Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:31 (1657): wrapper (7.7.26015): starting
10:16:31 (1657): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 10:16:31] Arguments: --nthreads 12
[2026-01-26 10:16:31] Threads: 12
[2026-01-26 10:16:31] Checking for CVMFS
[2026-01-26 10:16:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 10:16:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 10:16:32] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 10:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 10:16:32] 2.11.2.0 25590 276371 93200 155551 1 49 11406813 20275200 1 130560 2 130507621 99.947 13397892 25298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 10:16:32] CVMFS is ok
[2026-01-26 10:16:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 10:16:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 10:16:32] Further information can be found at the LHC@home message board.
[2026-01-26 10:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 10:16:32] Checking for apptainer binary...
[2026-01-26 10:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 10:16:32] Running /usr/bin/apptainer --version
[2026-01-26 10:16:32] apptainer version 1.3.2-1.el7
[2026-01-26 10:16:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 10:16:33] c-205-24.aglt2.org
[2026-01-26 10:16:33] apptainer works
[2026-01-26 10:16:33] Set ATHENA_PROC_NUMBER=12
[2026-01-26 10:16:33] Set ATHENA_CORE_NUMBER=12
[2026-01-26 10:16:33] Starting ATLAS job with PandaID=6983014525
[2026-01-26 10:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:31:29]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:31:29]  is_altstaged=None
[2026-01-26 11:31:29]  is_tar=False
[2026-01-26 11:31:29]  lfn=log.48317931._000533.job.log.tgz.1
[2026-01-26 11:31:29]  mtime=0
[2026-01-26 11:31:29]  protocol_id=None
[2026-01-26 11:31:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 11:31:29]  replicas=None
[2026-01-26 11:31:29]  scope=mc23_13p6TeV
[2026-01-26 11:31:29]  status=None
[2026-01-26 11:31:29]  status_code=0
[2026-01-26 11:31:29]  storage_token=
[2026-01-26 11:31:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983014525/log.48317931._000533.job.log.tgz.1
[2026-01-26 11:31:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/49/log.48317931._000533.job.log.tgz.1
[2026-01-26 11:31:29]  workdir=None
[2026-01-26 11:31:29] ]
[2026-01-26 11:31:29] 2026-01-26 16:30:53,538 | INFO     | transferring file log.48317931._000533.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983014525/log.48317931._000533.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 11:31:29] 2026-01-26 16:30:53,538 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983014525/log.48317931._000533.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317931._000533.job
[2026-01-26 11:31:29] 2026-01-26 16:30:53,580 | INFO     | adding to output.list: log.48317931._000533.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/49/log.48317931._000533.job.log.tg
[2026-01-26 11:31:29] 2026-01-26 16:30:53,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 11:31:29] 2026-01-26 16:30:53,581 | INFO     | summary of transferred files:
[2026-01-26 11:31:29] 2026-01-26 16:30:53,582 | INFO     |  -- lfn=log.48317931._000533.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 11:31:29] 2026-01-26 16:30:53,582 | INFO     | stage-out finished correctly
[2026-01-26 11:31:29] 2026-01-26 16:30:53,673 | INFO     | number of running child processes to parent process 10235: 1
[2026-01-26 11:31:29] 2026-01-26 16:30:53,673 | INFO     | maximum number of monitored processes: 6
[2026-01-26 11:31:29] 2026-01-26 16:30:54,211 | INFO     | time since job start (4440s) is within the limit (349056.0s)
[2026-01-26 11:31:29] 2026-01-26 16:30:54,334 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 11:31:29] 2026-01-26 16:30:56,176 | INFO     | monitor loop #337: job 0:6983014525 is in state 'finished'
[2026-01-26 11:31:29] 2026-01-26 16:30:56,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,213 | INFO     | time since job start (4442s) is within the limit (349056.0s)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,782 | INFO     | job 6983014525 has state=finished
[2026-01-26 11:31:29] 2026-01-26 16:30:56,782 | INFO     | preparing for final server update for job 6983014525 in state='finished'
[2026-01-26 11:31:29] 2026-01-26 16:30:56,782 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983014525/jobReport.json
[2026-01-26 11:31:29] 2026-01-26 16:30:56,785 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 11:31:29] 2026-01-26 16:30:56,786 | INFO     | this job has now completed (state=finished)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,786 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,786 | INFO     | log transfer has been attempted: DONE
[2026-01-26 11:31:29] 2026-01-26 16:30:56,786 | INFO     | job 6983014525 has finished - writing final server update
[2026-01-26 11:31:29] 2026-01-26 16:30:56,786 | INFO     | total number of processed events: 400 (read)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,789 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983014525/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,789 | INFO     | extracted standard info from prmon json
[2026-01-26 11:31:29] 2026-01-26 16:30:56,789 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:31:29] 2026-01-26 16:30:56,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:31:29] 2026-01-26 16:30:56,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:31:29] 2026-01-26 16:30:56,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:31:29] 2026-01-26 16:30:56,792 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:31:29] 2026-01-26 16:30:56,792 | INFO     | sum of square deviations: 89127252.5
[2026-01-26 11:31:29] 2026-01-26 16:30:56,792 | INFO     | sum of deviations: -4214410578.0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,792 | INFO     | mean x: 1769442925.5
[2026-01-26 11:31:29] 2026-01-26 16:30:56,792 | INFO     | mean y: 2888256.090909091
[2026-01-26 11:31:29] 2026-01-26 16:30:56,793 | INFO     | intersect: 83671561677.77487
[2026-01-26 11:31:29] 2026-01-26 16:30:56,793 | INFO     | chi2: 0.11876785543804094
[2026-01-26 11:31:29] 2026-01-26 16:30:56,793 | INFO     | current memory leak: -47.29 B/s (using 66 data points, chi2=0.12)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,793 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | ..............................
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . Timing measurements:
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . get job = 0 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . initial setup = 7 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . payload setup = 7 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . stage-in = 0 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . payload execution = 4416 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . stage-out = 0 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,794 | INFO     | . log creation = 0 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,795 | INFO     | ..............................
[2026-01-26 11:31:29] 2026-01-26 16:30:56,871 | INFO     | 
[2026-01-26 11:31:29] 2026-01-26 16:30:56,871 | INFO     | job summary report
[2026-01-26 11:31:29] 2026-01-26 16:30:56,871 | INFO     | --------------------------------------------------
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | PanDA job id: 6983014525
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | task id: 48317931
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | errors: (none)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | pilot state: finished 
[2026-01-26 11:31:29] 2026-01-26 16:30:56,872 | INFO     | transexitcode: 0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | exeerrorcode: 0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | exeerrordiag: 
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | exitcode: 0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | exitmsg: OK
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | cpuconsumptiontime: 46625 s
[2026-01-26 11:31:29] 2026-01-26 16:30:56,873 | INFO     | nevents: 400
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | neventsw: 0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | pid: 10235
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | pgrp: 10235
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | corecount: 12
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | event service: False
[2026-01-26 11:31:29] 2026-01-26 16:30:56,874 | INFO     | sizes: {0: 2283964, 1: 2284170, 11: 2284198, 4427: 2310268, 4428: 2319266, 4429: 2319322, 4431: 2319644}
[2026-01-26 11:31:29] 2026-01-26 16:30:56,875 | INFO     | --------------------------------------------------
[2026-01-26 11:31:29] 2026-01-26 16:30:56,875 | INFO     | 
[2026-01-26 11:31:29] 2026-01-26 16:30:56,875 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 11:31:29] 2026-01-26 16:30:56,900 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,900 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:31:29] 2026-01-26 16:30:56,903 | INFO     | job 6983014525 has completed (purged errors)
[2026-01-26 11:31:29] 2026-01-26 16:30:56,904 | INFO     | overall cleanup function is called
[2026-01-26 11:31:29] 2026-01-26 16:30:57,912 | INFO     | --- collectZombieJob: --- 10, [10235]
[2026-01-26 11:31:29] 2026-01-26 16:30:57,912 | INFO     | zombie collector waiting for pid 10235
[2026-01-26 11:31:29] 2026-01-26 16:30:57,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:31:29] 2026-01-26 16:30:57,913 | INFO     | collected zombie processes
[2026-01-26 11:31:29] 2026-01-26 16:30:57,913 | INFO     | will attempt to kill all subprocesses of pid=10235
[2026-01-26 11:31:29] 2026-01-26 16:30:58,002 | INFO     | process IDs to be killed: [10235] (in reverse order)
[2026-01-26 11:31:29] 2026-01-26 16:30:58,056 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:31:29] 2026-01-26 16:30:58,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:31:29] 2026-01-26 16:30:58,060 | INFO     | did not find any defunct processes belonging to 10235
[2026-01-26 11:31:29] 2026-01-26 16:30:58,062 | INFO     | did not find any defunct processes belonging to 10235
[2026-01-26 11:31:29] 2026-01-26 16:30:58,063 | INFO     | ready for new job
[2026-01-26 11:31:29] 2026-01-26 16:30:58,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:31:29] 2026-01-26 16:30:58,064 | INFO     | **************************************
[2026-01-26 11:31:29] 2026-01-26 16:30:58,064 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:31:29] 2026-01-26 16:30:58,064 | INFO     | **************************************
[2026-01-26 11:31:29] 2026-01-26 16:30:58,065 | INFO     | 
[2026-01-26 11:31:29] 2026-01-26 16:30:58,065 | INFO     | architecture information:
[2026-01-26 11:31:29] 2026-01-26 16:30:58,066 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:31:29] 2026-01-26 16:30:58,082 | INFO     | cat /etc/os-release:
[2026-01-26 11:31:29] NAME="CentOS Linux"
[2026-01-26 11:31:29] VERSION="7 (Core)"
[2026-01-26 11:31:29] ID="centos"
[2026-01-26 11:31:29] ID_LIKE="rhel fedora"
[2026-01-26 11:31:29] VERSION_ID="7"
[2026-01-26 11:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:31:29] ANSI_COLOR="0;31"
[2026-01-26 11:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:31:29] HOME_URL="https://www.centos.org/"
[2026-01-26 11:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:31:29] 
[2026-01-26 11:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:31:29] 
[2026-01-26 11:31:29] 2026-01-26 16:30:58,082 | INFO     | **************************************
[2026-01-26 11:31:29] 2026-01-26 16:30:58,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 11:31:29] 2026-01-26 16:30:58,602 | INFO     | sufficient remaining disk space (28795994112 B)
[2026-01-26 11:31:29] 2026-01-26 16:30:58,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:31:29] 2026-01-26 16:30:58,602 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:31:29] 2026-01-26 16:30:58,603 | INFO     | update_server=False
[2026-01-26 11:31:29] 2026-01-26 16:30:58,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:31:29] 2026-01-26 16:30:58,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:31:29] 2026-01-26 16:30:58,680 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 11:31:29] 2026-01-26 16:30:58,680 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 11:31:29] 2026-01-26 16:30:58,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:31:29] 2026-01-26 16:30:58,681 | INFO     | will abort loop
[2026-01-26 11:31:29] 2026-01-26 16:30:59,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:31:29] 2026-01-26 16:30:59,374 | INFO     | all payload control threads have been joined
[2026-01-26 11:31:29] 2026-01-26 16:30:59,608 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:30:59,609 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:30:59,669 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:30:59,680 | INFO     | all data control threads have been joined
[2026-01-26 11:31:29] 2026-01-26 16:30:59,686 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:30:59,717 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,144 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,223 | INFO     | [job] validate thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,300 | INFO     | all job control threads have been joined
[2026-01-26 11:31:29] 2026-01-26 16:31:00,380 | INFO     | [payload] control thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:31:29] 2026-01-26 16:31:00,589 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,604 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,682 | INFO     | [data] control thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:00,732 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:01,099 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:31:29] 2026-01-26 16:31:01,180 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:01,305 | INFO     | [job] control thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:04,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:09,291 | INFO     | job.realtimelogging is not enabled
[2026-01-26 11:31:29] 2026-01-26 16:31:10,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:31:29] 2026-01-26 16:31:11,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565979481920)>', '<ExcThread(monitor, started 140565412833024)>']
[2026-01-26 11:31:29] 2026-01-26 16:31:16,222 | INFO     | all workflow threads have been joined
[2026-01-26 11:31:29] 2026-01-26 16:31:16,222 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:31:29] 2026-01-26 16:31:16,223 | INFO     | traces error code: 0
[2026-01-26 11:31:29] 2026-01-26 16:31:16,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:31:29] 2026-01-26 16:31:29,411 | INFO     | PID=5774 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 11:31:29] 2026-01-26 16:31:29,411 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:31:29] 2026-01-26 16:31:29,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:31:29] 2026-01-26 16:31:29,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:31:29] 2026-01-26 16:31:29,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:31:29] 2026-01-26 16:31:29,412 | INFO     | [monitor] control thread has ended
[2026-01-26 11:31:29] 2026-01-26 16:31:29,494 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:31:29] 2026-01-26 16:31:29,497 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:31:29] 2026-01-26 16:31:29,501 [wrapper] pilotpid: 5774
[2026-01-26 11:31:29] 2026-01-26 16:31:29,505 [wrapper] Pilot exit status: 0
[2026-01-26 11:31:29] 2026-01-26 16:31:29,520 [wrapper] pandaids: 6983014525
[2026-01-26 11:31:29] 2026-01-26 16:31:29,558 [wrapper] cleanup supervisor_pilot 29928 5775
[2026-01-26 11:31:29] 2026-01-26 16:31:29,562 [wrapper] Test setup, not cleaning
[2026-01-26 11:31:29] 2026-01-26 16:31:29,566 [wrapper] apfmon messages muted
[2026-01-26 11:31:29] 2026-01-26 16:31:29,569 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:31:29] 2026-01-26 16:31:29,573 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:31:29]  *** Error codes and diagnostics ***
[2026-01-26 11:31:29]     "exeErrorCode": 0,
[2026-01-26 11:31:29]     "exeErrorDiag": "",
[2026-01-26 11:31:29]     "pilotErrorCode": 0,
[2026-01-26 11:31:29]     "pilotErrorDiag": "",
[2026-01-26 11:31:29]  *** Listing of results directory ***
[2026-01-26 11:31:29] total 668832
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 09:11 queuedata.json
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 09:11 pilot3.tar.gz
[2026-01-26 11:31:29] -rwx------ 1 boincer umatlas     36322 Jan 25 09:11 runpilot2-wrapper.sh
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas       100 Jan 26 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:31:29] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 10:16 run_atlas
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas       105 Jan 26 10:16 job.xml
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas 498119121 Jan 26 10:16 EVNT.48317929._000011.pool.root.1
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 10:16 start_atlas.sh
[2026-01-26 11:31:29] drwxrwx--x 2 boincer umatlas      4096 Jan 26 10:16 shared
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas    597746 Jan 26 10:16 input.tar.gz
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas         0 Jan 26 10:16 boinc_lockfile
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas      2505 Jan 26 10:16 pandaJob.out
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas        57 Jan 26 10:16 setup.sh.local
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas   1002189 Jan 26 10:16 agis_schedconf.cvmfs.json
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas   1516246 Jan 26 10:16 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas       434 Jan 26 10:16 workernode_map.json
[2026-01-26 11:31:29] drwx------ 5 boincer umatlas      4096 Jan 26 10:16 pilot3
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 11:28 init_data.xml
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas       530 Jan 26 11:30 boinc_task_state.xml
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas 180745709 Jan 26 11:30 HITS.48317931._000533.pool.root.1
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas        95 Jan 26 11:30 pilot_heartbeat.json
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas      1044 Jan 26 11:30 memory_monitor_summary.json
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas    391762 Jan 26 11:30 log.48317931._000533.job.log.tgz.1
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas      6402 Jan 26 11:30 heartbeat.json
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 11:31 boinc_mmap_file
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas        27 Jan 26 11:31 wrapper_checkpoint.txt
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas       744 Jan 26 11:31 pilotlog.txt
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas    647686 Jan 26 11:31 log.48317931._000533.job.log.1
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas       357 Jan 26 11:31 output.list
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas       620 Jan 26 11:31 runtime_log
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas   1054720 Jan 26 11:31 result.tar.gz
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas       659 Jan 26 11:31 YybMDmo0F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsc7KDmYvthZm.diag
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas      9343 Jan 26 11:31 runtime_log.err
[2026-01-26 11:31:29] -rw-r--r-- 1 boincer umatlas     21423 Jan 26 11:31 stderr.txt
[2026-01-26 11:31:29] HITS file was successfully produced:
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas 180745709 Jan 26 11:30 shared/HITS.pool.root.1
[2026-01-26 11:31:29]  *** Contents of shared directory: ***
[2026-01-26 11:31:29] total 664600
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas 498119121 Jan 26 10:16 ATLAS.root_0
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 10:16 start_atlas.sh
[2026-01-26 11:31:29] -rw-r--r-- 2 boincer umatlas    597746 Jan 26 10:16 input.tar.gz
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas 180745709 Jan 26 11:30 HITS.pool.root.1
[2026-01-26 11:31:29] -rw------- 1 boincer umatlas   1054720 Jan 26 11:31 result.tar.gz
11:31:31 (1657): run_atlas exited; CPU time 46605.314819
11:31:31 (1657): called boinc_finish(0)

</stderr_txt>
]]>

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