Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:48:43 (1796814): wrapper (7.7.26015): starting
03:48:43 (1796814): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 03:48:43] Arguments: --nthreads 4
[2026-01-27 03:48:43] Threads: 4
[2026-01-27 03:48:43] Checking for CVMFS
[2026-01-27 03:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 03:48:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 03:48:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 03:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 03:48:44] 2.13.3.0 1352486 5183 58344 155571 2 50 3438415 4096001 0 130560 0 1385612 99.975 191250 2349 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 03:48:44] CVMFS is ok
[2026-01-27 03:48:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 03:48:44] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 03:48:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 03:48:44] Further information can be found at the LHC@home message board.
[2026-01-27 03:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 03:48:44] Checking for apptainer binary...
[2026-01-27 03:48:44] apptainer is not installed, using version from CVMFS
[2026-01-27 03:48:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 03:48:44] localhost
[2026-01-27 03:48:44] apptainer works
[2026-01-27 03:48:44] Set ATHENA_PROC_NUMBER=4
[2026-01-27 03:48:44] Set ATHENA_CORE_NUMBER=4
[2026-01-27 03:48:44] Starting ATLAS job with PandaID=6983771261
[2026-01-27 03:48:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 06:40:28]  *** The last 200 lines of the pilot log: ***
[2026-01-27 06:40:28] 2026-01-27 06:39:56,726 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 06:40:28] 2026-01-27 06:39:56,778 | INFO     | job 6983771261 has state=finished
[2026-01-27 06:40:28] 2026-01-27 06:39:56,778 | INFO     | preparing for final server update for job 6983771261 in state='finished'
[2026-01-27 06:40:28] 2026-01-27 06:39:56,778 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-6983771261/jobReport.json
[2026-01-27 06:40:28] 2026-01-27 06:39:56,779 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-01-27 06:40:28] 2026-01-27 06:39:56,780 | INFO     | this job has now completed (state=finished)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,780 | INFO     | log transfer has been attempted: DONE
[2026-01-27 06:40:28] 2026-01-27 06:39:56,780 | INFO     | job 6983771261 has finished - writing final server update
[2026-01-27 06:40:28] 2026-01-27 06:39:56,780 | INFO     | total number of processed events: 400 (read)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,781 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6983771261/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,781 | INFO     | extracted standard info from prmon json
[2026-01-27 06:40:28] 2026-01-27 06:39:56,781 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 06:40:28] 2026-01-27 06:39:56,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 06:40:28] 2026-01-27 06:39:56,782 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 06:40:28] 2026-01-27 06:39:56,782 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 06:40:28] 2026-01-27 06:39:56,783 | INFO     | fitting pss+swap vs Time
[2026-01-27 06:40:28] 2026-01-27 06:39:56,784 | INFO     | sum of square deviations: 1470248962.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,784 | INFO     | sum of deviations: -16870903834.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,784 | INFO     | mean x: 1769490854.5
[2026-01-27 06:40:28] 2026-01-27 06:39:56,784 | INFO     | mean y: 2399083.988095238
[2026-01-27 06:40:28] 2026-01-27 06:39:56,784 | INFO     | intersect: 20307062316.53523
[2026-01-27 06:40:28] 2026-01-27 06:39:56,785 | INFO     | chi2: 1.3626839096999266
[2026-01-27 06:40:28] 2026-01-27 06:39:56,785 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,785 | INFO     | sum of deviations: -16473782914.999998
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | mean x: 1769490702.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | mean y: 2399561.8711656444
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | intersect: 21710245598.911224
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | chi2: 1.3582524032217147
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | current chi2=1.3582524032217147 (change=0.325204285943887 %)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | right removable region: 162
[2026-01-27 06:40:28] 2026-01-27 06:39:56,786 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | sum of deviations: -27547294938.999996
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | mean x: 1769491007.0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | mean y: 2411435.435582822
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | intersect: 36302060607.19946
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | chi2: 0.2979910687739055
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | current chi2=0.2979910687739055 (change=78.13204759719183 %)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,787 | INFO     | sum of square deviations: 1223016419.5
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | sum of deviations: -19068666398.500004
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | mean x: 1769491159.5
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | mean y: 2400638.4367088606
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | intersect: 27591430579.175343
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | chi2: 0.248553397810689
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | current chi2=0.248553397810689 (change=16.590319692006045 %)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,788 | INFO     | left removable region: 20
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | sum of square deviations: 887813855.5
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | sum of deviations: -1438019246.0000005
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | mean x: 1769491281.5
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | mean y: 2375451.8450704226
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | intersect: 2868474581.3671646
[2026-01-27 06:40:28] 2026-01-27 06:39:56,789 | INFO     | chi2: 0.06032071684962708
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | current memory leak: -1.62 B/s (using 142 data points, chi2=0.06)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | ..............................
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . Timing measurements:
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . get job = 0 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . initial setup = 9 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . payload setup = 3 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . stage-in = 0 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . payload execution = 10230 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . stage-out = 0 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | . log creation = 0 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,790 | INFO     | ..............................
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | 
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | job summary report
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | --------------------------------------------------
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | PanDA job id: 6983771261
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | task id: 48329373
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | errors: (none)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | pilot state: finished 
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | transexitcode: 0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | exeerrorcode: 0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | exeerrordiag: 
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | exitcode: 0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | exitmsg: OK
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | cpuconsumptiontime: 39869 s
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | nevents: 400
[2026-01-27 06:40:28] 2026-01-27 06:39:56,846 | INFO     | neventsw: 0
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | pid: 1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | pgrp: 1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | corecount: 4
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | event service: False
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | sizes: {0: 2284147, 1: 2284353, 11: 2284381, 10237: 2313347, 10238: 2313346, 10239: 2322400, 10243: 2322842}
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | --------------------------------------------------
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | 
[2026-01-27 06:40:28] 2026-01-27 06:39:56,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | job 6983771261 has completed (purged errors)
[2026-01-27 06:40:28] 2026-01-27 06:39:56,866 | INFO     | overall cleanup function is called
[2026-01-27 06:40:28] 2026-01-27 06:39:57,875 | INFO     | --- collectZombieJob: --- 10, [1805195]
[2026-01-27 06:40:28] 2026-01-27 06:39:57,875 | INFO     | zombie collector waiting for pid 1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:57,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 06:40:28] 2026-01-27 06:39:57,875 | INFO     | collected zombie processes
[2026-01-27 06:40:28] 2026-01-27 06:39:57,875 | INFO     | will attempt to kill all subprocesses of pid=1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:57,904 | INFO     | process IDs to be killed: [1805195] (in reverse order)
[2026-01-27 06:40:28] 2026-01-27 06:39:57,930 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 06:40:28] 2026-01-27 06:39:57,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 06:40:28] 2026-01-27 06:39:57,931 | INFO     | did not find any defunct processes belonging to 1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:57,932 | INFO     | did not find any defunct processes belonging to 1805195
[2026-01-27 06:40:28] 2026-01-27 06:39:57,932 | INFO     | ready for new job
[2026-01-27 06:40:28] 2026-01-27 06:39:57,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 06:40:28] 2026-01-27 06:39:57,934 | INFO     | **************************************
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | **************************************
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | 
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | pilot is running in a VM
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | architecture information:
[2026-01-27 06:40:28] 2026-01-27 06:39:57,935 | INFO     | executing command: cat /etc/os-release
[2026-01-27 06:40:28] 2026-01-27 06:39:57,945 | INFO     | cat /etc/os-release:
[2026-01-27 06:40:28] NAME="CentOS Linux"
[2026-01-27 06:40:28] VERSION="7 (Core)"
[2026-01-27 06:40:28] ID="centos"
[2026-01-27 06:40:28] ID_LIKE="rhel fedora"
[2026-01-27 06:40:28] VERSION_ID="7"
[2026-01-27 06:40:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 06:40:28] ANSI_COLOR="0;31"
[2026-01-27 06:40:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 06:40:28] HOME_URL="https://www.centos.org/"
[2026-01-27 06:40:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 06:40:28] 
[2026-01-27 06:40:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 06:40:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 06:40:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 06:40:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 06:40:28] 
[2026-01-27 06:40:28] 2026-01-27 06:39:57,945 | INFO     | **************************************
[2026-01-27 06:40:28] 2026-01-27 06:39:58,448 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | INFO     | sufficient remaining disk space (147543031808 B)
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | INFO     | update_server=False
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 06:40:28] 2026-01-27 06:39:58,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:40:28] 2026-01-27 06:39:58,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 06:40:28] 2026-01-27 06:39:58,754 | INFO     | all data control threads have been joined
[2026-01-27 06:40:28] 2026-01-27 06:39:59,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 06:40:28] 2026-01-27 06:39:59,053 | INFO     | all job control threads have been joined
[2026-01-27 06:40:28] 2026-01-27 06:39:59,328 | INFO     | all payload control threads have been joined
[2026-01-27 06:40:28] 2026-01-27 06:39:59,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:40:28] 2026-01-27 06:39:59,343 | INFO     | aborting loop
[2026-01-27 06:40:28] 2026-01-27 06:39:59,467 | INFO     | [job] retrieve thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:39:59,467 | INFO     | [job] queue monitor thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:39:59,759 | INFO     | [data] control thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:39:59,843 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,059 | INFO     | [job] control thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,248 | INFO     | [payload] failed_post thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,334 | INFO     | [payload] control thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,345 | INFO     | [job] job monitor thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,409 | INFO     | [job] validate thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,495 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,615 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,811 | INFO     | [payload] validate_post thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:00,865 | INFO     | [data] copytool_in thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:01,038 | INFO     | [data] copytool_out thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:02,468 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:09,298 | INFO     | job.realtimelogging is not enabled
[2026-01-27 06:40:28] 2026-01-27 06:40:10,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 06:40:28] 2026-01-27 06:40:19,652 | INFO     | [monitor] cgroup control has ended
[2026-01-27 06:40:28] 2026-01-27 06:40:20,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259093124928)>', '<ExcThread(monitor, started 140258498819840)>']
[2026-01-27 06:40:28] 2026-01-27 06:40:25,683 | INFO     | all workflow threads have been joined
[2026-01-27 06:40:28] 2026-01-27 06:40:25,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 06:40:28] 2026-01-27 06:40:25,683 | INFO     | traces error code: 0
[2026-01-27 06:40:28] 2026-01-27 06:40:25,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 06:40:28] 2026-01-27 06:40:28,412 | INFO     | PID=1800818 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 06:40:28] 2026-01-27 06:40:28,413 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 06:40:28] 2026-01-27 06:40:28,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 06:40:28] 2026-01-27 06:40:28,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 06:40:28] 2026-01-27 06:40:28,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 06:40:28] 2026-01-27 06:40:28,413 | INFO     | [monitor] control thread has ended
[2026-01-27 06:40:28] 2026-01-27 06:40:28,496 [wrapper] ==== pilot stdout END ====
[2026-01-27 06:40:28] 2026-01-27 06:40:28,498 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 06:40:28] 2026-01-27 06:40:28,500 [wrapper] pilotpid: 1800818
[2026-01-27 06:40:28] 2026-01-27 06:40:28,502 [wrapper] Pilot exit status: 0
[2026-01-27 06:40:28] 2026-01-27 06:40:28,511 [wrapper] pandaids: 6983771261
[2026-01-27 06:40:28] 2026-01-27 06:40:28,529 [wrapper] cleanup supervisor_pilot 1810995 1800819
[2026-01-27 06:40:28] 2026-01-27 06:40:28,531 [wrapper] Test setup, not cleaning
[2026-01-27 06:40:28] 2026-01-27 06:40:28,533 [wrapper] apfmon messages muted
[2026-01-27 06:40:28] 2026-01-27 06:40:28,536 [wrapper] ==== wrapper stdout END ====
[2026-01-27 06:40:28] 2026-01-27 06:40:28,538 [wrapper] ==== wrapper stderr END ====
[2026-01-27 06:40:28]  *** Error codes and diagnostics ***
[2026-01-27 06:40:28]     "exeErrorCode": 0,
[2026-01-27 06:40:28]     "exeErrorDiag": "",
[2026-01-27 06:40:28]     "pilotErrorCode": 0,
[2026-01-27 06:40:28]     "pilotErrorDiag": "",
[2026-01-27 06:40:28]  *** Listing of results directory ***
[2026-01-27 06:40:28] total 443152
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc    584422 Jan 26 01:12 pilot3.tar.gz
[2026-01-27 06:40:28] -rwx------ 1 boinc boinc     36322 Jan 26 01:12 runpilot2-wrapper.sh
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc      5111 Jan 26 01:14 queuedata.json
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc       100 Jan 27 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 06:40:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 03:48 run_atlas
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc       105 Jan 27 03:48 job.xml
[2026-01-27 06:40:28] drwxrwx--x 2 boinc boinc      4096 Jan 27 03:48 shared
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc    597772 Jan 27 03:48 input.tar.gz
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc 269305392 Jan 27 03:48 EVNT.48329371._000004.pool.root.1
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:48 start_atlas.sh
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc      5959 Jan 27 03:48 init_data.xml
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:48 boinc_setup_complete
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:48 boinc_lockfile
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc      2605 Jan 27 03:48 pandaJob.out
[2026-01-27 06:40:28] -rw------- 1 boinc boinc   1006433 Jan 27 03:48 agis_schedconf.cvmfs.json
[2026-01-27 06:40:28] -rw------- 1 boinc boinc   1516246 Jan 27 03:48 agis_ddmendpoints.agis.ALL.json
[2026-01-27 06:40:28] -rw------- 1 boinc boinc       406 Jan 27 03:49 workernode_map.json
[2026-01-27 06:40:28] drwx------ 5 boinc boinc      4096 Jan 27 03:49 pilot3
[2026-01-27 06:40:28] -rw------- 1 boinc boinc 176932505 Jan 27 06:39 HITS.48329373._000097.pool.root.1
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc       530 Jan 27 06:39 boinc_task_state.xml
[2026-01-27 06:40:28] -rw------- 1 boinc boinc       997 Jan 27 06:39 memory_monitor_summary.json
[2026-01-27 06:40:28] -rw------- 1 boinc boinc        95 Jan 27 06:39 pilot_heartbeat.json
[2026-01-27 06:40:28] -rw------- 1 boinc boinc    349191 Jan 27 06:39 log.48329373._000097.job.log.tgz.1
[2026-01-27 06:40:28] -rw------- 1 boinc boinc      6227 Jan 27 06:39 heartbeat.json
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc      8192 Jan 27 06:40 boinc_mmap_file
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc        28 Jan 27 06:40 wrapper_checkpoint.txt
[2026-01-27 06:40:28] -rw------- 1 boinc boinc       747 Jan 27 06:40 pilotlog.txt
[2026-01-27 06:40:28] -rw------- 1 boinc boinc   1454141 Jan 27 06:40 log.48329373._000097.job.log.1
[2026-01-27 06:40:28] -rw------- 1 boinc boinc       357 Jan 27 06:40 output.list
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc       620 Jan 27 06:40 runtime_log
[2026-01-27 06:40:28] -rw------- 1 boinc boinc   1822720 Jan 27 06:40 result.tar.gz
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc      8778 Jan 27 06:40 runtime_log.err
[2026-01-27 06:40:28] -rw------- 1 boinc boinc       647 Jan 27 06:40 9EOLDmpKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwB2KDmimCmqm.diag
[2026-01-27 06:40:28] -rw-r--r-- 1 boinc boinc     21317 Jan 27 06:40 stderr.txt
[2026-01-27 06:40:28] HITS file was successfully produced:
[2026-01-27 06:40:28] -rw------- 1 boinc boinc 176932505 Jan 27 06:39 shared/HITS.pool.root.1
[2026-01-27 06:40:28]  *** Contents of shared directory: ***
[2026-01-27 06:40:28] total 438172
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc    597772 Jan 27 03:48 input.tar.gz
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc 269305392 Jan 27 03:48 ATLAS.root_0
[2026-01-27 06:40:28] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:48 start_atlas.sh
[2026-01-27 06:40:28] -rw------- 1 boinc boinc 176932505 Jan 27 06:39 HITS.pool.root.1
[2026-01-27 06:40:28] -rw------- 1 boinc boinc   1822720 Jan 27 06:40 result.tar.gz
06:40:30 (1796814): run_atlas exited; CPU time 39904.701445
06:40:30 (1796814): called boinc_finish(0)

</stderr_txt>
]]>

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