Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
15:50:04 (822454): wrapper (7.7.26015): starting
15:50:04 (822454): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 15:50:04] Arguments: --nthreads 4
[2026-01-26 15:50:04] Threads: 4
[2026-01-26 15:50:04] Checking for CVMFS
[2026-01-26 15:50:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:50:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:50:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:50:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:50:05] 2.13.1.0 784092 104 49560 155549 3 188 6957763 10240000 911 130560 0 77987 99.994 4161 360 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 15:50:05] CVMFS is ok
[2026-01-26 15:50:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:50:05] Checking for apptainer binary...
[2026-01-26 15:50:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:50:05] Running /usr/bin/apptainer --version
[2026-01-26 15:50:05] apptainer version 1.4.5
[2026-01-26 15:50:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:50:05] peachesvl
[2026-01-26 15:50:05] apptainer works
[2026-01-26 15:50:05] Set ATHENA_PROC_NUMBER=4
[2026-01-26 15:50:05] Set ATHENA_CORE_NUMBER=4
[2026-01-26 15:50:05] Starting ATLAS job with PandaID=6983772079
[2026-01-26 15:50:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 17:22:05]  *** The last 200 lines of the pilot log: ***
[2026-01-26 17:22:05]  lfn=log.48318034._002324.job.log.tgz.1
[2026-01-26 17:22:05]  mtime=0
[2026-01-26 17:22:05]  protocol_id=None
[2026-01-26 17:22:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 17:22:05]  replicas=None
[2026-01-26 17:22:05]  scope=mc23_13p6TeV
[2026-01-26 17:22:05]  status=None
[2026-01-26 17:22:05]  status_code=0
[2026-01-26 17:22:05]  storage_token=
[2026-01-26 17:22:05]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/log.48318034._002324.job.log.tgz.1
[2026-01-26 17:22:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/a9/log.48318034._002324.job.log.tgz.1
[2026-01-26 17:22:05]  workdir=None
[2026-01-26 17:22:05] ]
[2026-01-26 17:22:05] 2026-01-26 16:21:28,968 | INFO     | transferring file log.48318034._002324.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/log.48318034._002324.job.log.tgz.1 to /var/li
[2026-01-26 17:22:05] 2026-01-26 16:21:28,968 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/log.48318034._002324.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-26 17:22:05] 2026-01-26 16:21:29,013 | INFO     | adding to output.list: log.48318034._002324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/a9/log.48318034._002324.job.log.tg
[2026-01-26 17:22:05] 2026-01-26 16:21:29,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 17:22:05] 2026-01-26 16:21:29,016 | INFO     | summary of transferred files:
[2026-01-26 17:22:05] 2026-01-26 16:21:29,016 | INFO     |  -- lfn=log.48318034._002324.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 17:22:05] 2026-01-26 16:21:29,017 | INFO     | stage-out finished correctly
[2026-01-26 17:22:05] 2026-01-26 16:21:29,111 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 17:22:05] 2026-01-26 16:21:29,303 | WARNING  | process 830919 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 17:22:05] 2026-01-26 16:21:29,304 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:22:05] 2026-01-26 16:21:29,365 | INFO     | time since job start (5454s) is within the limit (349056.0s)
[2026-01-26 17:22:05] 2026-01-26 16:21:29,657 | INFO     | number of running child processes to parent process 830919: 1
[2026-01-26 17:22:05] 2026-01-26 16:21:29,658 | INFO     | maximum number of monitored processes: 6
[2026-01-26 17:22:05] 2026-01-26 16:21:31,372 | INFO     | time since job start (5456s) is within the limit (349056.0s)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,526 | INFO     | job 6983772079 has state=finished
[2026-01-26 17:22:05] 2026-01-26 16:21:31,527 | INFO     | preparing for final server update for job 6983772079 in state='finished'
[2026-01-26 17:22:05] 2026-01-26 16:21:31,527 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/jobReport.json
[2026-01-26 17:22:05] 2026-01-26 16:21:31,530 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-01-26 17:22:05] 2026-01-26 16:21:31,530 | INFO     | this job has now completed (state=finished)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,531 | INFO     | log transfer has been attempted: DONE
[2026-01-26 17:22:05] 2026-01-26 16:21:31,531 | INFO     | job 6983772079 has finished - writing final server update
[2026-01-26 17:22:05] 2026-01-26 16:21:31,531 | INFO     | total number of processed events: 400 (read)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,535 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983772079/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,536 | INFO     | extracted standard info from prmon json
[2026-01-26 17:22:05] 2026-01-26 16:21:31,536 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 17:22:05] 2026-01-26 16:21:31,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 17:22:05] 2026-01-26 16:21:31,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 17:22:05] 2026-01-26 16:21:31,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 17:22:05] 2026-01-26 16:21:31,538 | INFO     | fitting pss+swap vs Time
[2026-01-26 17:22:05] 2026-01-26 16:21:31,539 | INFO     | sum of square deviations: 170944600.5
[2026-01-26 17:22:05] 2026-01-26 16:21:31,539 | INFO     | sum of deviations: -2042324682.5
[2026-01-26 17:22:05] 2026-01-26 16:21:31,539 | INFO     | mean x: 1769441843.5
[2026-01-26 17:22:05] 2026-01-26 16:21:31,539 | INFO     | mean y: 2342292.451219512
[2026-01-26 17:22:05] 2026-01-26 16:21:31,539 | INFO     | intersect: 21142376787.008724
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | chi2: 0.02841811968685472
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | current memory leak: -11.95 B/s (using 82 data points, chi2=0.03)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | ..............................
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | . Timing measurements:
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | . get job = 0 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,540 | INFO     | . initial setup = 11 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | . payload setup = 12 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | . stage-in = 0 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | . payload execution = 5424 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | . stage-out = 0 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | . log creation = 0 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,541 | INFO     | ..............................
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | 
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | job summary report
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | --------------------------------------------------
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | PanDA job id: 6983772079
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | task id: 48318034
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | errors: (none)
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | pilot state: finished 
[2026-01-26 17:22:05] 2026-01-26 16:21:31,990 | INFO     | transexitcode: 0
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | exeerrorcode: 0
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | exeerrordiag: 
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | exitcode: 0
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | exitmsg: OK
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | cpuconsumptiontime: 20011 s
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | nevents: 400
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | neventsw: 0
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | pid: 830919
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | pgrp: 830919
[2026-01-26 17:22:05] 2026-01-26 16:21:31,991 | INFO     | corecount: 4
[2026-01-26 17:22:05] 2026-01-26 16:21:31,992 | INFO     | event service: False
[2026-01-26 17:22:05] 2026-01-26 16:21:31,992 | INFO     | sizes: {0: 2283780, 1: 2284241, 11: 2284241, 5441: 2310731, 5443: 2319813, 5445: 2319951}
[2026-01-26 17:22:05] 2026-01-26 16:21:31,992 | INFO     | --------------------------------------------------
[2026-01-26 17:22:05] 2026-01-26 16:21:31,992 | INFO     | 
[2026-01-26 17:22:05] 2026-01-26 16:21:31,992 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 17:22:05] 2026-01-26 16:21:32,038 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 17:22:05] 2026-01-26 16:21:32,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,041 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 17:22:05] 2026-01-26 16:21:32,041 | INFO     | job 6983772079 has completed (purged errors)
[2026-01-26 17:22:05] 2026-01-26 16:21:32,041 | INFO     | overall cleanup function is called
[2026-01-26 17:22:05] 2026-01-26 16:21:33,051 | INFO     | --- collectZombieJob: --- 10, [830919]
[2026-01-26 17:22:05] 2026-01-26 16:21:33,051 | INFO     | zombie collector waiting for pid 830919
[2026-01-26 17:22:05] 2026-01-26 16:21:33,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 17:22:05] 2026-01-26 16:21:33,051 | INFO     | collected zombie processes
[2026-01-26 17:22:05] 2026-01-26 16:21:33,051 | INFO     | will attempt to kill all subprocesses of pid=830919
[2026-01-26 17:22:05] 2026-01-26 16:21:33,413 | INFO     | process IDs to be killed: [830919] (in reverse order)
[2026-01-26 17:22:05] 2026-01-26 16:21:33,587 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 17:22:05] 2026-01-26 16:21:33,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 17:22:05] 2026-01-26 16:21:33,597 | INFO     | did not find any defunct processes belonging to 830919
[2026-01-26 17:22:05] 2026-01-26 16:21:33,605 | INFO     | did not find any defunct processes belonging to 830919
[2026-01-26 17:22:05] 2026-01-26 16:21:33,606 | INFO     | ready for new job
[2026-01-26 17:22:05] 2026-01-26 16:21:33,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 17:22:05] 2026-01-26 16:21:33,610 | INFO     | **************************************
[2026-01-26 17:22:05] 2026-01-26 16:21:33,610 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 17:22:05] 2026-01-26 16:21:33,610 | INFO     | **************************************
[2026-01-26 17:22:05] 2026-01-26 16:21:33,610 | INFO     | 
[2026-01-26 17:22:05] 2026-01-26 16:21:33,611 | INFO     | pilot is running in a VM
[2026-01-26 17:22:05] 2026-01-26 16:21:33,611 | INFO     | architecture information:
[2026-01-26 17:22:05] 2026-01-26 16:21:33,612 | INFO     | executing command: cat /etc/os-release
[2026-01-26 17:22:05] 2026-01-26 16:21:33,646 | INFO     | cat /etc/os-release:
[2026-01-26 17:22:05] NAME="CentOS Linux"
[2026-01-26 17:22:05] VERSION="7 (Core)"
[2026-01-26 17:22:05] ID="centos"
[2026-01-26 17:22:05] ID_LIKE="rhel fedora"
[2026-01-26 17:22:05] VERSION_ID="7"
[2026-01-26 17:22:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 17:22:05] ANSI_COLOR="0;31"
[2026-01-26 17:22:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 17:22:05] HOME_URL="https://www.centos.org/"
[2026-01-26 17:22:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 17:22:05] 
[2026-01-26 17:22:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 17:22:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 17:22:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 17:22:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 17:22:05] 
[2026-01-26 17:22:05] 2026-01-26 16:21:33,647 | INFO     | **************************************
[2026-01-26 17:22:05] 2026-01-26 16:21:34,151 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 17:22:05] 2026-01-26 16:21:34,180 | INFO     | sufficient remaining disk space (58796802048 B)
[2026-01-26 17:22:05] 2026-01-26 16:21:34,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 17:22:05] 2026-01-26 16:21:34,182 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 17:22:05] 2026-01-26 16:21:34,182 | INFO     | update_server=False
[2026-01-26 17:22:05] 2026-01-26 16:21:34,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 17:22:05] 2026-01-26 16:21:34,330 | INFO     | all payload control threads have been joined
[2026-01-26 17:22:05] 2026-01-26 16:21:34,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 17:22:05] 2026-01-26 16:21:34,672 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 17:22:05] 2026-01-26 16:21:34,672 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 17:22:05] 2026-01-26 16:21:34,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:22:05] 2026-01-26 16:21:34,673 | INFO     | will abort loop
[2026-01-26 17:22:05] 2026-01-26 16:21:34,737 | INFO     | all job control threads have been joined
[2026-01-26 17:22:05] 2026-01-26 16:21:34,910 | INFO     | all data control threads have been joined
[2026-01-26 17:22:05] 2026-01-26 16:21:35,188 | INFO     | [job] retrieve thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 17:22:05] 2026-01-26 16:21:35,336 | INFO     | [payload] control thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,357 | INFO     | [payload] validate_post thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,678 | INFO     | [job] job monitor thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,743 | INFO     | [job] control thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,916 | INFO     | [data] control thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,989 | INFO     | [job] validate thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:35,998 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:36,009 | INFO     | [payload] failed_post thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:36,259 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:36,365 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:36,385 | INFO     | [data] copytool_in thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:36,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 17:22:05] 2026-01-26 16:21:36,630 | INFO     | [data] copytool_out thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:37,633 | INFO     | [job] queue monitor thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:39,203 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:42,312 | INFO     | [monitor] cgroup control has ended
[2026-01-26 17:22:05] 2026-01-26 16:21:44,428 | INFO     | job.realtimelogging is not enabled
[2026-01-26 17:22:05] 2026-01-26 16:21:45,434 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 17:22:05] 2026-01-26 16:21:46,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139256899610432)>', '<ExcThread(monitor, started 139255657527040)>']
[2026-01-26 17:22:05] 2026-01-26 16:21:51,102 | INFO     | all workflow threads have been joined
[2026-01-26 17:22:05] 2026-01-26 16:21:51,102 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 17:22:05] 2026-01-26 16:21:51,103 | INFO     | traces error code: 0
[2026-01-26 17:22:05] 2026-01-26 16:21:51,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 17:22:05] 2026-01-26 16:22:04,831 | INFO     | PID=826387 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 17:22:05] 2026-01-26 16:22:04,832 | INFO     | .. there are 3 such processes running
[2026-01-26 17:22:05] 2026-01-26 16:22:04,834 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 17:22:05] 2026-01-26 16:22:04,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 17:22:05] 2026-01-26 16:22:04,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 17:22:05] 2026-01-26 16:22:04,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 17:22:05] 2026-01-26 16:22:04,834 | INFO     | [monitor] control thread has ended
[2026-01-26 17:22:05] 2026-01-26 16:22:05,022 [wrapper] ==== pilot stdout END ====
[2026-01-26 17:22:05] 2026-01-26 16:22:05,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 17:22:05] 2026-01-26 16:22:05,042 [wrapper] pilotpid: 826387
[2026-01-26 17:22:05] 2026-01-26 16:22:05,052 [wrapper] Pilot exit status: 0
[2026-01-26 17:22:05] 2026-01-26 16:22:05,089 [wrapper] pandaids: 6983772079
[2026-01-26 17:22:05] 2026-01-26 16:22:05,208 [wrapper] cleanup supervisor_pilot  858730 826388
[2026-01-26 17:22:05] 2026-01-26 16:22:05,219 [wrapper] Test setup, not cleaning
[2026-01-26 17:22:05] 2026-01-26 16:22:05,229 [wrapper] apfmon messages muted
[2026-01-26 17:22:05] 2026-01-26 16:22:05,239 [wrapper] ==== wrapper stdout END ====
[2026-01-26 17:22:05] 2026-01-26 16:22:05,250 [wrapper] ==== wrapper stderr END ====
[2026-01-26 17:22:05]  *** Error codes and diagnostics ***
[2026-01-26 17:22:05]     "exeErrorCode": 0,
[2026-01-26 17:22:05]     "exeErrorDiag": "",
[2026-01-26 17:22:05]     "pilotErrorCode": 0,
[2026-01-26 17:22:05]     "pilotErrorDiag": "",
[2026-01-26 17:22:05]  *** Listing of results directory ***
[2026-01-26 17:22:05] insgesamt 671472
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-26 17:22:05] -rwx------ 1 yeti boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc       100 Jan 26 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 17:22:05] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 15:50 run_atlas
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc       105 Jan 26 15:50 job.xml
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc     15845 Jan 26 15:50 start_atlas.sh
[2026-01-26 17:22:05] drwxrwx--x 2 yeti boinc      4096 Jan 26 15:50 shared
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc    597758 Jan 26 15:50 input.tar.gz
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc      6558 Jan 26 15:50 init_data.xml
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc 497146286 Jan 26 15:50 EVNT.48318032._000060.pool.root.1
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc         0 Jan 26 15:50 boinc_setup_complete
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc         0 Jan 26 15:50 boinc_lockfile
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc      2532 Jan 26 15:50 pandaJob.out
[2026-01-26 17:22:05] -rw------- 1 yeti boinc        52 Jan 26 15:50 setup.sh.local
[2026-01-26 17:22:05] -rw------- 1 yeti boinc   1002189 Jan 26 15:50 agis_schedconf.cvmfs.json
[2026-01-26 17:22:05] -rw------- 1 yeti boinc   1516246 Jan 26 15:50 agis_ddmendpoints.agis.ALL.json
[2026-01-26 17:22:05] -rw------- 1 yeti boinc       422 Jan 26 15:50 workernode_map.json
[2026-01-26 17:22:05] drwx------ 5 yeti boinc      4096 Jan 26 15:50 pilot3
[2026-01-26 17:22:05] -rw------- 1 yeti boinc 184326035 Jan 26 17:20 HITS.48318034._002324.pool.root.1
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc       531 Jan 26 17:21 boinc_task_state.xml
[2026-01-26 17:22:05] -rw------- 1 yeti boinc      1013 Jan 26 17:21 memory_monitor_summary.json
[2026-01-26 17:22:05] -rw------- 1 yeti boinc    290169 Jan 26 17:21 log.48318034._002324.job.log.tgz.1
[2026-01-26 17:22:05] -rw------- 1 yeti boinc      6274 Jan 26 17:21 heartbeat.json
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc      8192 Jan 26 17:21 boinc_mmap_file
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc        27 Jan 26 17:21 wrapper_checkpoint.txt
[2026-01-26 17:22:05] -rw------- 1 yeti boinc        95 Jan 26 17:22 pilot_heartbeat.json
[2026-01-26 17:22:05] -rw------- 1 yeti boinc       821 Jan 26 17:22 pilotlog.txt
[2026-01-26 17:22:05] -rw------- 1 yeti boinc    802206 Jan 26 17:22 log.48318034._002324.job.log.1
[2026-01-26 17:22:05] -rw------- 1 yeti boinc       357 Jan 26 17:22 output.list
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc       620 Jan 26 17:22 runtime_log
[2026-01-26 17:22:05] -rw------- 1 yeti boinc   1105920 Jan 26 17:22 result.tar.gz
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc      9546 Jan 26 17:22 runtime_log.err
[2026-01-26 17:22:05] -rw------- 1 yeti boinc       639 Jan 26 17:22 hJxMDm7HS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHv8KDm2PkYHo.diag
[2026-01-26 17:22:05] -rw-r--r-- 1 yeti boinc     21355 Jan 26 17:22 stderr.txt
[2026-01-26 17:22:05] HITS file was successfully produced:
[2026-01-26 17:22:05] -rw------- 1 yeti boinc 184326035 Jan 26 17:20 shared/HITS.pool.root.1
[2026-01-26 17:22:05]  *** Contents of shared directory: ***
[2026-01-26 17:22:05] insgesamt 667192
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc     15845 Jan 26 15:50 start_atlas.sh
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc    597758 Jan 26 15:50 input.tar.gz
[2026-01-26 17:22:05] -rw-r--r-- 2 yeti boinc 497146286 Jan 26 15:50 ATLAS.root_0
[2026-01-26 17:22:05] -rw------- 1 yeti boinc 184326035 Jan 26 17:20 HITS.pool.root.1
[2026-01-26 17:22:05] -rw------- 1 yeti boinc   1105920 Jan 26 17:22 result.tar.gz
17:22:07 (822454): run_atlas exited; CPU time 20242.568819
17:22:07 (822454): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN