Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:06 (2090970): wrapper (7.7.26015): starting
12:30:06 (2090970): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 12:30:06] Arguments: --nthreads 8
[2026-01-26 12:30:07] Threads: 8
[2026-01-26 12:30:07] Checking for CVMFS
[2026-01-26 12:30:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:30:10] 2.13.3.0 9860 46279 235880 155555 2 89 30583409 39288833 8132 16776704 0 24755250 99.571 31410627 37059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 12:30:10] CVMFS is ok
[2026-01-26 12:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 12:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 12:30:10] Further information can be found at the LHC@home message board.
[2026-01-26 12:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:30:10] Checking for apptainer binary...
[2026-01-26 12:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:30:10] Running /usr/bin/apptainer --version
[2026-01-26 12:30:10] apptainer version 1.4.5-2.el9
[2026-01-26 12:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:30:11] c-210-21.aglt2.org
[2026-01-26 12:30:11] apptainer works
[2026-01-26 12:30:11] Set ATHENA_PROC_NUMBER=8
[2026-01-26 12:30:11] Set ATHENA_CORE_NUMBER=8
[2026-01-26 12:30:11] Starting ATLAS job with PandaID=6983062254
[2026-01-26 12:30:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:20:04 (2090970): BOINC client no longer exists - exiting
15:20:04 (2090970): timer handler: client dead, exiting
15:55:45 (2412469): wrapper (7.7.26015): starting
15:55:45 (2412469): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 15:55:45] Arguments: --nthreads 8
[2026-01-26 15:55:45] Threads: 8
[2026-01-26 15:55:45] This job has been restarted, cleaning up previous attempt
[2026-01-26 15:55:45] Checking for CVMFS
[2026-01-26 15:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:55:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:55:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:55:48] 2.13.3.0 9860 46484 241032 155561 0 264 30924233 39288832 8132 16776704 0 24857248 99.573 31419436 37058 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 15:55:48] CVMFS is ok
[2026-01-26 15:55:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 15:55:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 15:55:49] Further information can be found at the LHC@home message board.
[2026-01-26 15:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:55:49] Checking for apptainer binary...
[2026-01-26 15:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:55:49] Running /usr/bin/apptainer --version
[2026-01-26 15:55:49] apptainer version 1.4.5-2.el9
[2026-01-26 15:55:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:55:50] c-210-21.aglt2.org
[2026-01-26 15:55:50] apptainer works
[2026-01-26 15:55:50] Set ATHENA_PROC_NUMBER=8
[2026-01-26 15:55:50] Set ATHENA_CORE_NUMBER=8
[2026-01-26 15:55:51] Starting ATLAS job with PandaID=6983062254
[2026-01-26 15:55:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:32:20]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:32:20] 2026-01-27 03:31:52,900 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6983062254/jobReport.json
[2026-01-26 22:32:20] 2026-01-27 03:31:52,903 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-26 22:32:20] 2026-01-27 03:31:52,903 | INFO     | this job has now completed (state=finished)
[2026-01-26 22:32:20] 2026-01-27 03:31:52,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 22:32:20] 2026-01-27 03:31:52,955 | INFO     | log transfer has been attempted: DONE
[2026-01-26 22:32:20] 2026-01-27 03:31:52,955 | INFO     | job 6983062254 has finished - writing final server update
[2026-01-26 22:32:20] 2026-01-27 03:31:52,955 | INFO     | total number of processed events: 400 (read)
[2026-01-26 22:32:20] 2026-01-27 03:31:52,983 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6983062254/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:32:20] 2026-01-27 03:31:52,984 | INFO     | extracted standard info from prmon json
[2026-01-26 22:32:20] 2026-01-27 03:31:52,984 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:32:20] 2026-01-27 03:31:52,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:32:20] 2026-01-27 03:31:52,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:32:20] 2026-01-27 03:31:52,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:32:20] 2026-01-27 03:31:53,027 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:32:20] 2026-01-27 03:31:53,028 | INFO     | sum of square deviations: 18256102308.714603
[2026-01-26 22:32:20] 2026-01-27 03:31:53,047 | INFO     | sum of deviations: 114982053447.83542
[2026-01-26 22:32:20] 2026-01-27 03:31:53,047 | INFO     | mean x: 1769472863.2107968
[2026-01-26 22:32:20] 2026-01-27 03:31:53,047 | INFO     | mean y: 2498651.562982005
[2026-01-26 22:32:20] 2026-01-27 03:31:53,048 | INFO     | intersect: -11142137804.3292
[2026-01-26 22:32:20] 2026-01-27 03:31:53,048 | INFO     | chi2: 3.503641468192951
[2026-01-26 22:32:20] 2026-01-27 03:31:53,049 | INFO     | sum of square deviations: 17561234767.747383
[2026-01-26 22:32:20] 2026-01-27 03:31:53,065 | INFO     | sum of deviations: 137184989837.77072
[2026-01-26 22:32:20] 2026-01-27 03:31:53,078 | INFO     | mean x: 1769472710.7057292
[2026-01-26 22:32:20] 2026-01-27 03:31:53,078 | INFO     | mean y: 2503470.1041666665
[2026-01-26 22:32:20] 2026-01-27 03:31:53,078 | INFO     | intersect: -13820277162.73601
[2026-01-26 22:32:20] 2026-01-27 03:31:53,079 | INFO     | chi2: 2.822644988645455
[2026-01-26 22:32:20] 2026-01-27 03:31:53,079 | INFO     | current chi2=2.822644988645455 (change=19.436819826736688 %)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,079 | INFO     | right removable region: 383
[2026-01-26 22:32:20] 2026-01-27 03:31:53,080 | INFO     | sum of square deviations: 17561183655.184963
[2026-01-26 22:32:20] 2026-01-27 03:31:53,078 | INFO     | monitor loop #1479: job 0:6983062254 is in state 'finished'
[2026-01-26 22:32:20] 2026-01-27 03:31:53,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,092 | INFO     | sum of deviations: 12422082838.359367
[2026-01-26 22:32:20] 2026-01-27 03:31:53,093 | INFO     | mean x: 1769473015.7213542
[2026-01-26 22:32:20] 2026-01-27 03:31:53,093 | INFO     | mean y: 2521117.078125
[2026-01-26 22:32:20] 2026-01-27 03:31:53,093 | INFO     | intersect: -1249133715.142848
[2026-01-26 22:32:20] 2026-01-27 03:31:53,106 | INFO     | chi2: 0.8888096235322531
[2026-01-26 22:32:20] 2026-01-27 03:31:53,106 | INFO     | current chi2=0.8888096235322531 (change=74.63183286300502 %)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,107 | INFO     | sum of square deviations: 16884149105.029078
[2026-01-26 22:32:20] 2026-01-27 03:31:53,123 | INFO     | sum of deviations: -12839057217.303432
[2026-01-26 22:32:20] 2026-01-27 03:31:53,123 | INFO     | mean x: 1769473168.2295516
[2026-01-26 22:32:20] 2026-01-27 03:31:53,123 | INFO     | mean y: 2526794.5092348284
[2026-01-26 22:32:20] 2026-01-27 03:31:53,123 | INFO     | intersect: 1348070896.8540518
[2026-01-26 22:32:20] 2026-01-27 03:31:53,124 | INFO     | chi2: 0.730736404715442
[2026-01-26 22:32:20] 2026-01-27 03:31:53,124 | INFO     | current chi2=0.730736404715442 (change=17.78482305227594 %)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,124 | INFO     | left removable region: 20
[2026-01-26 22:32:20] 2026-01-27 03:31:53,125 | INFO     | sum of square deviations: 14834963513.62541
[2026-01-26 22:32:20] 2026-01-27 03:31:53,140 | INFO     | sum of deviations: 4630284216.027548
[2026-01-26 22:32:20] 2026-01-27 03:31:53,141 | INFO     | mean x: 1769473290.2369146
[2026-01-26 22:32:20] 2026-01-27 03:31:53,141 | INFO     | mean y: 2533469.953168044
[2026-01-26 22:32:20] 2026-01-27 03:31:53,141 | INFO     | intersect: -549753985.215911
[2026-01-26 22:32:20] 2026-01-27 03:31:53,154 | INFO     | chi2: 0.00652286595001108
[2026-01-26 22:32:20] 2026-01-27 03:31:53,154 | INFO     | current memory leak: 0.31 B/s (using 363 data points, chi2=0.01)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | could have reported an average CPU frequency of 2599 MHz (17 samples)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | ..............................
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | . Timing measurements:
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | . get job = 0 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | . initial setup = 3 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | . payload setup = 24 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,155 | INFO     | . stage-in = 0 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,156 | INFO     | . payload execution = 23687 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,156 | INFO     | . stage-out = 2 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,156 | INFO     | . log creation = 0 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,156 | INFO     | ..............................
[2026-01-26 22:32:20] 2026-01-27 03:31:53,384 | INFO     | time since job start (23723s) is within the limit (349056.0s)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,782 | INFO     | 
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | job summary report
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | --------------------------------------------------
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | PanDA job id: 6983062254
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | task id: 48310724
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | errors: (none)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:32:20] 2026-01-27 03:31:53,783 | INFO     | pilot state: finished 
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | transexitcode: 0
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | exeerrorcode: 0
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | exeerrordiag: 
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | exitcode: 0
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | exitmsg: OK
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | cpuconsumptiontime: 46541 s
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | nevents: 400
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | neventsw: 0
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | pid: 2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:53,784 | INFO     | pgrp: 2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | corecount: 8
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | event service: False
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | sizes: {0: 2283822, 1: 2284283, 2: 2284283, 23715: 2319248, 23716: 2319247, 23719: 2328485, 23721: 2328687}
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | --------------------------------------------------
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | 
[2026-01-26 22:32:20] 2026-01-27 03:31:53,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-26 22:32:20] 2026-01-27 03:31:53,828 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,828 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,828 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | job 6983062254 has completed (purged errors)
[2026-01-26 22:32:20] 2026-01-27 03:31:53,830 | INFO     | overall cleanup function is called
[2026-01-26 22:32:20] 2026-01-27 03:31:54,839 | INFO     | --- collectZombieJob: --- 10, [2420614]
[2026-01-26 22:32:20] 2026-01-27 03:31:54,840 | INFO     | zombie collector waiting for pid 2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:54,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:32:20] 2026-01-27 03:31:54,840 | INFO     | collected zombie processes
[2026-01-26 22:32:20] 2026-01-27 03:31:54,840 | INFO     | will attempt to kill all subprocesses of pid=2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:55,980 | INFO     | PID=2417723 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 22:32:20] 2026-01-27 03:31:55,980 | INFO     | .. there are 7 such processes running
[2026-01-26 22:32:20] 2026-01-27 03:31:55,987 | INFO     | process IDs to be killed: [2420614] (in reverse order)
[2026-01-26 22:32:20] 2026-01-27 03:31:56,065 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:32:20] 2026-01-27 03:31:56,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:32:20] 2026-01-27 03:31:56,072 | INFO     | did not find any defunct processes belonging to 2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:56,079 | INFO     | did not find any defunct processes belonging to 2420614
[2026-01-26 22:32:20] 2026-01-27 03:31:56,079 | INFO     | ready for new job
[2026-01-26 22:32:20] 2026-01-27 03:31:56,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:32:20] 2026-01-27 03:31:56,083 | INFO     | **************************************
[2026-01-26 22:32:20] 2026-01-27 03:31:56,083 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:32:20] 2026-01-27 03:31:56,083 | INFO     | **************************************
[2026-01-26 22:32:20] 2026-01-27 03:31:56,083 | INFO     | 
[2026-01-26 22:32:20] 2026-01-27 03:31:56,120 | INFO     | architecture information:
[2026-01-26 22:32:20] 2026-01-27 03:31:56,128 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:32:20] 2026-01-27 03:31:56,169 | INFO     | cat /etc/os-release:
[2026-01-26 22:32:20] NAME="CentOS Linux"
[2026-01-26 22:32:20] VERSION="7 (Core)"
[2026-01-26 22:32:20] ID="centos"
[2026-01-26 22:32:20] ID_LIKE="rhel fedora"
[2026-01-26 22:32:20] VERSION_ID="7"
[2026-01-26 22:32:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:32:20] ANSI_COLOR="0;31"
[2026-01-26 22:32:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:32:20] HOME_URL="https://www.centos.org/"
[2026-01-26 22:32:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:32:20] 
[2026-01-26 22:32:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:32:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:32:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:32:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:32:20] 
[2026-01-26 22:32:20] 2026-01-27 03:31:56,169 | INFO     | **************************************
[2026-01-26 22:32:20] 2026-01-27 03:31:56,673 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-26 22:32:20] 2026-01-27 03:31:56,837 | INFO     | sufficient remaining disk space (51719962624 B)
[2026-01-26 22:32:20] 2026-01-27 03:31:56,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:32:20] 2026-01-27 03:31:56,838 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:32:20] 2026-01-27 03:31:56,838 | INFO     | update_server=False
[2026-01-26 22:32:20] 2026-01-27 03:31:56,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:32:20] 2026-01-27 03:31:56,846 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-26 22:32:20] 2026-01-27 03:31:56,846 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:32:20] 2026-01-27 03:31:56,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:32:20] 2026-01-27 03:31:56,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:32:20] 2026-01-27 03:31:56,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:32:20] 2026-01-27 03:31:56,847 | INFO     | aborting loop
[2026-01-26 22:32:20] 2026-01-27 03:31:56,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:32:20] 2026-01-27 03:31:56,943 | INFO     | all data control threads have been joined
[2026-01-26 22:32:20] 2026-01-27 03:31:57,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:32:20] 2026-01-27 03:31:57,748 | INFO     | all job control threads have been joined
[2026-01-26 22:32:20] 2026-01-27 03:31:57,843 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:57,854 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:57,950 | INFO     | [data] control thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,104 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,111 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,285 | INFO     | all payload control threads have been joined
[2026-01-26 22:32:20] 2026-01-27 03:31:58,309 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,361 | INFO     | [job] validate thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,580 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:32:20] 2026-01-27 03:31:58,755 | INFO     | [job] control thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,864 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:58,898 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:59,007 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:59,291 | INFO     | [payload] control thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:59,377 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:31:59,610 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:32:01,497 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:32:20] 2026-01-27 03:32:13,248 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:32:20] 2026-01-27 03:32:14,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139730539616064)>', '<ExcThread(monitor, started 139730265327360)>']
[2026-01-26 22:32:20] 2026-01-27 03:32:14,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:32:20] 2026-01-27 03:32:14,967 | INFO     | [monitor] control thread has ended
[2026-01-26 22:32:20] 2026-01-27 03:32:19,763 | INFO     | all workflow threads have been joined
[2026-01-26 22:32:20] 2026-01-27 03:32:19,764 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:32:20] 2026-01-27 03:32:19,764 | INFO     | traces error code: 0
[2026-01-26 22:32:20] 2026-01-27 03:32:19,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:32:20] 2026-01-27 03:32:20,616 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:32:20] 2026-01-27 03:32:20,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:32:20] 2026-01-27 03:32:20,623 [wrapper] pilotpid: 2417723
[2026-01-26 22:32:20] 2026-01-27 03:32:20,627 [wrapper] Pilot exit status: 0
[2026-01-26 22:32:20] 2026-01-27 03:32:20,646 [wrapper] pandaids: 6983062254 6983062254
[2026-01-26 22:32:20] 2026-01-27 03:32:20,696 [wrapper] cleanup supervisor_pilot 2957583 2417724
[2026-01-26 22:32:20] 2026-01-27 03:32:20,700 [wrapper] Test setup, not cleaning
[2026-01-26 22:32:20] 2026-01-27 03:32:20,703 [wrapper] apfmon messages muted
[2026-01-26 22:32:20] 2026-01-27 03:32:20,706 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:32:20] 2026-01-27 03:32:20,709 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:32:20]  *** Error codes and diagnostics ***
[2026-01-26 22:32:20]     "exeErrorCode": 0,
[2026-01-26 22:32:20]     "exeErrorDiag": "",
[2026-01-26 22:32:20]     "pilotErrorCode": 0,
[2026-01-26 22:32:20]     "pilotErrorDiag": "",
[2026-01-26 22:32:20]  *** Listing of results directory ***
[2026-01-26 22:32:20] total 1157008
[2026-01-26 22:32:20] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 22:32:20] -rwx------. 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas       100 Jan 26 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:32:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 12:30 run_atlas
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas       105 Jan 26 12:30 job.xml
[2026-01-26 22:32:20] -rw-r--r--. 3 boincer umatlas 495511198 Jan 26 12:30 EVNT.48310721._000204.pool.root.1
[2026-01-26 22:32:20] -rw-r--r--. 3 boincer umatlas 495511198 Jan 26 12:30 ATLAS.root_0
[2026-01-26 22:32:20] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 12:30 start_atlas.sh
[2026-01-26 22:32:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 12:30 shared
[2026-01-26 22:32:20] -rw-r--r--. 2 boincer umatlas    597762 Jan 26 12:30 input.tar.gz
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas         0 Jan 26 12:30 boinc_lockfile
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas      2535 Jan 26 15:55 pandaJob.out
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas        57 Jan 26 15:55 setup.sh.local
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas   1006457 Jan 26 15:56 agis_schedconf.cvmfs.json
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas       434 Jan 26 15:56 workernode_map.json
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas      6661 Jan 26 22:27 init_data.xml
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas 182541849 Jan 26 22:30 HITS.48310724._010178.pool.root.1
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas       531 Jan 26 22:30 boinc_task_state.xml
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas        97 Jan 26 22:31 pilot_heartbeat.json
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas      1049 Jan 26 22:31 memory_monitor_summary.json
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas   1516246 Jan 26 22:31 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas    594145 Jan 26 22:31 log.48310724._010178.job.log.tgz.1
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas      6400 Jan 26 22:31 heartbeat.json
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas        28 Jan 26 22:32 wrapper_checkpoint.txt
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 22:32 boinc_mmap_file
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas      4548 Jan 26 22:32 pilotlog.txt
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas   3037618 Jan 26 22:32 log.48310724._010178.job.log.1
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas       357 Jan 26 22:32 output.list
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas       620 Jan 26 22:32 runtime_log
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas   3645440 Jan 26 22:32 result.tar.gz
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas      9427 Jan 26 22:32 runtime_log.err
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas       785 Jan 26 22:32 l7QMDmv9H48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOs7KDm9B9Xdn.diag
[2026-01-26 22:32:20] -rw-r--r--. 1 boincer umatlas     23659 Jan 26 22:32 stderr.txt
[2026-01-26 22:32:20] HITS file was successfully produced:
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas 182541849 Jan 26 22:30 shared/HITS.pool.root.1
[2026-01-26 22:32:20]  *** Contents of shared directory: ***
[2026-01-26 22:32:20] total 666332
[2026-01-26 22:32:20] -rw-r--r--. 3 boincer umatlas 495511198 Jan 26 12:30 ATLAS.root_0
[2026-01-26 22:32:20] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 12:30 start_atlas.sh
[2026-01-26 22:32:20] -rw-r--r--. 2 boincer umatlas    597762 Jan 26 12:30 input.tar.gz
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas 182541849 Jan 26 22:30 HITS.pool.root.1
[2026-01-26 22:32:20] -rw-------. 1 boincer umatlas   3645440 Jan 26 22:32 result.tar.gz
22:32:42 (2412469): run_atlas exited; CPU time 47049.540250
22:32:42 (2412469): called boinc_finish(0)

</stderr_txt>
]]>

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