Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:24 (12510): wrapper (7.7.26015): starting
10:00:24 (12510): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 10:00:24] Arguments: --nthreads 12
[2026-01-26 10:00:24] Threads: 12
[2026-01-26 10:00:24] Checking for CVMFS
[2026-01-26 10:00:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 10:00:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 10:00:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 10:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 10:00:25] 2.11.2.0 2925 375674 99204 155549 1 50 12681734 20275200 1 130560 1 160338509 99.950 22864512 17003 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 10:00:25] CVMFS is ok
[2026-01-26 10:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 10:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 10:00:25] Further information can be found at the LHC@home message board.
[2026-01-26 10:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 10:00:25] Checking for apptainer binary...
[2026-01-26 10:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 10:00:25] Running /usr/bin/apptainer --version
[2026-01-26 10:00:25] apptainer version 1.3.2-1.el7
[2026-01-26 10:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 10:00:26] c-205-9.aglt2.org
[2026-01-26 10:00:26] apptainer works
[2026-01-26 10:00:26] Set ATHENA_PROC_NUMBER=12
[2026-01-26 10:00:26] Set ATHENA_CORE_NUMBER=12
[2026-01-26 10:00:26] Starting ATLAS job with PandaID=6982977357
[2026-01-26 10:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:28:02]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:28:02]  guid=88e93d4d-9adf-4da7-a8ab-aadb75adda07
[2026-01-26 11:28:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 11:28:02]  is_altstaged=None
[2026-01-26 11:28:02]  is_tar=False
[2026-01-26 11:28:02]  lfn=log.48330013._000148.job.log.tgz.1
[2026-01-26 11:28:02]  mtime=0
[2026-01-26 11:28:02]  protocol_id=None
[2026-01-26 11:28:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 11:28:02]  replicas=None
[2026-01-26 11:28:02]  scope=mc23_13p6TeV
[2026-01-26 11:28:02]  status=None
[2026-01-26 11:28:02]  status_code=0
[2026-01-26 11:28:02]  storage_token=
[2026-01-26 11:28:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6982977357/log.48330013._000148.job.log.tgz.1
[2026-01-26 11:28:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/e0/log.48330013._000148.job.log.tgz.1
[2026-01-26 11:28:02]  workdir=None
[2026-01-26 11:28:02] ]
[2026-01-26 11:28:02] 2026-01-26 16:27:06,988 | INFO     | transferring file log.48330013._000148.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6982977357/log.48330013._000148.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 11:28:02] 2026-01-26 16:27:06,988 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6982977357/log.48330013._000148.job.log.tgz.1 /tmp/boinchome/slots/0/log.48330013._000148.job
[2026-01-26 11:28:02] 2026-01-26 16:27:07,011 | INFO     | adding to output.list: log.48330013._000148.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/e0/log.48330013._000148.job.log.tg
[2026-01-26 11:28:02] 2026-01-26 16:27:07,011 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 11:28:02] 2026-01-26 16:27:07,012 | INFO     | summary of transferred files:
[2026-01-26 11:28:02] 2026-01-26 16:27:07,012 | INFO     |  -- lfn=log.48330013._000148.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 11:28:02] 2026-01-26 16:27:07,012 | INFO     | stage-out finished correctly
[2026-01-26 11:28:02] 2026-01-26 16:27:07,301 | WARNING  | process 20972 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 11:28:02] 2026-01-26 16:27:07,301 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6982977357/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:28:02] 2026-01-26 16:27:07,386 | INFO     | number of running child processes to parent process 20972: 1
[2026-01-26 11:28:02] 2026-01-26 16:27:07,386 | INFO     | maximum number of monitored processes: 6
[2026-01-26 11:28:02] 2026-01-26 16:27:07,621 | INFO     | time since job start (5179s) is within the limit (349056.0s)
[2026-01-26 11:28:02] 2026-01-26 16:27:07,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 11:28:02] 2026-01-26 16:27:08,634 | INFO     | job 6982977357 has state=finished
[2026-01-26 11:28:02] 2026-01-26 16:27:08,635 | INFO     | preparing for final server update for job 6982977357 in state='finished'
[2026-01-26 11:28:02] 2026-01-26 16:27:08,716 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,716 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6982977357/jobReport.json
[2026-01-26 11:28:02] 2026-01-26 16:27:08,718 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 11:28:02] 2026-01-26 16:27:08,718 | INFO     | this job has now completed (state=finished)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,718 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,718 | INFO     | log transfer has been attempted: DONE
[2026-01-26 11:28:02] 2026-01-26 16:27:08,718 | INFO     | job 6982977357 has finished - writing final server update
[2026-01-26 11:28:02] 2026-01-26 16:27:08,719 | INFO     | total number of processed events: 400 (read)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,720 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6982977357/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,721 | INFO     | extracted standard info from prmon json
[2026-01-26 11:28:02] 2026-01-26 16:27:08,721 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:28:02] 2026-01-26 16:27:08,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:28:02] 2026-01-26 16:27:08,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:28:02] 2026-01-26 16:27:08,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:28:02] 2026-01-26 16:27:08,723 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:28:02] 2026-01-26 16:27:08,723 | INFO     | sum of square deviations: 147126479.5
[2026-01-26 11:28:02] 2026-01-26 16:27:08,723 | INFO     | sum of deviations: 832987818.0
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | mean x: 1769442324.5
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | mean y: 2672061.564102564
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | intersect: -10015401544.024366
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | chi2: 0.007051605469344434
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | current memory leak: 5.66 B/s (using 78 data points, chi2=0.01)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,724 | INFO     | could have reported an average CPU frequency of 1806 MHz (6 samples)
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | ..............................
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . Timing measurements:
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . get job = 0 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . initial setup = 7 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . payload setup = 7 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . stage-in = 0 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . payload execution = 5159 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . stage-out = 0 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,725 | INFO     | . log creation = 0 s
[2026-01-26 11:28:02] 2026-01-26 16:27:08,726 | INFO     | ..............................
[2026-01-26 11:28:02] 2026-01-26 16:27:09,204 | INFO     | 
[2026-01-26 11:28:02] 2026-01-26 16:27:09,204 | INFO     | job summary report
[2026-01-26 11:28:02] 2026-01-26 16:27:09,204 | INFO     | --------------------------------------------------
[2026-01-26 11:28:02] 2026-01-26 16:27:09,204 | INFO     | PanDA job id: 6982977357
[2026-01-26 11:28:02] 2026-01-26 16:27:09,204 | INFO     | task id: 48330013
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | errors: (none)
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | pilot state: finished 
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | transexitcode: 0
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | exeerrorcode: 0
[2026-01-26 11:28:02] 2026-01-26 16:27:09,205 | INFO     | exeerrordiag: 
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | exitcode: 0
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | exitmsg: OK
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | cpuconsumptiontime: 56358 s
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | nevents: 400
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | neventsw: 0
[2026-01-26 11:28:02] 2026-01-26 16:27:09,206 | INFO     | pid: 20972
[2026-01-26 11:28:02] 2026-01-26 16:27:09,207 | INFO     | pgrp: 20972
[2026-01-26 11:28:02] 2026-01-26 16:27:09,207 | INFO     | corecount: 12
[2026-01-26 11:28:02] 2026-01-26 16:27:09,207 | INFO     | event service: False
[2026-01-26 11:28:02] 2026-01-26 16:27:09,207 | INFO     | sizes: {0: 2283920, 1: 2284381, 11: 2284381, 5167: 2310715, 5168: 2319713, 5169: 2319769, 5170: 2320091}
[2026-01-26 11:28:02] 2026-01-26 16:27:09,207 | INFO     | --------------------------------------------------
[2026-01-26 11:28:02] 2026-01-26 16:27:09,208 | INFO     | 
[2026-01-26 11:28:02] 2026-01-26 16:27:09,208 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 11:28:02] 2026-01-26 16:27:09,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:28:02] 2026-01-26 16:27:09,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:28:02] 2026-01-26 16:27:09,238 | INFO     | job 6982977357 has completed (purged errors)
[2026-01-26 11:28:02] 2026-01-26 16:27:09,238 | INFO     | overall cleanup function is called
[2026-01-26 11:28:02] 2026-01-26 16:27:10,246 | INFO     | --- collectZombieJob: --- 10, [20972]
[2026-01-26 11:28:02] 2026-01-26 16:27:10,246 | INFO     | zombie collector waiting for pid 20972
[2026-01-26 11:28:02] 2026-01-26 16:27:10,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:28:02] 2026-01-26 16:27:10,247 | INFO     | collected zombie processes
[2026-01-26 11:28:02] 2026-01-26 16:27:10,247 | INFO     | will attempt to kill all subprocesses of pid=20972
[2026-01-26 11:28:02] 2026-01-26 16:27:10,334 | INFO     | process IDs to be killed: [20972] (in reverse order)
[2026-01-26 11:28:02] 2026-01-26 16:27:10,385 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:28:02] 2026-01-26 16:27:10,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:28:02] 2026-01-26 16:27:10,388 | INFO     | did not find any defunct processes belonging to 20972
[2026-01-26 11:28:02] 2026-01-26 16:27:10,390 | INFO     | did not find any defunct processes belonging to 20972
[2026-01-26 11:28:02] 2026-01-26 16:27:10,390 | INFO     | ready for new job
[2026-01-26 11:28:02] 2026-01-26 16:27:10,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:28:02] 2026-01-26 16:27:10,391 | INFO     | **************************************
[2026-01-26 11:28:02] 2026-01-26 16:27:10,391 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:28:02] 2026-01-26 16:27:10,391 | INFO     | **************************************
[2026-01-26 11:28:02] 2026-01-26 16:27:10,391 | INFO     | 
[2026-01-26 11:28:02] 2026-01-26 16:27:10,392 | INFO     | architecture information:
[2026-01-26 11:28:02] 2026-01-26 16:27:10,392 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:28:02] 2026-01-26 16:27:10,408 | INFO     | cat /etc/os-release:
[2026-01-26 11:28:02] NAME="CentOS Linux"
[2026-01-26 11:28:02] VERSION="7 (Core)"
[2026-01-26 11:28:02] ID="centos"
[2026-01-26 11:28:02] ID_LIKE="rhel fedora"
[2026-01-26 11:28:02] VERSION_ID="7"
[2026-01-26 11:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:28:02] ANSI_COLOR="0;31"
[2026-01-26 11:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:28:02] HOME_URL="https://www.centos.org/"
[2026-01-26 11:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:28:02] 
[2026-01-26 11:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:28:02] 
[2026-01-26 11:28:02] 2026-01-26 16:27:10,408 | INFO     | **************************************
[2026-01-26 11:28:02] 2026-01-26 16:27:10,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 11:28:02] 2026-01-26 16:27:10,927 | INFO     | sufficient remaining disk space (29311893504 B)
[2026-01-26 11:28:02] 2026-01-26 16:27:10,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:28:02] 2026-01-26 16:27:10,928 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:28:02] 2026-01-26 16:27:10,928 | INFO     | update_server=False
[2026-01-26 11:28:02] 2026-01-26 16:27:10,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:28:02] 2026-01-26 16:27:10,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:28:02] 2026-01-26 16:27:10,929 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:28:02] 2026-01-26 16:27:10,929 | INFO     | aborting loop
[2026-01-26 11:28:02] 2026-01-26 16:27:11,491 | INFO     | job.realtimelogging is not enabled
[2026-01-26 11:28:02] 2026-01-26 16:27:11,548 | INFO     | all data control threads have been joined
[2026-01-26 11:28:02] 2026-01-26 16:27:11,866 | INFO     | all payload control threads have been joined
[2026-01-26 11:28:02] 2026-01-26 16:27:11,934 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:11,934 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,021 | INFO     | all job control threads have been joined
[2026-01-26 11:28:02] 2026-01-26 16:27:12,070 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,134 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,233 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,323 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,553 | INFO     | [data] control thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,871 | INFO     | [payload] control thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:12,934 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:13,026 | INFO     | [job] control thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:13,063 | INFO     | [job] validate thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:13,204 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:13,340 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:13,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:28:02] 2026-01-26 16:27:13,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:28:02] 2026-01-26 16:27:14,818 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:17,751 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:28:02] 2026-01-26 16:27:40,825 | INFO     | PID=16486 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 11:28:02] 2026-01-26 16:27:40,825 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:28:02] 2026-01-26 16:27:40,825 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:28:02] 2026-01-26 16:27:40,825 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:28:02] 2026-01-26 16:27:55,880 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:28:02] 2026-01-26 16:27:57,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883826857792)>', '<ExcThread(monitor, started 139883226052352)>']
[2026-01-26 11:28:02] 2026-01-26 16:27:57,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:28:02] 2026-01-26 16:27:57,907 | INFO     | [monitor] control thread has ended
[2026-01-26 11:28:02] 2026-01-26 16:28:02,319 | INFO     | all workflow threads have been joined
[2026-01-26 11:28:02] 2026-01-26 16:28:02,320 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:28:02] 2026-01-26 16:28:02,320 | INFO     | traces error code: 0
[2026-01-26 11:28:02] 2026-01-26 16:28:02,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:28:02] 2026-01-26 16:28:02,419 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:28:02] 2026-01-26 16:28:02,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:28:02] 2026-01-26 16:28:02,426 [wrapper] pilotpid: 16486
[2026-01-26 11:28:02] 2026-01-26 16:28:02,430 [wrapper] Pilot exit status: 0
[2026-01-26 11:28:02] 2026-01-26 16:28:02,445 [wrapper] pandaids: 6982977357
[2026-01-26 11:28:02] 2026-01-26 16:28:02,491 [wrapper] cleanup supervisor_pilot 10446 16487
[2026-01-26 11:28:02] 2026-01-26 16:28:02,495 [wrapper] Test setup, not cleaning
[2026-01-26 11:28:02] 2026-01-26 16:28:02,499 [wrapper] apfmon messages muted
[2026-01-26 11:28:02] 2026-01-26 16:28:02,504 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:28:02] 2026-01-26 16:28:02,508 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:28:02]  *** Error codes and diagnostics ***
[2026-01-26 11:28:02]     "exeErrorCode": 0,
[2026-01-26 11:28:02]     "exeErrorDiag": "",
[2026-01-26 11:28:02]     "pilotErrorCode": 0,
[2026-01-26 11:28:02]     "pilotErrorDiag": "",
[2026-01-26 11:28:02]  *** Listing of results directory ***
[2026-01-26 11:28:02] total 412720
[2026-01-26 11:28:02] -rwx------ 1 boincer umatlas     36322 Jan 25 06:28 runpilot2-wrapper.sh
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 06:29 pilot3.tar.gz
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 06:31 queuedata.json
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas       100 Jan 26 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:28:02] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 10:00 run_atlas
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas       105 Jan 26 10:00 job.xml
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas 249799447 Jan 26 10:00 EVNT.48330011._000006.pool.root.1
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 10:00 start_atlas.sh
[2026-01-26 11:28:02] drwxrwx--x 2 boincer umatlas      4096 Jan 26 10:00 shared
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas    597768 Jan 26 10:00 input.tar.gz
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas         0 Jan 26 10:00 boinc_lockfile
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas      2603 Jan 26 10:00 pandaJob.out
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas        57 Jan 26 10:00 setup.sh.local
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas   1002189 Jan 26 10:00 agis_schedconf.cvmfs.json
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas   1516246 Jan 26 10:00 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas       444 Jan 26 10:00 workernode_map.json
[2026-01-26 11:28:02] drwx------ 5 boincer umatlas      4096 Jan 26 10:00 pilot3
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 11:21 init_data.xml
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas 166580535 Jan 26 11:26 HITS.48330013._000148.pool.root.1
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas        95 Jan 26 11:26 pilot_heartbeat.json
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas       529 Jan 26 11:26 boinc_task_state.xml
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas      1045 Jan 26 11:27 memory_monitor_summary.json
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas    407069 Jan 26 11:27 log.48330013._000148.job.log.tgz.1
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas      6408 Jan 26 11:27 heartbeat.json
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas        27 Jan 26 11:27 wrapper_checkpoint.txt
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 11:27 boinc_mmap_file
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas      4814 Jan 26 11:28 pilotlog.txt
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas    745770 Jan 26 11:28 log.48330013._000148.job.log.1
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas       357 Jan 26 11:28 output.list
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas       620 Jan 26 11:28 runtime_log
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas   1167360 Jan 26 11:28 result.tar.gz
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas      9338 Jan 26 11:28 runtime_log.err
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas       658 Jan 26 11:28 NdyNDmiTD48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpp0KDmdqzPMo.diag
[2026-01-26 11:28:02] -rw-r--r-- 1 boincer umatlas     21376 Jan 26 11:28 stderr.txt
[2026-01-26 11:28:02] HITS file was successfully produced:
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas 166580535 Jan 26 11:26 shared/HITS.pool.root.1
[2026-01-26 11:28:02]  *** Contents of shared directory: ***
[2026-01-26 11:28:02] total 408372
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas 249799447 Jan 26 10:00 ATLAS.root_0
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 10:00 start_atlas.sh
[2026-01-26 11:28:02] -rw-r--r-- 2 boincer umatlas    597768 Jan 26 10:00 input.tar.gz
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas 166580535 Jan 26 11:26 HITS.pool.root.1
[2026-01-26 11:28:02] -rw------- 1 boincer umatlas   1167360 Jan 26 11:28 result.tar.gz
11:28:04 (12510): run_atlas exited; CPU time 56336.727583
11:28:04 (12510): called boinc_finish(0)

</stderr_txt>
]]>

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