Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:04 (571995): wrapper (7.7.26015): starting
02:01:04 (571995): wrapper: running run_atlas (--nthreads 2)
[2026-01-27 02:01:04] Arguments: --nthreads 2
[2026-01-27 02:01:04] Threads: 2
[2026-01-27 02:01:04] Checking for CVMFS
[2026-01-27 02:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 02:01:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 02:01:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 02:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 02:01:05] 2.9.2.0 2882 5312 60692 155567 2 49 21357409 36864001 0 130560 0 1700421 99.978 199020 5178 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 02:01:05] CVMFS is ok
[2026-01-27 02:01:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 02:01:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 02:01:05] Further information can be found at the LHC@home message board.
[2026-01-27 02:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 02:01:05] Checking for apptainer binary...
[2026-01-27 02:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 02:01:05] Running /usr/bin/apptainer --version
[2026-01-27 02:01:05] apptainer version 1.4.1-1.1
[2026-01-27 02:01:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 02:01:05] madmaxA275
[2026-01-27 02:01:05] apptainer works
[2026-01-27 02:01:05] Set ATHENA_PROC_NUMBER=2
[2026-01-27 02:01:05] Set ATHENA_CORE_NUMBER=2
[2026-01-27 02:01:05] Starting ATLAS job with PandaID=6983771016
[2026-01-27 02:01:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 04:07:44]  *** The last 200 lines of the pilot log: ***
[2026-01-27 04:07:44] 2026-01-27 03:06:47,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 04:07:44] 2026-01-27 03:06:47,154 | INFO     | **************************************
[2026-01-27 04:07:44] 2026-01-27 03:06:47,155 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 04:07:44] 2026-01-27 03:06:47,155 | INFO     | **************************************
[2026-01-27 04:07:44] 2026-01-27 03:06:47,155 | INFO     | 
[2026-01-27 04:07:44] 2026-01-27 03:06:47,155 | INFO     | architecture information:
[2026-01-27 04:07:44] 2026-01-27 03:06:47,155 | INFO     | executing command: cat /etc/os-release
[2026-01-27 04:07:44] 2026-01-27 03:06:47,163 | INFO     | cat /etc/os-release:
[2026-01-27 04:07:44] NAME="CentOS Linux"
[2026-01-27 04:07:44] VERSION="7 (Core)"
[2026-01-27 04:07:44] ID="centos"
[2026-01-27 04:07:44] ID_LIKE="rhel fedora"
[2026-01-27 04:07:44] VERSION_ID="7"
[2026-01-27 04:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 04:07:44] ANSI_COLOR="0;31"
[2026-01-27 04:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 04:07:44] HOME_URL="https://www.centos.org/"
[2026-01-27 04:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 04:07:44] 
[2026-01-27 04:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 04:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 04:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 04:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 04:07:44] 
[2026-01-27 04:07:44] 2026-01-27 03:06:47,163 | INFO     | **************************************
[2026-01-27 04:07:44] 2026-01-27 03:06:47,667 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 04:07:44] 2026-01-27 03:06:47,678 | INFO     | sufficient remaining disk space (261068161024 B)
[2026-01-27 04:07:44] 2026-01-27 03:06:47,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 04:07:44] 2026-01-27 03:06:47,679 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 04:07:44] 2026-01-27 03:06:47,679 | INFO     | update_server=False
[2026-01-27 04:07:44] 2026-01-27 03:06:47,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 04:07:44] 2026-01-27 03:06:47,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:07:44] 2026-01-27 03:06:47,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 04:07:44] 2026-01-27 03:06:47,910 | INFO     | aborting loop
[2026-01-27 04:07:44] 2026-01-27 03:06:48,031 | INFO     | all data control threads have been joined
[2026-01-27 04:07:44] 2026-01-27 03:06:48,071 | INFO     | all job control threads have been joined
[2026-01-27 04:07:44] 2026-01-27 03:06:48,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 04:07:44] 2026-01-27 03:06:48,685 | INFO     | [job] retrieve thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:48,685 | INFO     | [job] queue monitor thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:48,698 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:48,740 | INFO     | all payload control threads have been joined
[2026-01-27 04:07:44] 2026-01-27 03:06:48,820 | INFO     | [payload] validate_post thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:48,846 | INFO     | [data] copytool_in thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:48,917 | INFO     | [job] job monitor thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,037 | INFO     | [data] control thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,077 | INFO     | [job] control thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 04:07:44] 2026-01-27 03:06:49,746 | INFO     | [payload] control thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,751 | INFO     | [payload] failed_post thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,794 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:49,840 | INFO     | [job] validate thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:50,072 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:50,108 | INFO     | [data] copytool_out thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:53,260 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:06:58,384 | INFO     | job.realtimelogging is not enabled
[2026-01-27 04:07:44] 2026-01-27 03:06:59,405 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 04:07:44] 2026-01-27 03:07:17,961 | INFO     | PID=576019 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 04:07:44] 2026-01-27 03:07:17,961 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 04:07:44] 2026-01-27 03:07:17,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 04:07:44] 2026-01-27 03:07:17,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 04:07:44] 2026-01-27 03:07:36,658 | INFO     | [monitor] cgroup control has ended
[2026-01-27 04:07:44] 2026-01-27 03:07:38,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343329437504)>', '<ExcThread(monitor, started 140342443616000)>']
[2026-01-27 04:07:44] 2026-01-27 03:07:39,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 04:07:44] 2026-01-27 03:07:39,071 | INFO     | [monitor] control thread has ended
[2026-01-27 04:07:44] 2026-01-27 03:07:43,523 | INFO     | all workflow threads have been joined
[2026-01-27 04:07:44] 2026-01-27 03:07:43,525 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 04:07:44] 2026-01-27 03:07:43,525 | INFO     | traces error code: 0
[2026-01-27 04:07:44] 2026-01-27 03:07:43,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 04:07:44] 2026-01-27 03:07:43,567 [wrapper] ==== pilot stdout END ====
[2026-01-27 04:07:44] 2026-01-27 03:07:43,570 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 04:07:44] 2026-01-27 03:07:43,572 [wrapper] pilotpid: 576019
[2026-01-27 04:07:44] 2026-01-27 03:07:43,574 [wrapper] Pilot exit status: 0
[2026-01-27 04:07:44] 2026-01-27 03:07:43,580 [wrapper] pandaids: 6983771016
[2026-01-27 04:07:44] 2026-01-27 03:07:43,591 [wrapper] cleanup supervisor_pilot  585522 576020
[2026-01-27 04:07:44] 2026-01-27 03:07:43,593 [wrapper] Test setup, not cleaning
[2026-01-27 04:07:44] 2026-01-27 03:07:43,595 [wrapper] apfmon messages muted
[2026-01-27 04:07:44] 2026-01-27 03:07:43,597 [wrapper] ==== wrapper stdout END ====
[2026-01-27 04:07:44] 2026-01-27 03:07:43,599 [wrapper] ==== wrapper stderr END ====
[2026-01-27 04:07:44]  *** Error codes and diagnostics ***
[2026-01-27 04:07:44]     "exeErrorCode": 0,
[2026-01-27 04:07:44]     "exeErrorDiag": "",
[2026-01-27 04:07:44]     "pilotErrorCode": 0,
[2026-01-27 04:07:44]     "pilotErrorDiag": "",
[2026-01-27 04:07:44]  *** Listing of results directory ***
[2026-01-27 04:07:44] total 669664
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 04:07:44] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc       100 Jan 27 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 04:07:44] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 02:01 run_atlas
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc       105 Jan 27 02:01 job.xml
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc 498460037 Jan 27 02:01 EVNT.48318032._000056.pool.root.1
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc    597764 Jan 27 02:01 input.tar.gz
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc     15845 Jan 27 02:01 start_atlas.sh
[2026-01-27 04:07:44] drwxrwx--x 2 boinc boinc      4096 Jan 27 02:01 shared
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc         0 Jan 27 02:01 boinc_setup_complete
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      6208 Jan 27 02:01 init_data.xml
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc         0 Jan 27 02:01 boinc_lockfile
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      2533 Jan 27 02:01 pandaJob.out
[2026-01-27 04:07:44] -rw------- 1 boinc boinc   1006441 Jan 27 02:01 agis_schedconf.cvmfs.json
[2026-01-27 04:07:44] -rw------- 1 boinc boinc   1516246 Jan 27 02:01 agis_ddmendpoints.agis.ALL.json
[2026-01-27 04:07:44] -rw------- 1 boinc boinc       422 Jan 27 02:01 workernode_map.json
[2026-01-27 04:07:44] drwx------ 5 boinc boinc      4096 Jan 27 02:01 pilot3
[2026-01-27 04:07:44] -rw------- 1 boinc boinc 180568322 Jan 27 04:06 HITS.48318034._002136.pool.root.1
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc       530 Jan 27 04:06 boinc_task_state.xml
[2026-01-27 04:07:44] -rw------- 1 boinc boinc      1014 Jan 27 04:06 memory_monitor_summary.json
[2026-01-27 04:07:44] -rw------- 1 boinc boinc    304553 Jan 27 04:06 log.48318034._002136.job.log.tgz.1
[2026-01-27 04:07:44] -rw------- 1 boinc boinc      6306 Jan 27 04:06 heartbeat.json
[2026-01-27 04:07:44] -rw------- 1 boinc boinc        95 Jan 27 04:07 pilot_heartbeat.json
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc        27 Jan 27 04:07 wrapper_checkpoint.txt
[2026-01-27 04:07:44] -rw------- 1 boinc boinc      4819 Jan 27 04:07 pilotlog.txt
[2026-01-27 04:07:44] -rw------- 1 boinc boinc   1081902 Jan 27 04:07 log.48318034._002136.job.log.1
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      8192 Jan 27 04:07 boinc_mmap_file
[2026-01-27 04:07:44] -rw------- 1 boinc boinc       357 Jan 27 04:07 output.list
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc       620 Jan 27 04:07 runtime_log
[2026-01-27 04:07:44] -rw------- 1 boinc boinc   1402880 Jan 27 04:07 result.tar.gz
[2026-01-27 04:07:44] -rw------- 1 boinc boinc       661 Jan 27 04:07 srPODmdKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn91KDmIdaERn.diag
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      8916 Jan 27 04:07 runtime_log.err
[2026-01-27 04:07:44] -rw-r--r-- 1 boinc boinc      9536 Jan 27 04:07 stderr.txt
[2026-01-27 04:07:44] HITS file was successfully produced:
[2026-01-27 04:07:44] -rw------- 1 boinc boinc 180568322 Jan 27 04:06 shared/HITS.pool.root.1
[2026-01-27 04:07:44]  *** Contents of shared directory: ***
[2026-01-27 04:07:44] total 665100
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc 498460037 Jan 27 02:01 ATLAS.root_0
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc    597764 Jan 27 02:01 input.tar.gz
[2026-01-27 04:07:44] -rw-r--r-- 2 boinc boinc     15845 Jan 27 02:01 start_atlas.sh
[2026-01-27 04:07:44] -rw------- 1 boinc boinc 180568322 Jan 27 04:06 HITS.pool.root.1
[2026-01-27 04:07:44] -rw------- 1 boinc boinc   1402880 Jan 27 04:07 result.tar.gz
04:08:05 (571995): run_atlas exited; CPU time 14633.280326
04:08:05 (571995): called boinc_finish(0)

</stderr_txt>
]]>

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