Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
18:09:03 (13006): wrapper (7.7.26015): starting
18:09:03 (13006): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 18:09:03] Arguments: --nthreads 8
[2026-01-26 18:09:03] Threads: 8
[2026-01-26 18:09:03] Checking for CVMFS
[2026-01-26 18:09:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 18:09:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 18:09:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 18:09:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 18:09:04] 2.11.0.0 7902 153779 101476 155554 0 188 3782754 4096001 1834 130560 3 7684460 99.282 10391660 496 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-26 18:09:04] CVMFS is ok
[2026-01-26 18:09:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 18:09:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 18:09:04] Further information can be found at the LHC@home message board.
[2026-01-26 18:09:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 18:09:04] Checking for apptainer binary...
[2026-01-26 18:09:04] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-26 18:09:04] apptainer is not installed, using version from CVMFS
[2026-01-26 18:09:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 18:09:04] WARNING: Environment variable TMPDIR already has value [/tmp/job_11051154/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node093
[2026-01-26 18:09:04] apptainer works
[2026-01-26 18:09:04] Set ATHENA_PROC_NUMBER=8
[2026-01-26 18:09:04] Set ATHENA_CORE_NUMBER=8
[2026-01-26 18:09:04] Starting ATLAS job with PandaID=6983328179
[2026-01-26 18:09:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11051154/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:56:22]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:56:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 18:56:22]  is_altstaged=None
[2026-01-26 18:56:22]  is_tar=False
[2026-01-26 18:56:22]  lfn=log.48318034._001155.job.log.tgz.1
[2026-01-26 18:56:22]  mtime=0
[2026-01-26 18:56:22]  protocol_id=None
[2026-01-26 18:56:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 18:56:22]  replicas=None
[2026-01-26 18:56:22]  scope=mc23_13p6TeV
[2026-01-26 18:56:22]  status=None
[2026-01-26 18:56:22]  status_code=0
[2026-01-26 18:56:22]  storage_token=
[2026-01-26 18:56:22]  surl=/tmp/job_11051154/atlas/pilot/slots/0/PanDA_Pilot-6983328179/log.48318034._001155.job.log.tgz.1
[2026-01-26 18:56:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/db/log.48318034._001155.job.log.tgz.1
[2026-01-26 18:56:22]  workdir=None
[2026-01-26 18:56:22] ]
[2026-01-26 18:56:22] 2026-01-26 17:55:35,521 | INFO     | transferring file log.48318034._001155.job.log.tgz.1 from /tmp/job_11051154/atlas/pilot/slots/0/PanDA_Pilot-6983328179/log.48318034._001155.job.log.tgz.1 to /tmp/j
[2026-01-26 18:56:22] 2026-01-26 17:55:35,521 | INFO     | executing command: /usr/bin/env mv /tmp/job_11051154/atlas/pilot/slots/0/PanDA_Pilot-6983328179/log.48318034._001155.job.log.tgz.1 /tmp/job_11051154/atlas/pilot/sl
[2026-01-26 18:56:22] 2026-01-26 17:55:35,527 | INFO     | adding to output.list: log.48318034._001155.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/db/log.48318034._001155.job.log.tg
[2026-01-26 18:56:22] 2026-01-26 17:55:35,528 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 18:56:22] 2026-01-26 17:55:35,528 | INFO     | summary of transferred files:
[2026-01-26 18:56:22] 2026-01-26 17:55:35,528 | INFO     |  -- lfn=log.48318034._001155.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 18:56:22] 2026-01-26 17:55:35,528 | INFO     | stage-out finished correctly
[2026-01-26 18:56:22] 2026-01-26 17:55:35,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 18:56:22] 2026-01-26 17:55:35,990 | INFO     | time since job start (2783s) is within the limit (349056.0s)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,951 | INFO     | job 6983328179 has state=finished
[2026-01-26 18:56:22] 2026-01-26 17:55:36,951 | INFO     | preparing for final server update for job 6983328179 in state='finished'
[2026-01-26 18:56:22] 2026-01-26 17:55:36,951 | INFO     | reading metadata from: /tmp/job_11051154/atlas/pilot/slots/0/PanDA_Pilot-6983328179/jobReport.json
[2026-01-26 18:56:22] 2026-01-26 17:55:36,952 | INFO     | added worker_node to metadata from /tmp/job_11051154/atlas/pilot/slots/0/workernode_map.json
[2026-01-26 18:56:22] 2026-01-26 17:55:36,953 | INFO     | this job has now completed (state=finished)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,953 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,953 | INFO     | log transfer has been attempted: DONE
[2026-01-26 18:56:22] 2026-01-26 17:55:36,953 | INFO     | job 6983328179 has finished - writing final server update
[2026-01-26 18:56:22] 2026-01-26 17:55:36,953 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,971 | INFO     | using path: /tmp/job_11051154/atlas/pilot/slots/0/PanDA_Pilot-6983328179/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,971 | INFO     | extracted standard info from prmon json
[2026-01-26 18:56:22] 2026-01-26 17:55:36,971 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:56:22] 2026-01-26 17:55:36,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | sum of square deviations: 18381740.0
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | sum of deviations: 210225459.00000003
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | mean x: 1769448832.0
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | mean y: 2512962.5897435895
[2026-01-26 18:56:22] 2026-01-26 17:55:36,972 | INFO     | intersect: -20234047498.1835
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | chi2: 0.00023472233646781973
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | current memory leak: 11.44 B/s (using 39 data points, chi2=0.00)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | could have reported an average CPU frequency of 2614 MHz (5 samples)
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | ..............................
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . Timing measurements:
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . get job = 0 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . initial setup = 2 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . payload setup = 2 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . stage-in = 0 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . payload execution = 2766 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . stage-out = 0 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | . log creation = 0 s
[2026-01-26 18:56:22] 2026-01-26 17:55:36,973 | INFO     | ..............................
[2026-01-26 18:56:22] 2026-01-26 17:55:37,020 | INFO     | 
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | job summary report
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | --------------------------------------------------
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | PanDA job id: 6983328179
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | task id: 48318034
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | errors: (none)
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | pilot state: finished 
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | transexitcode: 0
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | exeerrorcode: 0
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | exeerrordiag: 
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | exitcode: 0
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | exitmsg: OK
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | cpuconsumptiontime: 20064 s
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | nevents: 400
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | neventsw: 0
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | pid: 21428
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | pgrp: 21428
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | corecount: 8
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | event service: False
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | sizes: {0: 2284063, 1: 2284325, 11: 2284353, 2772: 2318817, 2774: 2318987}
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | --------------------------------------------------
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | 
[2026-01-26 18:56:22] 2026-01-26 17:55:37,021 | INFO     | executing command: ls -lF /tmp/job_11051154/atlas/pilot/slots/0
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | job 6983328179 has completed (purged errors)
[2026-01-26 18:56:22] 2026-01-26 17:55:37,031 | INFO     | overall cleanup function is called
[2026-01-26 18:56:22] 2026-01-26 17:55:38,037 | INFO     | --- collectZombieJob: --- 10, [21428]
[2026-01-26 18:56:22] 2026-01-26 17:55:38,037 | INFO     | zombie collector waiting for pid 21428
[2026-01-26 18:56:22] 2026-01-26 17:55:38,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:56:22] 2026-01-26 17:55:38,037 | INFO     | collected zombie processes
[2026-01-26 18:56:22] 2026-01-26 17:55:38,037 | INFO     | will attempt to kill all subprocesses of pid=21428
[2026-01-26 18:56:22] 2026-01-26 17:55:38,147 | INFO     | process IDs to be killed: [21428] (in reverse order)
[2026-01-26 18:56:22] 2026-01-26 17:55:38,184 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:56:22] 2026-01-26 17:55:38,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:56:22] 2026-01-26 17:55:38,189 | INFO     | did not find any defunct processes belonging to 21428
[2026-01-26 18:56:22] 2026-01-26 17:55:38,192 | INFO     | did not find any defunct processes belonging to 21428
[2026-01-26 18:56:22] 2026-01-26 17:55:38,192 | INFO     | ready for new job
[2026-01-26 18:56:22] 2026-01-26 17:55:38,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:56:22] 2026-01-26 17:55:38,193 | INFO     | **************************************
[2026-01-26 18:56:22] 2026-01-26 17:55:38,193 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:56:22] 2026-01-26 17:55:38,193 | INFO     | **************************************
[2026-01-26 18:56:22] 2026-01-26 17:55:38,193 | INFO     | 
[2026-01-26 18:56:22] 2026-01-26 17:55:38,207 | INFO     | architecture information:
[2026-01-26 18:56:22] 2026-01-26 17:55:38,207 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:56:22] 2026-01-26 17:55:38,212 | INFO     | cat /etc/os-release:
[2026-01-26 18:56:22] NAME="CentOS Linux"
[2026-01-26 18:56:22] VERSION="7 (Core)"
[2026-01-26 18:56:22] ID="centos"
[2026-01-26 18:56:22] ID_LIKE="rhel fedora"
[2026-01-26 18:56:22] VERSION_ID="7"
[2026-01-26 18:56:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:56:22] ANSI_COLOR="0;31"
[2026-01-26 18:56:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:56:22] HOME_URL="https://www.centos.org/"
[2026-01-26 18:56:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:56:22] 
[2026-01-26 18:56:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:56:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:56:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:56:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:56:22] 
[2026-01-26 18:56:22] 2026-01-26 17:55:38,212 | INFO     | **************************************
[2026-01-26 18:56:22] 2026-01-26 17:55:38,714 | INFO     | executing command: df -mP /tmp/job_11051154/atlas/pilot/slots/0
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | INFO     | sufficient remaining disk space (220063596544 B)
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | INFO     | update_server=False
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:56:22] 2026-01-26 17:55:38,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:56:22] 2026-01-26 17:55:38,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:56:22] 2026-01-26 17:55:39,089 | INFO     | all payload control threads have been joined
[2026-01-26 18:56:22] 2026-01-26 17:55:39,382 | INFO     | all data control threads have been joined
[2026-01-26 18:56:22] 2026-01-26 17:55:39,430 | INFO     | all job control threads have been joined
[2026-01-26 18:56:22] 2026-01-26 17:55:39,571 | WARNING  | process 21428 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 18:56:22] 2026-01-26 17:55:39,658 | INFO     | using path: /tmp/job_11051154/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:56:22] 2026-01-26 17:55:39,725 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:39,725 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:39,765 | INFO     | number of running child processes to parent process 21428: 1
[2026-01-26 18:56:22] 2026-01-26 17:55:39,765 | INFO     | maximum number of monitored processes: 6
[2026-01-26 18:56:22] 2026-01-26 17:55:39,765 | INFO     | aborting job monitoring since job object (job id=6983328179) has expired
[2026-01-26 18:56:22] 2026-01-26 17:55:39,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:56:22] 2026-01-26 17:55:39,765 | INFO     | will abort loop
[2026-01-26 18:56:22] 2026-01-26 17:55:40,094 | INFO     | [payload] control thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,095 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,383 | INFO     | [data] control thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,436 | INFO     | [job] control thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,474 | INFO     | job.realtimelogging is not enabled
[2026-01-26 18:56:22] 2026-01-26 17:55:40,647 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,725 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,771 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,924 | INFO     | [job] validate thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,943 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:40,993 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:41,091 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:41,225 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:41,479 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:55:41,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:56:22] 2026-01-26 17:55:45,633 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:56:22] 2026-01-26 17:56:09,192 | INFO     | PID=16952 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 18:56:22] 2026-01-26 17:56:09,192 | INFO     | .. there are 6 such processes running
[2026-01-26 18:56:22] 2026-01-26 17:56:09,192 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:56:22] 2026-01-26 17:56:09,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:56:22] 2026-01-26 17:56:09,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:56:22] 2026-01-26 17:56:16,361 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:56:22] 2026-01-26 17:56:17,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058980096)>']
[2026-01-26 18:56:22] 2026-01-26 17:56:18,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:56:22] 2026-01-26 17:56:18,236 | INFO     | [monitor] control thread has ended
[2026-01-26 18:56:22] 2026-01-26 17:56:22,645 | INFO     | all workflow threads have been joined
[2026-01-26 18:56:22] 2026-01-26 17:56:22,645 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:56:22] 2026-01-26 17:56:22,645 | INFO     | traces error code: 0
[2026-01-26 18:56:22] 2026-01-26 17:56:22,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:56:22] 2026-01-26 17:56:22,695 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:56:22] 2026-01-26 17:56:22,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:56:22] 2026-01-26 17:56:22,697 [wrapper] pilotpid: 16952
[2026-01-26 18:56:22] 2026-01-26 17:56:22,698 [wrapper] Pilot exit status: 0
[2026-01-26 18:56:22] 2026-01-26 17:56:22,702 [wrapper] pandaids: 6983328179
[2026-01-26 18:56:22] 2026-01-26 17:56:22,726 [wrapper] cleanup supervisor_pilot 24630 16953
[2026-01-26 18:56:22] 2026-01-26 17:56:22,727 [wrapper] Test setup, not cleaning
[2026-01-26 18:56:22] 2026-01-26 17:56:22,728 [wrapper] apfmon messages muted
[2026-01-26 18:56:22] 2026-01-26 17:56:22,729 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:56:22] 2026-01-26 17:56:22,730 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:56:22]  *** Error codes and diagnostics ***
[2026-01-26 18:56:22]     "exeErrorCode": 0,
[2026-01-26 18:56:22]     "exeErrorDiag": "",
[2026-01-26 18:56:22]     "pilotErrorCode": 0,
[2026-01-26 18:56:22]     "pilotErrorDiag": "",
[2026-01-26 18:56:22]  *** Listing of results directory ***
[2026-01-26 18:56:22] total 665528
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-26 18:56:22] -rwx------ 1 mf493845 unix-user     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      5111 Jan 25 19:50 queuedata.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       100 Jan 26 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:56:22] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 26 16:03 run_atlas
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       105 Jan 26 16:03 job.xml
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user 494966877 Jan 26 18:09 EVNT.48318032._000024.pool.root.1
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 26 18:09 start_atlas.sh
[2026-01-26 18:56:22] drwxrwx--x 2 mf493845 unix-user       100 Jan 26 18:09 shared
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user    597759 Jan 26 18:09 input.tar.gz
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      6389 Jan 26 18:09 init_data.xml
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user         0 Jan 26 18:09 boinc_setup_complete
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      8192 Jan 26 18:09 boinc_mmap_file
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user         0 Jan 26 18:09 boinc_lockfile
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      2532 Jan 26 18:09 pandaJob.out
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user   1006276 Jan 26 18:09 agis_schedconf.cvmfs.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user   1516246 Jan 26 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       420 Jan 26 18:09 workernode_map.json
[2026-01-26 18:56:22] drwx------ 5 mf493845 unix-user       440 Jan 26 18:09 pilot3
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user 181157285 Jan 26 18:55 HITS.48318034._001155.pool.root.1
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      1014 Jan 26 18:55 memory_monitor_summary.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user    287365 Jan 26 18:55 log.48318034._001155.job.log.tgz.1
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      6308 Jan 26 18:55 heartbeat.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user        95 Jan 26 18:56 pilot_heartbeat.json
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      5435 Jan 26 18:56 pilotlog.txt
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user    445384 Jan 26 18:56 log.48318034._001155.job.log.1
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       357 Jan 26 18:56 output.list
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       620 Jan 26 18:56 runtime_log
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user    747520 Jan 26 18:56 result.tar.gz
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user      9219 Jan 26 18:56 runtime_log.err
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user       641 Jan 26 18:56 2lPKDm7LK48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhW1KDmS4n4Hn.diag
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user     21925 Jan 26 18:56 stderr.txt
[2026-01-26 18:56:22] HITS file was successfully produced:
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user 181157285 Jan 26 18:55 shared/HITS.pool.root.1
[2026-01-26 18:56:22]  *** Contents of shared directory: ***
[2026-01-26 18:56:22] total 661612
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user 494966877 Jan 26 18:09 ATLAS.root_0
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 26 18:09 start_atlas.sh
[2026-01-26 18:56:22] -rw-r--r-- 2 mf493845 unix-user    597759 Jan 26 18:09 input.tar.gz
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user 181157285 Jan 26 18:55 HITS.pool.root.1
[2026-01-26 18:56:22] -rw------- 1 mf493845 unix-user    747520 Jan 26 18:56 result.tar.gz
18:56:23 (13006): run_atlas exited; CPU time 20106.238602
18:56:23 (13006): called boinc_finish(0)

</stderr_txt>
]]>

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