 2026-01-27 02:05:30,984 | INFO     | summary of transferred files:
[2026-01-27 03:06:08] 2026-01-27 02:05:30,984 | INFO     |  -- lfn=log.48318034._002229.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 03:06:08] 2026-01-27 02:05:30,984 | INFO     | stage-out finished correctly
[2026-01-27 03:06:08] 2026-01-27 02:05:31,024 | INFO     | monitor loop #384: job 0:6983771109 is in state 'finished'
[2026-01-27 03:06:08] 2026-01-27 02:05:31,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 03:06:08] 2026-01-27 02:05:31,533 | INFO     | time since job start (4975s) is within the limit (349056.0s)
[2026-01-27 03:06:08] 2026-01-27 02:05:33,528 | INFO     | monitor loop #385: job 0:6983771109 is in state 'finished'
[2026-01-27 03:06:08] 2026-01-27 02:05:33,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 03:06:08] 2026-01-27 02:05:33,539 | INFO     | time since job start (4977s) is within the limit (349056.0s)
[2026-01-27 03:06:08] 2026-01-27 02:05:33,932 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 03:06:08] 2026-01-27 02:05:34,615 | INFO     | PID=66792 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 03:06:08] 2026-01-27 02:05:35,616 | INFO     | time since job start (4979s) is within the limit (349056.0s)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,032 | INFO     | monitor loop #386: job 0:6983771109 is in state 'finished'
[2026-01-27 03:06:08] 2026-01-27 02:05:36,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,863 | INFO     | job 6983771109 has state=finished
[2026-01-27 03:06:08] 2026-01-27 02:05:36,863 | INFO     | preparing for final server update for job 6983771109 in state='finished'
[2026-01-27 03:06:08] 2026-01-27 02:05:36,864 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983771109/jobReport.json
[2026-01-27 03:06:08] 2026-01-27 02:05:36,865 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-27 03:06:08] 2026-01-27 02:05:36,865 | INFO     | this job has now completed (state=finished)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,866 | INFO     | log transfer has been attempted: DONE
[2026-01-27 03:06:08] 2026-01-27 02:05:36,866 | INFO     | job 6983771109 has finished - writing final server update
[2026-01-27 03:06:08] 2026-01-27 02:05:36,866 | INFO     | total number of processed events: 400 (read)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,867 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983771109/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,867 | INFO     | extracted standard info from prmon json
[2026-01-27 03:06:08] 2026-01-27 02:05:36,867 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 03:06:08] 2026-01-27 02:05:36,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 03:06:08] 2026-01-27 02:05:36,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 03:06:08] 2026-01-27 02:05:36,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 03:06:08] 2026-01-27 02:05:36,868 | INFO     | fitting pss+swap vs Time
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | sum of square deviations: 130793150.0
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | sum of deviations: -15691482986.0
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | mean x: 1769477135.0
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | mean y: 2494832.946666667
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | intersect: 212289761849.36554
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | chi2: 0.14617934006959424
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | current memory leak: -119.97 B/s (using 75 data points, chi2=0.15)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | could have reported an average CPU frequency of 3881 MHz (6 samples)
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | ..............................
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . Timing measurements:
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . get job = 0 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . initial setup = 3 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . payload setup = 3 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . stage-in = 0 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . payload execution = 4957 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . stage-out = 0 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | . log creation = 0 s
[2026-01-27 03:06:08] 2026-01-27 02:05:36,869 | INFO     | ..............................
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | 
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | job summary report
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | --------------------------------------------------
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | PanDA job id: 6983771109
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | task id: 48318034
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | errors: (none)
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | pilot state: finished 
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | transexitcode: 0
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | exeerrorcode: 0
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | exeerrordiag: 
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | exitcode: 0
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | exitmsg: OK
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | cpuconsumptiontime: 14225 s
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | nevents: 400
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | neventsw: 0
[2026-01-27 03:06:08] 2026-01-27 02:05:37,325 | INFO     | pid: 71239
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | pgrp: 71239
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | corecount: 3
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | event service: False
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | sizes: {0: 2283771, 1: 2284232, 11: 2284232, 4964: 2319662, 4967: 2319662, 4970: 2319856}
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | --------------------------------------------------
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | 
[2026-01-27 03:06:08] 2026-01-27 02:05:37,326 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | job 6983771109 has completed (purged errors)
[2026-01-27 03:06:08] 2026-01-27 02:05:37,341 | INFO     | overall cleanup function is called
[2026-01-27 03:06:08] 2026-01-27 02:05:38,345 | INFO     | --- collectZombieJob: --- 10, [71239]
[2026-01-27 03:06:08] 2026-01-27 02:05:38,345 | INFO     | zombie collector waiting for pid 71239
[2026-01-27 03:06:08] 2026-01-27 02:05:38,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 03:06:08] 2026-01-27 02:05:38,345 | INFO     | collected zombie processes
[2026-01-27 03:06:08] 2026-01-27 02:05:38,345 | INFO     | will attempt to kill all subprocesses of pid=71239
[2026-01-27 03:06:08] 2026-01-27 02:05:38,400 | INFO     | process IDs to be killed: [71239] (in reverse order)
[2026-01-27 03:06:08] 2026-01-27 02:05:38,430 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 03:06:08] 2026-01-27 02:05:38,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 03:06:08] 2026-01-27 02:05:38,432 | INFO     | did not find any defunct processes belonging to 71239
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | did not find any defunct processes belonging to 71239
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | ready for new job
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | **************************************
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 03:06:08] 2026-01-27 02:05:38,434 | INFO     | **************************************
[2026-01-27 03:06:08] 2026-01-27 02:05:38,435 | INFO     | 
[2026-01-27 03:06:08] 2026-01-27 02:05:38,435 | INFO     | architecture information:
[2026-01-27 03:06:08] 2026-01-27 02:05:38,435 | INFO     | executing command: cat /etc/os-release
[2026-01-27 03:06:08] 2026-01-27 02:05:38,444 | INFO     | cat /etc/os-release:
[2026-01-27 03:06:08] NAME="CentOS Linux"
[2026-01-27 03:06:08] VERSION="7 (Core)"
[2026-01-27 03:06:08] ID="centos"
[2026-01-27 03:06:08] ID_LIKE="rhel fedora"
[2026-01-27 03:06:08] VERSION_ID="7"
[2026-01-27 03:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 03:06:08] ANSI_COLOR="0;31"
[2026-01-27 03:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 03:06:08] HOME_URL="https://www.centos.org/"
[2026-01-27 03:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 03:06:08] 
[2026-01-27 03:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 03:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 03:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 03:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 03:06:08] 
[2026-01-27 03:06:08] 2026-01-27 02:05:38,444 | INFO     | **************************************
[2026-01-27 03:06:08] 2026-01-27 02:05:38,948 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 03:06:08] 2026-01-27 02:05:38,960 | INFO     | sufficient remaining disk space (377201098752 B)
[2026-01-27 03:06:08] 2026-01-27 02:05:38,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 03:06:08] 2026-01-27 02:05:38,960 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 03:06:08] 2026-01-27 02:05:38,960 | INFO     | update_server=False
[2026-01-27 03:06:08] 2026-01-27 02:05:38,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 03:06:08] 2026-01-27 02:05:39,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 03:06:08] 2026-01-27 02:05:39,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:06:08] 2026-01-27 02:05:39,536 | INFO     | aborting loop
[2026-01-27 03:06:08] 2026-01-27 02:05:39,904 | INFO     | all job control threads have been joined
[2026-01-27 03:06:08] 2026-01-27 02:05:39,906 | INFO     | all payload control threads have been joined
[2026-01-27 03:06:08] 2026-01-27 02:05:39,966 | INFO     | [job] retrieve thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:39,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 03:06:08] 2026-01-27 02:05:39,999 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,011 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,050 | INFO     | all data control threads have been joined
[2026-01-27 03:06:08] 2026-01-27 02:05:40,179 | INFO     | [data] copytool_in thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,542 | INFO     | [job] job monitor thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,655 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,831 | INFO     | [payload] failed_post thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,910 | INFO     | [job] control thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,912 | INFO     | [payload] control thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:40,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:41,034 | INFO     | [data] copytool_out thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:41,051 | INFO     | [data] control thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:41,336 | INFO     | [payload] validate_post thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:41,452 | INFO     | [job] validate thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:41,470 | INFO     | [monitor] cgroup control has ended
[2026-01-27 03:06:08] 2026-01-27 02:05:41,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:06:08] 2026-01-27 02:05:42,918 | INFO     | [job] queue monitor thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:43,975 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 03:06:08] 2026-01-27 02:05:44,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840343160640)>', '<ExcThread(monitor, started 139839991158528)>']
[2026-01-27 03:06:08] 2026-01-27 02:05:49,595 | INFO     | all workflow threads have been joined
[2026-01-27 03:06:08] 2026-01-27 02:05:49,595 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 03:06:08] 2026-01-27 02:05:49,595 | INFO     | traces error code: 0
[2026-01-27 03:06:08] 2026-01-27 02:05:49,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | INFO     | PID=66792 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 03:06:08] 2026-01-27 02:06:08,758 | INFO     | [monitor] control thread has ended
[2026-01-27 03:06:08] 2026-01-27 02:06:08,805 [wrapper] ==== pilot stdout END ====
[2026-01-27 03:06:08] 2026-01-27 02:06:08,807 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 03:06:08] 2026-01-27 02:06:08,809 [wrapper] pilotpid: 66792
[2026-01-27 03:06:08] 2026-01-27 02:06:08,812 [wrapper] Pilot exit status: 0
[2026-01-27 03:06:08] 2026-01-27 02:06:08,819 [wrapper] pandaids: 6983771109
[2026-01-27 03:06:08] 2026-01-27 02:06:08,839 [wrapper] cleanup supervisor_pilot   80940 66793
[2026-01-27 03:06:08] 2026-01-27 02:06:08,841 [wrapper] Test setup, not cleaning
[2026-01-27 03:06:08] 2026-01-27 02:06:08,844 [wrapper] apfmon messages muted
[2026-01-27 03:06:08] 2026-01-27 02:06:08,846 [wrapper] ==== wrapper stdout END ====
[2026-01-27 03:06:08] 2026-01-27 02:06:08,849 [wrapper] ==== wrapper stderr END ====
[2026-01-27 03:06:08]  *** Error codes and diagnostics ***
[2026-01-27 03:06:08]     "exeErrorCode": 0,
[2026-01-27 03:06:08]     "exeErrorDiag": "",
[2026-01-27 03:06:08]     "pilotErrorCode": 0,
[2026-01-27 03:06:08]     "pilotErrorDiag": "",
[2026-01-27 03:06:08]  *** Listing of results directory ***
[2026-01-27 03:06:08] total 663056
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 03:06:08] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 03:06:08] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:42 run_atlas
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:42 job.xml
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc 498513903 Jan 27 01:42 EVNT.48318032._000058.pool.root.1
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc    597768 Jan 27 01:42 input.tar.gz
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:42 start_atlas.sh
[2026-01-27 03:06:08] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:42 shared
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:42 boinc_setup_complete
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc      6449 Jan 27 01:42 init_data.xml
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:42 boinc_lockfile
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc      2533 Jan 27 01:42 pandaJob.out
[2026-01-27 03:06:08] -rw------- 1 boinc boinc   1006441 Jan 27 01:42 agis_schedconf.cvmfs.json
[2026-01-27 03:06:08] -rw------- 1 boinc boinc   1516246 Jan 27 01:42 agis_ddmendpoints.agis.ALL.json
[2026-01-27 03:06:08] -rw------- 1 boinc boinc       427 Jan 27 01:42 workernode_map.json
[2026-01-27 03:06:08] drwx------ 5 boinc boinc      4096 Jan 27 01:42 pilot3
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc       530 Jan 27 03:05 boinc_task_state.xml
[2026-01-27 03:06:08] -rw------- 1 boinc boinc 174519420 Jan 27 03:05 HITS.48318034._002229.pool.root.1
[2026-01-27 03:06:08] -rw------- 1 boinc boinc      1014 Jan 27 03:05 memory_monitor_summary.json
[2026-01-27 03:06:08] -rw------- 1 boinc boinc    272618 Jan 27 03:05 log.48318034._002229.job.log.tgz.1
[2026-01-27 03:06:08] -rw------- 1 boinc boinc      6311 Jan 27 03:05 heartbeat.json
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc      8192 Jan 27 03:05 boinc_mmap_file
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc        27 Jan 27 03:05 wrapper_checkpoint.txt
[2026-01-27 03:06:08] -rw------- 1 boinc boinc       745 Jan 27 03:06 pilotlog.txt
[2026-01-27 03:06:08] -rw------- 1 boinc boinc        95 Jan 27 03:06 pilot_heartbeat.json
[2026-01-27 03:06:08] -rw------- 1 boinc boinc    727628 Jan 27 03:06 log.48318034._002229.job.log.1
[2026-01-27 03:06:08] -rw------- 1 boinc boinc       357 Jan 27 03:06 output.list
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc       620 Jan 27 03:06 runtime_log
[2026-01-27 03:06:08] -rw------- 1 boinc boinc   1013760 Jan 27 03:06 result.tar.gz
[2026-01-27 03:06:08] -rw------- 1 boinc boinc       661 Jan 27 03:06 vdPMDmeKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3A2KDm6Le9Vn.diag
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc      8916 Jan 27 03:06 runtime_log.err
[2026-01-27 03:06:08] -rw-r--r-- 1 boinc boinc     21682 Jan 27 03:06 stderr.txt
[2026-01-27 03:06:08] HITS file was successfully produced:
[2026-01-27 03:06:08] -rw------- 1 boinc boinc 174519420 Jan 27 03:05 shared/HITS.pool.root.1
[2026-01-27 03:06:08]  *** Contents of shared directory: ***
[2026-01-27 03:06:08] total 658864
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc 498513903 Jan 27 01:42 ATLAS.root_0
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc    597768 Jan 27 01:42 input.tar.gz
[2026-01-27 03:06:08] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:42 start_atlas.sh
[2026-01-27 03:06:08] -rw------- 1 boinc boinc 174519420 Jan 27 03:05 HITS.pool.root.1
[2026-01-27 03:06:08] -rw------- 1 boinc boinc   1013760 Jan 27 03:06 result.tar.gz
03:06:09 (62744): run_atlas exited; CPU time 14254.771625
03:06:09 (62744): called boinc_finish(0)

</stderr_txt>
]]>

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