Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:31:01 (18691): wrapper (7.7.26015): starting
17:31:01 (18691): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 17:31:01] Arguments: --nthreads 8
[2026-01-26 17:31:01] Threads: 8
[2026-01-26 17:31:01] Checking for CVMFS
[2026-01-26 17:31:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 17:31:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 17:31:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 17:31:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 17:31:01] 2.11.0.0 8815 153743 95340 155553 3 10 3648657 4096001 44 130560 2 10404311 99.441 10822356 525 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-26 17:31:01] CVMFS is ok
[2026-01-26 17:31:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 17:31:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 17:31:01] Further information can be found at the LHC@home message board.
[2026-01-26 17:31:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 17:31:01] Checking for apptainer binary...
[2026-01-26 17:31:01] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-26 17:31:01] apptainer is not installed, using version from CVMFS
[2026-01-26 17:31:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 17:31:02] WARNING: Environment variable TMPDIR already has value [/tmp/job_11051194/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node246
[2026-01-26 17:31:02] apptainer works
[2026-01-26 17:31:02] Set ATHENA_PROC_NUMBER=8
[2026-01-26 17:31:02] Set ATHENA_CORE_NUMBER=8
[2026-01-26 17:31:02] Starting ATLAS job with PandaID=6983191338
[2026-01-26 17:31:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11051194/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:19:34]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:19:34]  filesize=288041
[2026-01-26 18:19:34]  filetype=log
[2026-01-26 18:19:34]  guid=fa8cd7a6-0e69-4b76-a55f-cdd2f07e7cc5
[2026-01-26 18:19:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 18:19:34]  is_altstaged=None
[2026-01-26 18:19:34]  is_tar=False
[2026-01-26 18:19:34]  lfn=log.47929408._002525.job.log.tgz.1
[2026-01-26 18:19:34]  mtime=0
[2026-01-26 18:19:34]  protocol_id=None
[2026-01-26 18:19:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 18:19:34]  replicas=None
[2026-01-26 18:19:34]  scope=mc23_13p6TeV
[2026-01-26 18:19:34]  status=None
[2026-01-26 18:19:34]  status_code=0
[2026-01-26 18:19:34]  storage_token=
[2026-01-26 18:19:34]  surl=/tmp/job_11051194/atlas/pilot/slots/0/PanDA_Pilot-6983191338/log.47929408._002525.job.log.tgz.1
[2026-01-26 18:19:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/0c/log.47929408._002525.job.log.tgz.1
[2026-01-26 18:19:34]  workdir=None
[2026-01-26 18:19:34] ]
[2026-01-26 18:19:34] 2026-01-26 17:18:58,320 | INFO     | transferring file log.47929408._002525.job.log.tgz.1 from /tmp/job_11051194/atlas/pilot/slots/0/PanDA_Pilot-6983191338/log.47929408._002525.job.log.tgz.1 to /tmp/j
[2026-01-26 18:19:34] 2026-01-26 17:18:58,320 | INFO     | executing command: /usr/bin/env mv /tmp/job_11051194/atlas/pilot/slots/0/PanDA_Pilot-6983191338/log.47929408._002525.job.log.tgz.1 /tmp/job_11051194/atlas/pilot/sl
[2026-01-26 18:19:34] 2026-01-26 17:18:58,327 | INFO     | adding to output.list: log.47929408._002525.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/0c/log.47929408._002525.job.log.tg
[2026-01-26 18:19:34] 2026-01-26 17:18:58,328 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 18:19:34] 2026-01-26 17:18:58,328 | INFO     | summary of transferred files:
[2026-01-26 18:19:34] 2026-01-26 17:18:58,328 | INFO     |  -- lfn=log.47929408._002525.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 18:19:34] 2026-01-26 17:18:58,328 | INFO     | stage-out finished correctly
[2026-01-26 18:19:34] 2026-01-26 17:18:58,947 | INFO     | time since job start (2870s) is within the limit (349056.0s)
[2026-01-26 18:19:34] 2026-01-26 17:18:59,822 | INFO     | monitor loop #218: job 0:6983191338 is in state 'finished'
[2026-01-26 18:19:34] 2026-01-26 17:18:59,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 18:19:34] 2026-01-26 17:19:00,952 | INFO     | time since job start (2872s) is within the limit (349056.0s)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,724 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 18:19:34] 2026-01-26 17:19:01,771 | INFO     | job 6983191338 has state=finished
[2026-01-26 18:19:34] 2026-01-26 17:19:01,771 | INFO     | preparing for final server update for job 6983191338 in state='finished'
[2026-01-26 18:19:34] 2026-01-26 17:19:01,771 | INFO     | reading metadata from: /tmp/job_11051194/atlas/pilot/slots/0/PanDA_Pilot-6983191338/jobReport.json
[2026-01-26 18:19:34] 2026-01-26 17:19:01,772 | INFO     | added worker_node to metadata from /tmp/job_11051194/atlas/pilot/slots/0/workernode_map.json
[2026-01-26 18:19:34] 2026-01-26 17:19:01,773 | INFO     | this job has now completed (state=finished)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,773 | INFO     | log transfer has been attempted: DONE
[2026-01-26 18:19:34] 2026-01-26 17:19:01,773 | INFO     | job 6983191338 has finished - writing final server update
[2026-01-26 18:19:34] 2026-01-26 17:19:01,773 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | INFO     | using path: /tmp/job_11051194/atlas/pilot/slots/0/PanDA_Pilot-6983191338/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | INFO     | extracted standard info from prmon json
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:19:34] 2026-01-26 17:19:01,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | sum of square deviations: 19832930.0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | sum of deviations: -1086187746.5
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | mean x: 1769446578.5
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | mean y: 2593419.875
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | intersect: 96909666235.29109
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | chi2: 0.019520027035642852
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | current memory leak: -54.77 B/s (using 40 data points, chi2=0.02)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | ..............................
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | . Timing measurements:
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | . get job = 0 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,791 | INFO     | . initial setup = 2 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | . payload setup = 2 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | . stage-in = 0 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | . payload execution = 2851 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | . stage-out = 0 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | . log creation = 0 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,792 | INFO     | ..............................
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | 
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | job summary report
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | --------------------------------------------------
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | PanDA job id: 6983191338
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | task id: 47929408
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | errors: (none)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | pilot state: finished 
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | transexitcode: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | exeerrorcode: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | exeerrordiag: 
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | exitcode: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | exitmsg: OK
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | cpuconsumptiontime: 20752 s
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | nevents: 400
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | neventsw: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | pid: 6376
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | pgrp: 6376
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | corecount: 8
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | event service: False
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | sizes: {0: 2284430, 11: 2284430, 2857: 2309891, 2859: 2318919, 2862: 2319201}
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | --------------------------------------------------
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | 
[2026-01-26 18:19:34] 2026-01-26 17:19:01,838 | INFO     | executing command: ls -lF /tmp/job_11051194/atlas/pilot/slots/0
[2026-01-26 18:19:34] 2026-01-26 17:19:01,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,847 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | job 6983191338 has completed (purged errors)
[2026-01-26 18:19:34] 2026-01-26 17:19:01,848 | INFO     | overall cleanup function is called
[2026-01-26 18:19:34] 2026-01-26 17:19:02,854 | INFO     | --- collectZombieJob: --- 10, [6376]
[2026-01-26 18:19:34] 2026-01-26 17:19:02,854 | INFO     | zombie collector waiting for pid 6376
[2026-01-26 18:19:34] 2026-01-26 17:19:02,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:19:34] 2026-01-26 17:19:02,854 | INFO     | collected zombie processes
[2026-01-26 18:19:34] 2026-01-26 17:19:02,854 | INFO     | will attempt to kill all subprocesses of pid=6376
[2026-01-26 18:19:34] 2026-01-26 17:19:02,952 | INFO     | process IDs to be killed: [6376] (in reverse order)
[2026-01-26 18:19:34] 2026-01-26 17:19:02,989 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:19:34] 2026-01-26 17:19:02,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:19:34] 2026-01-26 17:19:02,992 | INFO     | did not find any defunct processes belonging to 6376
[2026-01-26 18:19:34] 2026-01-26 17:19:02,995 | INFO     | did not find any defunct processes belonging to 6376
[2026-01-26 18:19:34] 2026-01-26 17:19:02,995 | INFO     | ready for new job
[2026-01-26 18:19:34] 2026-01-26 17:19:02,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:19:34] 2026-01-26 17:19:02,996 | INFO     | **************************************
[2026-01-26 18:19:34] 2026-01-26 17:19:02,996 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:19:34] 2026-01-26 17:19:02,996 | INFO     | **************************************
[2026-01-26 18:19:34] 2026-01-26 17:19:02,996 | INFO     | 
[2026-01-26 18:19:34] 2026-01-26 17:19:03,010 | INFO     | architecture information:
[2026-01-26 18:19:34] 2026-01-26 17:19:03,010 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:19:34] 2026-01-26 17:19:03,016 | INFO     | cat /etc/os-release:
[2026-01-26 18:19:34] NAME="CentOS Linux"
[2026-01-26 18:19:34] VERSION="7 (Core)"
[2026-01-26 18:19:34] ID="centos"
[2026-01-26 18:19:34] ID_LIKE="rhel fedora"
[2026-01-26 18:19:34] VERSION_ID="7"
[2026-01-26 18:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:19:34] ANSI_COLOR="0;31"
[2026-01-26 18:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:19:34] HOME_URL="https://www.centos.org/"
[2026-01-26 18:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:19:34] 
[2026-01-26 18:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:19:34] 
[2026-01-26 18:19:34] 2026-01-26 17:19:03,017 | INFO     | **************************************
[2026-01-26 18:19:34] 2026-01-26 17:19:03,519 | INFO     | executing command: df -mP /tmp/job_11051194/atlas/pilot/slots/0
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | INFO     | sufficient remaining disk space (220828008448 B)
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | INFO     | update_server=False
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:19:34] 2026-01-26 17:19:03,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:19:34] 2026-01-26 17:19:03,527 | INFO     | aborting loop
[2026-01-26 18:19:34] 2026-01-26 17:19:03,696 | INFO     | all job control threads have been joined
[2026-01-26 18:19:34] 2026-01-26 17:19:03,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:19:34] 2026-01-26 17:19:03,922 | INFO     | all data control threads have been joined
[2026-01-26 18:19:34] 2026-01-26 17:19:04,269 | INFO     | all payload control threads have been joined
[2026-01-26 18:19:34] 2026-01-26 17:19:04,531 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:04,532 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:04,532 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:04,701 | INFO     | [job] control thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:04,927 | INFO     | [data] control thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,032 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,274 | INFO     | [payload] control thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,358 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,557 | INFO     | [job] validate thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,583 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,601 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,803 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,844 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,891 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:05,968 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:07,532 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:19:34] 2026-01-26 17:19:12,586 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:19:34] 2026-01-26 17:19:12,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061081344)>']
[2026-01-26 18:19:34] 2026-01-26 17:19:17,881 | INFO     | all workflow threads have been joined
[2026-01-26 18:19:34] 2026-01-26 17:19:17,881 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:19:34] 2026-01-26 17:19:17,881 | INFO     | traces error code: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:17,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:19:34] 2026-01-26 17:19:34,136 | INFO     | PID=26172 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 18:19:34] 2026-01-26 17:19:34,136 | INFO     | .. there are 2 such processes running
[2026-01-26 18:19:34] 2026-01-26 17:19:34,136 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:19:34] 2026-01-26 17:19:34,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:19:34] 2026-01-26 17:19:34,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:19:34] 2026-01-26 17:19:34,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:19:34] 2026-01-26 17:19:34,137 | INFO     | [monitor] control thread has ended
[2026-01-26 18:19:34] 2026-01-26 17:19:34,189 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:19:34] 2026-01-26 17:19:34,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:19:34] 2026-01-26 17:19:34,192 [wrapper] pilotpid: 26172
[2026-01-26 18:19:34] 2026-01-26 17:19:34,193 [wrapper] Pilot exit status: 0
[2026-01-26 18:19:34] 2026-01-26 17:19:34,198 [wrapper] pandaids: 6983191338
[2026-01-26 18:19:34] 2026-01-26 17:19:34,218 [wrapper] cleanup supervisor_pilot 24048 26173
[2026-01-26 18:19:34] 2026-01-26 17:19:34,219 [wrapper] Test setup, not cleaning
[2026-01-26 18:19:34] 2026-01-26 17:19:34,221 [wrapper] apfmon messages muted
[2026-01-26 18:19:34] 2026-01-26 17:19:34,222 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:19:34] 2026-01-26 17:19:34,223 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:19:34]  *** Error codes and diagnostics ***
[2026-01-26 18:19:34]     "exeErrorCode": 0,
[2026-01-26 18:19:34]     "exeErrorDiag": "",
[2026-01-26 18:19:34]     "pilotErrorCode": 0,
[2026-01-26 18:19:34]     "pilotErrorDiag": "",
[2026-01-26 18:19:34]  *** Listing of results directory ***
[2026-01-26 18:19:34] total 437692
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-26 18:19:34] -rwx------ 1 mf493845 unix-user     36322 Jan 25 17:28 runpilot2-wrapper.sh
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      5111 Jan 25 17:28 queuedata.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       100 Jan 26 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:19:34] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 26 16:26 run_atlas
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       105 Jan 26 16:26 job.xml
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user 252976415 Jan 26 17:31 EVNT.47929406._000096.pool.root.1
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 26 17:31 start_atlas.sh
[2026-01-26 18:19:34] drwxrwx--x 2 mf493845 unix-user       100 Jan 26 17:31 shared
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user    597782 Jan 26 17:31 input.tar.gz
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      6391 Jan 26 17:31 init_data.xml
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user         0 Jan 26 17:31 boinc_setup_complete
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      8192 Jan 26 17:31 boinc_mmap_file
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user         0 Jan 26 17:31 boinc_lockfile
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      2575 Jan 26 17:31 pandaJob.out
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user   1006276 Jan 26 17:31 agis_schedconf.cvmfs.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user   1516246 Jan 26 17:31 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       420 Jan 26 17:31 workernode_map.json
[2026-01-26 18:19:34] drwx------ 5 mf493845 unix-user       440 Jan 26 17:31 pilot3
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user 189829116 Jan 26 18:18 HITS.47929408._002525.pool.root.1
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user        95 Jan 26 18:18 pilot_heartbeat.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      1013 Jan 26 18:18 memory_monitor_summary.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user    288041 Jan 26 18:18 log.47929408._002525.job.log.tgz.1
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      6312 Jan 26 18:19 heartbeat.json
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       820 Jan 26 18:19 pilotlog.txt
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user    456212 Jan 26 18:19 log.47929408._002525.job.log.1
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       357 Jan 26 18:19 output.list
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       620 Jan 26 18:19 runtime_log
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user    757760 Jan 26 18:19 result.tar.gz
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user      9219 Jan 26 18:19 runtime_log.err
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user       643 Jan 26 18:19 6OkKDma9H48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZq7KDm5iStIo.diag
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user     21685 Jan 26 18:19 stderr.txt
[2026-01-26 18:19:34] HITS file was successfully produced:
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user 189829116 Jan 26 18:18 shared/HITS.pool.root.1
[2026-01-26 18:19:34]  *** Contents of shared directory: ***
[2026-01-26 18:19:34] total 433768
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user 252976415 Jan 26 17:31 ATLAS.root_0
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 26 17:31 start_atlas.sh
[2026-01-26 18:19:34] -rw-r--r-- 2 mf493845 unix-user    597782 Jan 26 17:31 input.tar.gz
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user 189829116 Jan 26 18:18 HITS.pool.root.1
[2026-01-26 18:19:34] -rw------- 1 mf493845 unix-user    757760 Jan 26 18:19 result.tar.gz
18:19:35 (18691): run_atlas exited; CPU time 20790.852437
18:19:35 (18691): called boinc_finish(0)

</stderr_txt>
]]>

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