Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:12 (9421): wrapper (7.7.26015): starting
00:08:12 (9421): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:08:12] Arguments: --nthreads 8
[2026-01-27 00:08:12] Threads: 8
[2026-01-27 00:08:12] Checking for CVMFS
[2026-01-27 00:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:08:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:08:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:08:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:08:16] 2.11.2.0 23879 60534 134440 155565 2 79 23625858 25165824 1088 130560 0 15457143 99.706 16965198 2109 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 00:08:16] CVMFS is ok
[2026-01-27 00:08:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:08:16] Checking for apptainer binary...
[2026-01-27 00:08:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:08:16] Running /usr/bin/apptainer --version
[2026-01-27 00:08:16] apptainer version 1.3.2-1.el7
[2026-01-27 00:08:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:08:27] cg-vwn385.simple-grid.lan
[2026-01-27 00:08:27] apptainer works
[2026-01-27 00:08:27] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:08:27] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:08:28] Starting ATLAS job with PandaID=6983602616
[2026-01-27 00:08:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 05:36:37]  *** The last 200 lines of the pilot log: ***
[2026-01-27 05:36:37] 2026-01-27 04:35:33,929 | INFO     | job 6983602616 has finished - writing final server update
[2026-01-27 05:36:37] 2026-01-27 04:35:33,929 | INFO     | total number of processed events: 400 (read)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,931 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6983602616/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,932 | INFO     | extracted standard info from prmon json
[2026-01-27 05:36:37] 2026-01-27 04:35:33,932 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 05:36:37] 2026-01-27 04:35:33,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 05:36:37] 2026-01-27 04:35:33,932 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 05:36:37] 2026-01-27 04:35:33,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 05:36:37] 2026-01-27 04:35:33,939 | INFO     | fitting pss+swap vs Time
[2026-01-27 05:36:37] 2026-01-27 04:35:33,940 | INFO     | sum of square deviations: 9327281860.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,943 | INFO     | sum of deviations: 94297314393.00003
[2026-01-27 05:36:37] 2026-01-27 04:35:33,943 | INFO     | mean x: 1769479040.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,943 | INFO     | mean y: 2470599.3504823153
[2026-01-27 05:36:37] 2026-01-27 04:35:33,943 | INFO     | intersect: -17886676941.292603
[2026-01-27 05:36:37] 2026-01-27 04:35:33,944 | INFO     | chi2: 8.111970809594457
[2026-01-27 05:36:37] 2026-01-27 04:35:33,945 | INFO     | sum of square deviations: 8884603792.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,948 | INFO     | sum of deviations: 114772113843.00003
[2026-01-27 05:36:37] 2026-01-27 04:35:33,948 | INFO     | mean x: 1769478887.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,948 | INFO     | mean y: 2477553.9738562093
[2026-01-27 05:36:37] 2026-01-27 04:35:33,948 | INFO     | intersect: -22855810453.23837
[2026-01-27 05:36:37] 2026-01-27 04:35:33,949 | INFO     | chi2: 7.302472365510689
[2026-01-27 05:36:37] 2026-01-27 04:35:33,949 | INFO     | current chi2=7.302472365510689 (change=9.979060120955205 %)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,949 | INFO     | right removable region: 305
[2026-01-27 05:36:37] 2026-01-27 04:35:33,950 | INFO     | sum of square deviations: 8884603792.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,953 | INFO     | sum of deviations: -13992413172.499989
[2026-01-27 05:36:37] 2026-01-27 04:35:33,953 | INFO     | mean x: 1769479192.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,954 | INFO     | mean y: 2507882.748366013
[2026-01-27 05:36:37] 2026-01-27 04:35:33,954 | INFO     | intersect: 2789270752.523422
[2026-01-27 05:36:37] 2026-01-27 04:35:33,954 | INFO     | chi2: 3.338846641343202
[2026-01-27 05:36:37] 2026-01-27 04:35:33,955 | INFO     | current chi2=3.338846641343202 (change=58.840499803153 %)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,955 | INFO     | sum of square deviations: 8456158550.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,958 | INFO     | sum of deviations: -84223795072.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,959 | INFO     | mean x: 1769479345.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,959 | INFO     | mean y: 2532808.405315615
[2026-01-27 05:36:37] 2026-01-27 04:35:33,959 | INFO     | intersect: 17626642486.128517
[2026-01-27 05:36:37] 2026-01-27 04:35:33,959 | INFO     | chi2: 1.2096812561513266
[2026-01-27 05:36:37] 2026-01-27 04:35:33,960 | INFO     | current chi2=1.2096812561513266 (change=63.76948730820779 %)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,960 | INFO     | sum of square deviations: 8041713570.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,963 | INFO     | sum of deviations: -93911494181.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,963 | INFO     | mean x: 1769479497.5
[2026-01-27 05:36:37] 2026-01-27 04:35:33,963 | INFO     | mean y: 2536355.685810811
[2026-01-27 05:36:37] 2026-01-27 04:35:33,964 | INFO     | intersect: 20666597825.579075
[2026-01-27 05:36:37] 2026-01-27 04:35:33,964 | INFO     | chi2: 1.1342006525128066
[2026-01-27 05:36:37] 2026-01-27 04:35:33,964 | INFO     | current chi2=1.1342006525128066 (change=6.23971010997278 %)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,964 | INFO     | left removable region: 30
[2026-01-27 05:36:37] 2026-01-27 04:35:33,965 | INFO     | sum of square deviations: 6448679050.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,967 | INFO     | sum of deviations: -47378305086.00001
[2026-01-27 05:36:37] 2026-01-27 04:35:33,968 | INFO     | mean x: 1769479772.0
[2026-01-27 05:36:37] 2026-01-27 04:35:33,968 | INFO     | mean y: 2535012.8254545457
[2026-01-27 05:36:37] 2026-01-27 04:35:33,968 | INFO     | intersect: 13002864511.51895
[2026-01-27 05:36:37] 2026-01-27 04:35:33,969 | INFO     | chi2: 0.1986734741215049
[2026-01-27 05:36:37] 2026-01-27 04:35:33,969 | INFO     | current memory leak: -7.35 B/s (using 275 data points, chi2=0.20)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,970 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-27 05:36:37] 2026-01-27 04:35:33,970 | INFO     | ..............................
[2026-01-27 05:36:37] 2026-01-27 04:35:33,970 | INFO     | . Timing measurements:
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . get job = 0 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . initial setup = 117 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . payload setup = 147 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . stage-in = 0 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . payload execution = 19067 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . stage-out = 1 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | . log creation = 0 s
[2026-01-27 05:36:37] 2026-01-27 04:35:33,971 | INFO     | ..............................
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | 
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | job summary report
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | --------------------------------------------------
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | PanDA job id: 6983602616
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | task id: 48330021
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | errors: (none)
[2026-01-27 05:36:37] 2026-01-27 04:35:34,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | pilot state: finished 
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | transexitcode: 0
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | exeerrorcode: 0
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | exeerrordiag: 
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | exitcode: 0
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | exitmsg: OK
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | cpuconsumptiontime: 72468 s
[2026-01-27 05:36:37] 2026-01-27 04:35:34,089 | INFO     | nevents: 400
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | neventsw: 0
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | pid: 17856
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | pgrp: 17856
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | corecount: 8
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | event service: False
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | sizes: {0: 2283896, 1: 2284353, 2: 2284413, 12: 2284441, 19219: 2317098, 19222: 2326282, 19223: 2326420}
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | --------------------------------------------------
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | 
[2026-01-27 05:36:37] 2026-01-27 04:35:34,090 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-27 05:36:37] 2026-01-27 04:35:34,131 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | job 6983602616 has completed (purged errors)
[2026-01-27 05:36:37] 2026-01-27 04:35:34,134 | INFO     | overall cleanup function is called
[2026-01-27 05:36:37] 2026-01-27 04:35:35,143 | INFO     | --- collectZombieJob: --- 10, [17856]
[2026-01-27 05:36:37] 2026-01-27 04:35:35,143 | INFO     | zombie collector waiting for pid 17856
[2026-01-27 05:36:37] 2026-01-27 04:35:35,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 05:36:37] 2026-01-27 04:35:35,144 | INFO     | collected zombie processes
[2026-01-27 05:36:37] 2026-01-27 04:35:35,144 | INFO     | will attempt to kill all subprocesses of pid=17856
[2026-01-27 05:36:37] 2026-01-27 04:35:35,218 | INFO     | process IDs to be killed: [17856] (in reverse order)
[2026-01-27 05:36:37] 2026-01-27 04:35:35,293 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 05:36:37] 2026-01-27 04:35:35,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 05:36:37] 2026-01-27 04:35:35,296 | INFO     | did not find any defunct processes belonging to 17856
[2026-01-27 05:36:37] 2026-01-27 04:35:35,298 | INFO     | did not find any defunct processes belonging to 17856
[2026-01-27 05:36:37] 2026-01-27 04:35:35,298 | INFO     | ready for new job
[2026-01-27 05:36:37] 2026-01-27 04:35:35,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 05:36:37] 2026-01-27 04:35:35,300 | INFO     | **************************************
[2026-01-27 05:36:37] 2026-01-27 04:35:35,301 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 05:36:37] 2026-01-27 04:35:35,301 | INFO     | **************************************
[2026-01-27 05:36:37] 2026-01-27 04:35:35,301 | INFO     | 
[2026-01-27 05:36:37] 2026-01-27 04:35:35,301 | INFO     | pilot is running in a VM
[2026-01-27 05:36:37] 2026-01-27 04:35:35,302 | INFO     | architecture information:
[2026-01-27 05:36:37] 2026-01-27 04:35:35,302 | INFO     | executing command: cat /etc/os-release
[2026-01-27 05:36:37] 2026-01-27 04:35:35,325 | INFO     | cat /etc/os-release:
[2026-01-27 05:36:37] NAME="CentOS Linux"
[2026-01-27 05:36:37] VERSION="7 (Core)"
[2026-01-27 05:36:37] ID="centos"
[2026-01-27 05:36:37] ID_LIKE="rhel fedora"
[2026-01-27 05:36:37] VERSION_ID="7"
[2026-01-27 05:36:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 05:36:37] ANSI_COLOR="0;31"
[2026-01-27 05:36:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 05:36:37] HOME_URL="https://www.centos.org/"
[2026-01-27 05:36:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 05:36:37] 
[2026-01-27 05:36:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 05:36:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 05:36:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 05:36:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 05:36:37] 
[2026-01-27 05:36:37] 2026-01-27 04:35:35,325 | INFO     | **************************************
[2026-01-27 05:36:37] 2026-01-27 04:35:35,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-27 05:36:37] 2026-01-27 04:35:35,850 | INFO     | sufficient remaining disk space (494637416448 B)
[2026-01-27 05:36:37] 2026-01-27 04:35:35,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 05:36:37] 2026-01-27 04:35:35,851 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 05:36:37] 2026-01-27 04:35:35,851 | INFO     | update_server=False
[2026-01-27 05:36:37] 2026-01-27 04:35:35,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 05:36:37] 2026-01-27 04:35:35,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:36:37] 2026-01-27 04:35:35,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:36:37] 2026-01-27 04:35:35,852 | INFO     | aborting loop
[2026-01-27 05:36:37] 2026-01-27 04:35:35,864 | INFO     | all payload control threads have been joined
[2026-01-27 05:36:37] 2026-01-27 04:35:36,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 05:36:37] 2026-01-27 04:35:36,466 | INFO     | all data control threads have been joined
[2026-01-27 05:36:37] 2026-01-27 04:35:36,475 | INFO     | all job control threads have been joined
[2026-01-27 05:36:37] 2026-01-27 04:35:36,856 | INFO     | [job] retrieve thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:36,858 | INFO     | [job] queue monitor thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:36,859 | INFO     | [job] job monitor thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:36,870 | INFO     | [payload] control thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:36,949 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:36,981 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,108 | INFO     | [job] validate thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,472 | INFO     | [data] control thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,476 | INFO     | [job] control thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,663 | INFO     | [payload] failed_post thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,700 | INFO     | [payload] validate_post thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:37,965 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:38,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:38,098 | INFO     | [data] copytool_out thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:38,211 | INFO     | [data] copytool_in thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:35:39,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 05:36:37] 2026-01-27 04:35:43,217 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 05:36:37] 2026-01-27 04:36:05,233 | INFO     | 19354s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-27 05:36:37] 2026-01-27 04:36:06,316 | INFO     | PID=13407 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 05:36:37] 2026-01-27 04:36:06,317 | INFO     | .. there are 2 such processes running
[2026-01-27 05:36:37] 2026-01-27 04:36:06,317 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 05:36:37] 2026-01-27 04:36:06,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 05:36:37] 2026-01-27 04:36:06,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 05:36:37] 2026-01-27 04:36:31,264 | INFO     | [monitor] cgroup control has ended
[2026-01-27 05:36:37] 2026-01-27 04:36:32,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384343340864)>', '<ExcThread(monitor, started 140384051111680)>']
[2026-01-27 05:36:37] 2026-01-27 04:36:32,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 05:36:37] 2026-01-27 04:36:32,438 | INFO     | [monitor] control thread has ended
[2026-01-27 05:36:37] 2026-01-27 04:36:37,283 | INFO     | all workflow threads have been joined
[2026-01-27 05:36:37] 2026-01-27 04:36:37,283 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 05:36:37] 2026-01-27 04:36:37,283 | INFO     | traces error code: 0
[2026-01-27 05:36:37] 2026-01-27 04:36:37,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 05:36:37] 2026-01-27 04:36:37,432 [wrapper] ==== pilot stdout END ====
[2026-01-27 05:36:37] 2026-01-27 04:36:37,438 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 05:36:37] 2026-01-27 04:36:37,443 [wrapper] pilotpid: 13407
[2026-01-27 05:36:37] 2026-01-27 04:36:37,450 [wrapper] Pilot exit status: 0
[2026-01-27 05:36:37] 2026-01-27 04:36:37,473 [wrapper] pandaids: 6983602616
[2026-01-27 05:36:37] 2026-01-27 04:36:37,533 [wrapper] cleanup supervisor_pilot 25646 13408
[2026-01-27 05:36:37] 2026-01-27 04:36:37,537 [wrapper] Test setup, not cleaning
[2026-01-27 05:36:37] 2026-01-27 04:36:37,549 [wrapper] apfmon messages muted
[2026-01-27 05:36:37] 2026-01-27 04:36:37,554 [wrapper] ==== wrapper stdout END ====
[2026-01-27 05:36:37] 2026-01-27 04:36:37,564 [wrapper] ==== wrapper stderr END ====
[2026-01-27 05:36:37]  *** Error codes and diagnostics ***
[2026-01-27 05:36:37]     "exeErrorCode": 0,
[2026-01-27 05:36:37]     "exeErrorDiag": "",
[2026-01-27 05:36:37]     "pilotErrorCode": 0,
[2026-01-27 05:36:37]     "pilotErrorDiag": "",
[2026-01-27 05:36:37]  *** Listing of results directory ***
[2026-01-27 05:36:37] total 411708
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 05:36:37] -rwx------. 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc      5111 Jan 26 02:14 queuedata.json
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc       100 Jan 27 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 05:36:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 00:08 run_atlas
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc       105 Jan 27 00:08 job.xml
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc 244516501 Jan 27 00:08 EVNT.48330019._000004.pool.root.1
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc      6392 Jan 27 00:08 init_data.xml
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:08 start_atlas.sh
[2026-01-27 05:36:37] drwxrwx--x. 2 boinc boinc        68 Jan 27 00:08 shared
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc    597781 Jan 27 00:08 input.tar.gz
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc         0 Jan 27 00:08 boinc_lockfile
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc      2630 Jan 27 00:08 pandaJob.out
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc       415 Jan 27 00:14 workernode_map.json
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc   1006441 Jan 27 00:14 agis_schedconf.cvmfs.json
[2026-01-27 05:36:37] drwx------. 5 boinc boinc      4096 Jan 27 00:14 pilot3
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc 166689107 Jan 27 05:34 HITS.48330021._000142.pool.root.1
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc       531 Jan 27 05:34 boinc_task_state.xml
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc      1010 Jan 27 05:35 memory_monitor_summary.json
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc   1516246 Jan 27 05:35 agis_ddmendpoints.agis.ALL.json
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc    535359 Jan 27 05:35 log.48330021._000142.job.log.tgz.1
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc      6306 Jan 27 05:35 heartbeat.json
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc        95 Jan 27 05:36 pilot_heartbeat.json
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc        28 Jan 27 05:36 wrapper_checkpoint.txt
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc      8192 Jan 27 05:36 boinc_mmap_file
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc      4997 Jan 27 05:36 pilotlog.txt
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc   2692084 Jan 27 05:36 log.48330021._000142.job.log.1
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc       357 Jan 27 05:36 output.list
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc       620 Jan 27 05:36 runtime_log
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc   3246080 Jan 27 05:36 result.tar.gz
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc      8832 Jan 27 05:36 runtime_log.err
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc       656 Jan 27 05:36 8j1MDm0KQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSE2KDmOedwpn.diag
[2026-01-27 05:36:37] -rw-r--r--. 1 boinc boinc     20729 Jan 27 05:36 stderr.txt
[2026-01-27 05:36:37] HITS file was successfully produced:
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc 166689107 Jan 27 05:34 shared/HITS.pool.root.1
[2026-01-27 05:36:37]  *** Contents of shared directory: ***
[2026-01-27 05:36:37] total 405344
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc 244516501 Jan 27 00:08 ATLAS.root_0
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:08 start_atlas.sh
[2026-01-27 05:36:37] -rw-r--r--. 2 boinc boinc    597781 Jan 27 00:08 input.tar.gz
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc 166689107 Jan 27 05:34 HITS.pool.root.1
[2026-01-27 05:36:37] -rw-------. 1 boinc boinc   3246080 Jan 27 05:36 result.tar.gz
05:36:39 (9421): run_atlas exited; CPU time 72689.209937
05:36:39 (9421): called boinc_finish(0)

</stderr_txt>
]]>

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