Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:25:42 (477970): wrapper (7.7.26015): starting
01:25:42 (477970): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 01:25:42] Arguments: --nthreads 3
[2026-01-27 01:25:42] Threads: 3
[2026-01-27 01:25:42] Checking for CVMFS
[2026-01-27 01:25:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:25:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:25:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:25:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:25:42] 2.9.2.0 3300999 9196 95476 155567 1 50 18951336 36864000 0 130560 0 4007305 99.986 300457 6823 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 01:25:42] CVMFS is ok
[2026-01-27 01:25:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:25:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:25:42] Further information can be found at the LHC@home message board.
[2026-01-27 01:25:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:25:42] Checking for apptainer binary...
[2026-01-27 01:25:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:25:42] Running /usr/bin/apptainer --version
[2026-01-27 01:25:42] apptainer version 1.4.1-1.1
[2026-01-27 01:25:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:25:42] atlasA214
[2026-01-27 01:25:42] apptainer works
[2026-01-27 01:25:42] Set ATHENA_PROC_NUMBER=3
[2026-01-27 01:25:42] Set ATHENA_CORE_NUMBER=3
[2026-01-27 01:25:42] Starting ATLAS job with PandaID=6983771542
[2026-01-27 01:25:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 02:50:04]  *** The last 200 lines of the pilot log: ***
[2026-01-27 02:50:04]  filetype=log
[2026-01-27 02:50:04]  guid=f577f11b-87d7-4c66-bd69-97a917f755f2
[2026-01-27 02:50:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 02:50:04]  is_altstaged=None
[2026-01-27 02:50:04]  is_tar=False
[2026-01-27 02:50:04]  lfn=log.48310783._002724.job.log.tgz.1
[2026-01-27 02:50:04]  mtime=0
[2026-01-27 02:50:04]  protocol_id=None
[2026-01-27 02:50:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 02:50:04]  replicas=None
[2026-01-27 02:50:04]  scope=mc23_13p6TeV
[2026-01-27 02:50:04]  status=None
[2026-01-27 02:50:04]  status_code=0
[2026-01-27 02:50:04]  storage_token=
[2026-01-27 02:50:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6983771542/log.48310783._002724.job.log.tgz.1
[2026-01-27 02:50:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/bc/log.48310783._002724.job.log.tgz.1
[2026-01-27 02:50:04]  workdir=None
[2026-01-27 02:50:04] ]
[2026-01-27 02:50:04] 2026-01-27 01:49:21,568 | INFO     | transferring file log.48310783._002724.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6983771542/log.48310783._002724.job.log.tgz.1 to /local/data/boinc/
[2026-01-27 02:50:04] 2026-01-27 01:49:21,568 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6983771542/log.48310783._002724.job.log.tgz.1 /local/data/boinc/slots/0/log.48310783._0027
[2026-01-27 02:50:04] 2026-01-27 01:49:21,581 | INFO     | adding to output.list: log.48310783._002724.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/bc/log.48310783._002724.job.log.tg
[2026-01-27 02:50:04] 2026-01-27 01:49:21,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 02:50:04] 2026-01-27 01:49:21,581 | INFO     | summary of transferred files:
[2026-01-27 02:50:04] 2026-01-27 01:49:21,581 | INFO     |  -- lfn=log.48310783._002724.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 02:50:04] 2026-01-27 01:49:21,581 | INFO     | stage-out finished correctly
[2026-01-27 02:50:04] 2026-01-27 01:49:21,610 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 02:50:04] 2026-01-27 01:49:22,554 | INFO     | time since job start (5011s) is within the limit (349056.0s)
[2026-01-27 02:50:04] 2026-01-27 01:49:23,187 | WARNING  | process 486430 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 02:50:04] 2026-01-27 01:49:23,187 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983771542/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:50:04] 2026-01-27 01:49:23,222 | INFO     | number of running child processes to parent process 486430: 1
[2026-01-27 02:50:04] 2026-01-27 01:49:23,222 | INFO     | maximum number of monitored processes: 6
[2026-01-27 02:50:04] 2026-01-27 01:49:24,334 | INFO     | job 6983771542 has state=finished
[2026-01-27 02:50:04] 2026-01-27 01:49:24,334 | INFO     | preparing for final server update for job 6983771542 in state='finished'
[2026-01-27 02:50:04] 2026-01-27 01:49:24,334 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6983771542/jobReport.json
[2026-01-27 02:50:04] 2026-01-27 01:49:24,335 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-27 02:50:04] 2026-01-27 01:49:24,336 | INFO     | this job has now completed (state=finished)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,336 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,336 | INFO     | log transfer has been attempted: DONE
[2026-01-27 02:50:04] 2026-01-27 01:49:24,336 | INFO     | job 6983771542 has finished - writing final server update
[2026-01-27 02:50:04] 2026-01-27 01:49:24,336 | INFO     | total number of processed events: 400 (read)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6983771542/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | INFO     | extracted standard info from prmon json
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 02:50:04] 2026-01-27 01:49:24,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 02:50:04] 2026-01-27 01:49:24,338 | INFO     | fitting pss+swap vs Time
[2026-01-27 02:50:04] 2026-01-27 01:49:24,338 | INFO     | sum of square deviations: 130793150.0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,338 | INFO     | sum of deviations: -11556553516.999998
[2026-01-27 02:50:04] 2026-01-27 01:49:24,338 | INFO     | mean x: 1769476130.0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,338 | INFO     | mean y: 2521977.3333333335
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | intersect: 156348978908.74792
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | chi2: 0.04595225368003038
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | current memory leak: -88.36 B/s (using 75 data points, chi2=0.05)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | could have reported an average CPU frequency of 3608 MHz (6 samples)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | ..............................
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . Timing measurements:
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . get job = 0 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . initial setup = 3 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . payload setup = 2 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . stage-in = 0 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . payload execution = 4992 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . stage-out = 0 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | . log creation = 0 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,339 | INFO     | ..............................
[2026-01-27 02:50:04] 2026-01-27 01:49:24,368 | INFO     | 
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | job summary report
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | --------------------------------------------------
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | PanDA job id: 6983771542
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | task id: 48310783
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | errors: (none)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | pilot state: finished 
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | transexitcode: 0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | exeerrorcode: 0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | exeerrordiag: 
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | exitcode: 0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | exitmsg: OK
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | cpuconsumptiontime: 14273 s
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | nevents: 400
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | neventsw: 0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | pid: 486430
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | pgrp: 486430
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | corecount: 3
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | event service: False
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | sizes: {0: 2283646, 1: 2284163, 11: 2284163, 4999: 2319597, 5002: 2319735}
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | --------------------------------------------------
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | 
[2026-01-27 02:50:04] 2026-01-27 01:49:24,369 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | job 6983771542 has completed (purged errors)
[2026-01-27 02:50:04] 2026-01-27 01:49:24,382 | INFO     | overall cleanup function is called
[2026-01-27 02:50:04] 2026-01-27 01:49:25,388 | INFO     | --- collectZombieJob: --- 10, [486430]
[2026-01-27 02:50:04] 2026-01-27 01:49:25,389 | INFO     | zombie collector waiting for pid 486430
[2026-01-27 02:50:04] 2026-01-27 01:49:25,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 02:50:04] 2026-01-27 01:49:25,389 | INFO     | collected zombie processes
[2026-01-27 02:50:04] 2026-01-27 01:49:25,389 | INFO     | will attempt to kill all subprocesses of pid=486430
[2026-01-27 02:50:04] 2026-01-27 01:49:25,429 | INFO     | process IDs to be killed: [486430] (in reverse order)
[2026-01-27 02:50:04] 2026-01-27 01:49:25,452 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 02:50:04] 2026-01-27 01:49:25,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 02:50:04] 2026-01-27 01:49:25,454 | INFO     | did not find any defunct processes belonging to 486430
[2026-01-27 02:50:04] 2026-01-27 01:49:25,455 | INFO     | did not find any defunct processes belonging to 486430
[2026-01-27 02:50:04] 2026-01-27 01:49:25,455 | INFO     | ready for new job
[2026-01-27 02:50:04] 2026-01-27 01:49:25,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 02:50:04] 2026-01-27 01:49:25,455 | INFO     | **************************************
[2026-01-27 02:50:04] 2026-01-27 01:49:25,456 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 02:50:04] 2026-01-27 01:49:25,456 | INFO     | **************************************
[2026-01-27 02:50:04] 2026-01-27 01:49:25,456 | INFO     | 
[2026-01-27 02:50:04] 2026-01-27 01:49:25,456 | INFO     | architecture information:
[2026-01-27 02:50:04] 2026-01-27 01:49:25,456 | INFO     | executing command: cat /etc/os-release
[2026-01-27 02:50:04] 2026-01-27 01:49:25,464 | INFO     | cat /etc/os-release:
[2026-01-27 02:50:04] NAME="CentOS Linux"
[2026-01-27 02:50:04] VERSION="7 (Core)"
[2026-01-27 02:50:04] ID="centos"
[2026-01-27 02:50:04] ID_LIKE="rhel fedora"
[2026-01-27 02:50:04] VERSION_ID="7"
[2026-01-27 02:50:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 02:50:04] ANSI_COLOR="0;31"
[2026-01-27 02:50:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 02:50:04] HOME_URL="https://www.centos.org/"
[2026-01-27 02:50:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 02:50:04] 
[2026-01-27 02:50:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 02:50:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 02:50:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 02:50:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 02:50:04] 
[2026-01-27 02:50:04] 2026-01-27 01:49:25,465 | INFO     | **************************************
[2026-01-27 02:50:04] 2026-01-27 01:49:25,968 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | INFO     | sufficient remaining disk space (237951254528 B)
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | INFO     | update_server=False
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 02:50:04] 2026-01-27 01:49:25,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:50:04] 2026-01-27 01:49:26,059 | INFO     | all data control threads have been joined
[2026-01-27 02:50:04] 2026-01-27 01:49:26,470 | INFO     | all payload control threads have been joined
[2026-01-27 02:50:04] 2026-01-27 01:49:26,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:50:04] 2026-01-27 01:49:26,731 | INFO     | aborting loop
[2026-01-27 02:50:04] 2026-01-27 01:49:26,986 | INFO     | [job] queue monitor thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:26,986 | INFO     | [job] retrieve thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,030 | INFO     | [data] copytool_in thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,065 | INFO     | [data] control thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,106 | INFO     | [payload] validate_post thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 02:50:04] 2026-01-27 01:49:27,322 | INFO     | all job control threads have been joined
[2026-01-27 02:50:04] 2026-01-27 01:49:27,475 | INFO     | [payload] control thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 02:50:04] 2026-01-27 01:49:27,737 | INFO     | [job] job monitor thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:27,978 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:28,173 | INFO     | [payload] failed_post thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:28,328 | INFO     | [job] control thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:28,334 | INFO     | [job] validate thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:28,414 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:28,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:29,127 | INFO     | [data] copytool_out thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:31,649 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:36,120 | INFO     | job.realtimelogging is not enabled
[2026-01-27 02:50:04] 2026-01-27 01:49:37,126 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 02:50:04] 2026-01-27 01:49:55,665 | INFO     | PID=482007 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 02:50:04] 2026-01-27 01:49:55,665 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 02:50:04] 2026-01-27 01:49:55,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 02:50:04] 2026-01-27 01:49:55,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 02:50:04] 2026-01-27 01:49:57,913 | INFO     | [monitor] cgroup control has ended
[2026-01-27 02:50:04] 2026-01-27 01:49:58,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676988340032)>', '<ExcThread(monitor, started 139676203599616)>']
[2026-01-27 02:50:04] 2026-01-27 01:49:59,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 02:50:04] 2026-01-27 01:49:59,687 | INFO     | [monitor] control thread has ended
[2026-01-27 02:50:04] 2026-01-27 01:50:03,968 | INFO     | all workflow threads have been joined
[2026-01-27 02:50:04] 2026-01-27 01:50:03,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 02:50:04] 2026-01-27 01:50:03,968 | INFO     | traces error code: 0
[2026-01-27 02:50:04] 2026-01-27 01:50:03,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 02:50:04] 2026-01-27 01:50:04,019 [wrapper] ==== pilot stdout END ====
[2026-01-27 02:50:04] 2026-01-27 01:50:04,022 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 02:50:04] 2026-01-27 01:50:04,024 [wrapper] pilotpid: 482007
[2026-01-27 02:50:04] 2026-01-27 01:50:04,026 [wrapper] Pilot exit status: 0
[2026-01-27 02:50:04] 2026-01-27 01:50:04,034 [wrapper] pandaids: 6983771542
[2026-01-27 02:50:04] 2026-01-27 01:50:04,049 [wrapper] cleanup supervisor_pilot  491466 482008
[2026-01-27 02:50:04] 2026-01-27 01:50:04,051 [wrapper] Test setup, not cleaning
[2026-01-27 02:50:04] 2026-01-27 01:50:04,053 [wrapper] apfmon messages muted
[2026-01-27 02:50:04] 2026-01-27 01:50:04,055 [wrapper] ==== wrapper stdout END ====
[2026-01-27 02:50:04] 2026-01-27 01:50:04,058 [wrapper] ==== wrapper stderr END ====
[2026-01-27 02:50:04]  *** Error codes and diagnostics ***
[2026-01-27 02:50:04]     "exeErrorCode": 0,
[2026-01-27 02:50:04]     "exeErrorDiag": "",
[2026-01-27 02:50:04]     "pilotErrorCode": 0,
[2026-01-27 02:50:04]     "pilotErrorDiag": "",
[2026-01-27 02:50:04]  *** Listing of results directory ***
[2026-01-27 02:50:04] total 717864
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 02:50:04] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 02:50:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:25 run_atlas
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:25 job.xml
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc 534929747 Jan 27 01:25 EVNT.48310779._000028.pool.root.1
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc    597758 Jan 27 01:25 input.tar.gz
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:25 start_atlas.sh
[2026-01-27 02:50:04] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:25 shared
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:25 boinc_setup_complete
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc      6443 Jan 27 01:25 init_data.xml
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:25 boinc_lockfile
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc      2522 Jan 27 01:25 pandaJob.out
[2026-01-27 02:50:04] -rw------- 1 boinc boinc   1006441 Jan 27 01:25 agis_schedconf.cvmfs.json
[2026-01-27 02:50:04] -rw------- 1 boinc boinc   1516246 Jan 27 01:25 agis_ddmendpoints.agis.ALL.json
[2026-01-27 02:50:04] -rw------- 1 boinc boinc       429 Jan 27 01:25 workernode_map.json
[2026-01-27 02:50:04] drwx------ 5 boinc boinc      4096 Jan 27 01:25 pilot3
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc       530 Jan 27 02:49 boinc_task_state.xml
[2026-01-27 02:50:04] -rw------- 1 boinc boinc 194181904 Jan 27 02:49 HITS.48310783._002724.pool.root.1
[2026-01-27 02:50:04] -rw------- 1 boinc boinc        95 Jan 27 02:49 pilot_heartbeat.json
[2026-01-27 02:50:04] -rw------- 1 boinc boinc      1019 Jan 27 02:49 memory_monitor_summary.json
[2026-01-27 02:50:04] -rw------- 1 boinc boinc    288214 Jan 27 02:49 log.48310783._002724.job.log.tgz.1
[2026-01-27 02:50:04] -rw------- 1 boinc boinc      6321 Jan 27 02:49 heartbeat.json
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc        27 Jan 27 02:50 wrapper_checkpoint.txt
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc      8192 Jan 27 02:50 boinc_mmap_file
[2026-01-27 02:50:04] -rw------- 1 boinc boinc      4819 Jan 27 02:50 pilotlog.txt
[2026-01-27 02:50:04] -rw------- 1 boinc boinc    732425 Jan 27 02:50 log.48310783._002724.job.log.1
[2026-01-27 02:50:04] -rw------- 1 boinc boinc       357 Jan 27 02:50 output.list
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc       620 Jan 27 02:50 runtime_log
[2026-01-27 02:50:04] -rw------- 1 boinc boinc   1034240 Jan 27 02:50 result.tar.gz
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc      8911 Jan 27 02:50 runtime_log.err
[2026-01-27 02:50:04] -rw------- 1 boinc boinc       660 Jan 27 02:50 jkRLDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgg8KDmJ2MUOn.diag
[2026-01-27 02:50:04] -rw-r--r-- 1 boinc boinc     21282 Jan 27 02:50 stderr.txt
[2026-01-27 02:50:04] HITS file was successfully produced:
[2026-01-27 02:50:04] -rw------- 1 boinc boinc 194181904 Jan 27 02:49 shared/HITS.pool.root.1
[2026-01-27 02:50:04]  *** Contents of shared directory: ***
[2026-01-27 02:50:04] total 713648
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc 534929747 Jan 27 01:25 ATLAS.root_0
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc    597758 Jan 27 01:25 input.tar.gz
[2026-01-27 02:50:04] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:25 start_atlas.sh
[2026-01-27 02:50:04] -rw------- 1 boinc boinc 194181904 Jan 27 02:49 HITS.pool.root.1
[2026-01-27 02:50:04] -rw------- 1 boinc boinc   1034240 Jan 27 02:50 result.tar.gz
02:50:05 (477970): run_atlas exited; CPU time 14295.173875
02:50:05 (477970): called boinc_finish(0)

</stderr_txt>
]]>

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