Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:04:05 (1018428): wrapper (7.7.26015): starting
12:04:05 (1018428): wrapper: running run_atlas (--nthreads 10)
[2026-01-26 12:04:05] Arguments: --nthreads 10
[2026-01-26 12:04:05] Threads: 10
[2026-01-26 12:04:05] Checking for CVMFS
[2026-01-26 12:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 12:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 12:04:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 12:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 12:04:06] 2.13.3.0 11793 118166 362972 155554 3 172 25108990 32935937 26707 16776704 0 440157633 99.533 554180746 35230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 12:04:06] CVMFS is ok
[2026-01-26 12:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 12:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 12:04:06] Further information can be found at the LHC@home message board.
[2026-01-26 12:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 12:04:06] Checking for apptainer binary...
[2026-01-26 12:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 12:04:06] Running /usr/bin/apptainer --version
[2026-01-26 12:04:07] apptainer version 1.4.5-2.el9
[2026-01-26 12:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 12:04:07] c6-2-11-2.aglt2.org
[2026-01-26 12:04:07] apptainer works
[2026-01-26 12:04:07] Set ATHENA_PROC_NUMBER=10
[2026-01-26 12:04:07] Set ATHENA_CORE_NUMBER=10
[2026-01-26 12:04:08] Starting ATLAS job with PandaID=6981241927
[2026-01-26 12:04:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 14:39:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 14:39:28] 2026-01-26 19:38:48,550 | INFO     | chi2: 2.347572888384418
[2026-01-26 14:39:28] 2026-01-26 19:38:48,553 | INFO     | sum of square deviations: 965077093.9178102
[2026-01-26 14:39:28] 2026-01-26 19:38:48,555 | INFO     | sum of deviations: 28722186240.136993
[2026-01-26 14:39:28] 2026-01-26 19:38:48,555 | INFO     | mean x: 1769451550.7123287
[2026-01-26 14:39:28] 2026-01-26 19:38:48,555 | INFO     | mean y: 2576760.979452055
[2026-01-26 14:39:28] 2026-01-26 19:38:48,555 | INFO     | intersect: -52659036806.22325
[2026-01-26 14:39:28] 2026-01-26 19:38:48,556 | INFO     | chi2: 1.5137230123800716
[2026-01-26 14:39:28] 2026-01-26 19:38:48,556 | INFO     | current chi2=1.5137230123800716 (change=35.51965862828633 %)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,557 | INFO     | sum of square deviations: 869290043.6170247
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | sum of deviations: 27600923714.97872
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | mean x: 1769451398.212766
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | mean y: 2574974.234042553
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | intersect: -56179470843.5475
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | chi2: 1.514559259320928
[2026-01-26 14:39:28] 2026-01-26 19:38:48,558 | INFO     | current chi2=1.514559259320928 (change=-0.05524438315446053 %)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,559 | INFO     | right removable region: 140
[2026-01-26 14:39:28] 2026-01-26 19:38:48,559 | INFO     | sum of square deviations: 965075387.0410993
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | sum of deviations: -6278008269.356165
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | mean x: 1769451855.7260275
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | mean y: 2599179.0410958906
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | intersect: 11513237137.11238
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | chi2: 0.8851073467358355
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | current chi2=0.8851073467358355 (change=62.296917334696275 %)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,560 | INFO     | sum of square deviations: 869277479.276595
[2026-01-26 14:39:28] 2026-01-26 19:38:48,565 | INFO     | sum of deviations: -6968625004.723405
[2026-01-26 14:39:28] 2026-01-26 19:38:48,565 | INFO     | mean x: 1769452008.2340426
[2026-01-26 14:39:28] 2026-01-26 19:38:48,566 | INFO     | mean y: 2600217.5673758867
[2026-01-26 14:39:28] 2026-01-26 19:38:48,566 | INFO     | intersect: 14187538632.743216
[2026-01-26 14:39:28] 2026-01-26 19:38:48,566 | INFO     | chi2: 0.8681121693155297
[2026-01-26 14:39:28] 2026-01-26 19:38:48,570 | INFO     | current chi2=0.8681121693155297 (change=1.9201261274106287 %)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,570 | INFO     | left removable region: 20
[2026-01-26 14:39:28] 2026-01-26 19:38:48,570 | INFO     | sum of square deviations: 535846290.9916659
[2026-01-26 14:39:28] 2026-01-26 19:38:48,571 | INFO     | sum of deviations: 2163662885.0499997
[2026-01-26 14:39:28] 2026-01-26 19:38:48,571 | INFO     | mean x: 1769451977.7416666
[2026-01-26 14:39:28] 2026-01-26 19:38:48,571 | INFO     | mean y: 2618075.55
[2026-01-26 14:39:28] 2026-01-26 19:38:48,571 | INFO     | intersect: -7142150182.587495
[2026-01-26 14:39:28] 2026-01-26 19:38:48,572 | INFO     | chi2: 0.00030698822610625114
[2026-01-26 14:39:28] 2026-01-26 19:38:48,572 | INFO     | current memory leak: 4.04 B/s (using 120 data points, chi2=0.00)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,572 | INFO     | could have reported an average CPU frequency of 2704 MHz (9 samples)
[2026-01-26 14:39:28] 2026-01-26 19:38:48,572 | INFO     | ..............................
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . Timing measurements:
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . get job = 0 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . initial setup = 16 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . payload setup = 16 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . stage-in = 0 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . payload execution = 9210 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . stage-out = 1 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | . log creation = 0 s
[2026-01-26 14:39:28] 2026-01-26 19:38:48,573 | INFO     | ..............................
[2026-01-26 14:39:28] 2026-01-26 19:38:49,346 | INFO     | 
[2026-01-26 14:39:28] 2026-01-26 19:38:49,346 | INFO     | job summary report
[2026-01-26 14:39:28] 2026-01-26 19:38:49,346 | INFO     | --------------------------------------------------
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | PanDA job id: 6981241927
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | task id: 48310840
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | errors: (none)
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | pilot state: finished 
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | transexitcode: 0
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | exeerrorcode: 0
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | exeerrordiag: 
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | exitcode: 0
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | exitmsg: OK
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | cpuconsumptiontime: 40091 s
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | nevents: 400
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | neventsw: 0
[2026-01-26 14:39:28] 2026-01-26 19:38:49,347 | INFO     | pid: 1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | pgrp: 1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | corecount: 10
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | event service: False
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | sizes: {0: 2283718, 1: 2284235, 2: 2284263, 9230: 2312424, 9232: 2321478, 9233: 2321680}
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | --------------------------------------------------
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | 
[2026-01-26 14:39:28] 2026-01-26 19:38:49,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 14:39:28] 2026-01-26 19:38:49,369 | INFO     | time since job start (9235s) is within the limit (349056.0s)
[2026-01-26 14:39:28] 2026-01-26 19:38:49,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | job 6981241927 has completed (purged errors)
[2026-01-26 14:39:28] 2026-01-26 19:38:49,435 | INFO     | overall cleanup function is called
[2026-01-26 14:39:28] 2026-01-26 19:38:50,459 | INFO     | --- collectZombieJob: --- 10, [1028833]
[2026-01-26 14:39:28] 2026-01-26 19:38:50,459 | INFO     | zombie collector waiting for pid 1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:50,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 14:39:28] 2026-01-26 19:38:50,460 | INFO     | collected zombie processes
[2026-01-26 14:39:28] 2026-01-26 19:38:50,460 | INFO     | will attempt to kill all subprocesses of pid=1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:53,633 | INFO     | PID=1023807 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 14:39:28] 2026-01-26 19:38:53,633 | INFO     | .. there are 37 such processes running
[2026-01-26 14:39:28] 2026-01-26 19:38:53,691 | INFO     | process IDs to be killed: [1028833] (in reverse order)
[2026-01-26 14:39:28] 2026-01-26 19:38:53,702 | WARNING  | process 1028833 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 14:39:28] 2026-01-26 19:38:54,164 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 14:39:28] 2026-01-26 19:38:54,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 14:39:28] 2026-01-26 19:38:54,214 | INFO     | did not find any defunct processes belonging to 1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:54,291 | INFO     | did not find any defunct processes belonging to 1028833
[2026-01-26 14:39:28] 2026-01-26 19:38:54,291 | INFO     | ready for new job
[2026-01-26 14:39:28] 2026-01-26 19:38:54,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 14:39:28] 2026-01-26 19:38:54,293 | INFO     | **************************************
[2026-01-26 14:39:28] 2026-01-26 19:38:54,293 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 14:39:28] 2026-01-26 19:38:54,293 | INFO     | **************************************
[2026-01-26 14:39:28] 2026-01-26 19:38:54,293 | INFO     | 
[2026-01-26 14:39:28] 2026-01-26 19:38:54,357 | INFO     | architecture information:
[2026-01-26 14:39:28] 2026-01-26 19:38:54,384 | INFO     | executing command: cat /etc/os-release
[2026-01-26 14:39:28] 2026-01-26 19:38:54,486 | INFO     | cat /etc/os-release:
[2026-01-26 14:39:28] NAME="CentOS Linux"
[2026-01-26 14:39:28] VERSION="7 (Core)"
[2026-01-26 14:39:28] ID="centos"
[2026-01-26 14:39:28] ID_LIKE="rhel fedora"
[2026-01-26 14:39:28] VERSION_ID="7"
[2026-01-26 14:39:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 14:39:28] ANSI_COLOR="0;31"
[2026-01-26 14:39:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 14:39:28] HOME_URL="https://www.centos.org/"
[2026-01-26 14:39:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 14:39:28] 
[2026-01-26 14:39:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 14:39:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 14:39:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 14:39:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 14:39:28] 
[2026-01-26 14:39:28] 2026-01-26 19:38:54,487 | INFO     | **************************************
[2026-01-26 14:39:28] 2026-01-26 19:38:54,564 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:39:28] 2026-01-26 19:38:54,565 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 14:39:28] 2026-01-26 19:38:54,567 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 14:39:28] 2026-01-26 19:38:54,567 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 14:39:28] 2026-01-26 19:38:54,567 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6981241927/payload.stdout) since it has not been created yet
[2026-01-26 14:39:28] 2026-01-26 19:38:54,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:39:28] 2026-01-26 19:38:54,705 | INFO     | sufficient remaining disk space (90439680000 B)
[2026-01-26 14:39:28] 2026-01-26 19:38:54,706 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 14:39:28] 2026-01-26 19:38:54,706 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6981241927/HITS.48310840._001202.pool.root.1 since it does not exist
[2026-01-26 14:39:28] 2026-01-26 19:38:55,007 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 14:39:28] 2026-01-26 19:38:55,060 | INFO     | sufficient remaining disk space (90439680000 B)
[2026-01-26 14:39:28] 2026-01-26 19:38:55,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 14:39:28] 2026-01-26 19:38:55,061 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 14:39:28] 2026-01-26 19:38:55,061 | INFO     | update_server=False
[2026-01-26 14:39:28] 2026-01-26 19:38:55,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 14:39:28] 2026-01-26 19:38:55,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 14:39:28] 2026-01-26 19:38:55,324 | INFO     | all data control threads have been joined
[2026-01-26 14:39:28] 2026-01-26 19:38:56,109 | INFO     | [job] retrieve thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:56,149 | INFO     | [payload] failed_post thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:56,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 14:39:28] 2026-01-26 19:38:56,218 | INFO     | number of running child processes to parent process 1028833: 1
[2026-01-26 14:39:28] 2026-01-26 19:38:56,227 | INFO     | maximum number of monitored processes: 6
[2026-01-26 14:39:28] 2026-01-26 19:38:56,227 | INFO     | aborting job monitoring since job object (job id=6981241927) has expired
[2026-01-26 14:39:28] 2026-01-26 19:38:56,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:39:28] 2026-01-26 19:38:56,228 | INFO     | will abort loop
[2026-01-26 14:39:28] 2026-01-26 19:38:56,331 | INFO     | [data] control thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:56,427 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:56,499 | INFO     | all payload control threads have been joined
[2026-01-26 14:39:28] 2026-01-26 19:38:56,626 | INFO     | all job control threads have been joined
[2026-01-26 14:39:28] 2026-01-26 19:38:56,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:56,893 | INFO     | [payload] validate_post thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,083 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,233 | INFO     | [job] job monitor thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,293 | INFO     | [data] copytool_in thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,330 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,424 | INFO     | [job] validate thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,512 | INFO     | [payload] control thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,632 | INFO     | [job] control thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:57,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 14:39:28] 2026-01-26 19:38:58,208 | INFO     | [data] copytool_out thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:58,950 | INFO     | [job] queue monitor thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:38:59,092 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 14:39:28] 2026-01-26 19:39:09,743 | INFO     | [monitor] cgroup control has ended
[2026-01-26 14:39:28] 2026-01-26 19:39:09,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633856145216)>', '<ExcThread(monitor, started 139633513969408)>']
[2026-01-26 14:39:28] 2026-01-26 19:39:14,932 | INFO     | all workflow threads have been joined
[2026-01-26 14:39:28] 2026-01-26 19:39:14,932 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 14:39:28] 2026-01-26 19:39:14,933 | INFO     | traces error code: 0
[2026-01-26 14:39:28] 2026-01-26 19:39:14,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 14:39:28] 2026-01-26 19:39:26,746 | INFO     | PID=1023807 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 14:39:28] 2026-01-26 19:39:26,748 | INFO     | .. there are 37 such processes running
[2026-01-26 14:39:28] 2026-01-26 19:39:26,749 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 14:39:28] 2026-01-26 19:39:26,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 14:39:28] 2026-01-26 19:39:26,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 14:39:28] 2026-01-26 19:39:26,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 14:39:28] 2026-01-26 19:39:26,749 | INFO     | [monitor] control thread has ended
[2026-01-26 14:39:28] 2026-01-26 19:39:27,058 [wrapper] ==== pilot stdout END ====
[2026-01-26 14:39:28] 2026-01-26 19:39:27,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 14:39:28] 2026-01-26 19:39:27,086 [wrapper] pilotpid: 1023807
[2026-01-26 14:39:28] 2026-01-26 19:39:27,175 [wrapper] Pilot exit status: 0
[2026-01-26 14:39:28] 2026-01-26 19:39:27,272 [wrapper] pandaids: 6981241927
[2026-01-26 14:39:28] 2026-01-26 19:39:27,500 [wrapper] cleanup supervisor_pilot 1857414 1023808
[2026-01-26 14:39:28] 2026-01-26 19:39:27,513 [wrapper] Test setup, not cleaning
[2026-01-26 14:39:28] 2026-01-26 19:39:27,527 [wrapper] apfmon messages muted
[2026-01-26 14:39:28] 2026-01-26 19:39:27,537 [wrapper] ==== wrapper stdout END ====
[2026-01-26 14:39:28] 2026-01-26 19:39:27,568 [wrapper] ==== wrapper stderr END ====
[2026-01-26 14:39:28]  *** Error codes and diagnostics ***
[2026-01-26 14:39:28]     "exeErrorCode": 0,
[2026-01-26 14:39:28]     "exeErrorDiag": "",
[2026-01-26 14:39:28]     "pilotErrorCode": 0,
[2026-01-26 14:39:28]     "pilotErrorDiag": "",
[2026-01-26 14:39:28]  *** Listing of results directory ***
[2026-01-26 14:39:28] total 715860
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 11:59 pilot3.tar.gz
[2026-01-26 14:39:28] -rwx------. 1 boincer umatlas     36322 Jan 24 12:00 runpilot2-wrapper.sh
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 12:00 queuedata.json
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas       100 Jan 26 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 14:39:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 12:04 run_atlas
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas       105 Jan 26 12:04 job.xml
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas 530267261 Jan 26 12:04 EVNT.48310836._000027.pool.root.1
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 12:04 start_atlas.sh
[2026-01-26 14:39:28] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 12:04 shared
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas    597752 Jan 26 12:04 input.tar.gz
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas         0 Jan 26 12:04 boinc_lockfile
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas      2499 Jan 26 12:04 pandaJob.out
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas        57 Jan 26 12:04 setup.sh.local
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas   1006276 Jan 26 12:04 agis_schedconf.cvmfs.json
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas   1516246 Jan 26 12:04 agis_ddmendpoints.agis.ALL.json
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas       442 Jan 26 12:04 workernode_map.json
[2026-01-26 14:39:28] drwx------. 5 boincer umatlas      4096 Jan 26 12:04 pilot3
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas 195632178 Jan 26 14:37 HITS.48310840._001202.pool.root.1
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas       530 Jan 26 14:37 boinc_task_state.xml
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas        95 Jan 26 14:38 pilot_heartbeat.json
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas      1043 Jan 26 14:38 memory_monitor_summary.json
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas    403681 Jan 26 14:38 log.48310840._001202.job.log.tgz.1
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas      6381 Jan 26 14:38 heartbeat.json
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas      6877 Jan 26 14:38 init_data.xml
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas        27 Jan 26 14:39 wrapper_checkpoint.txt
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas       823 Jan 26 14:39 pilotlog.txt
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas   1197136 Jan 26 14:39 log.48310840._001202.job.log.1
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas       357 Jan 26 14:39 output.list
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas       620 Jan 26 14:39 runtime_log
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas   1617920 Jan 26 14:39 result.tar.gz
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 14:39 boinc_mmap_file
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas      9348 Jan 26 14:39 runtime_log.err
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas       654 Jan 26 14:39 D0fNDmkAw38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrsyKDm9h74Wo.diag
[2026-01-26 14:39:28] -rw-r--r--. 1 boincer umatlas     21673 Jan 26 14:39 stderr.txt
[2026-01-26 14:39:28] HITS file was successfully produced:
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas 195632178 Jan 26 14:37 shared/HITS.pool.root.1
[2026-01-26 14:39:28]  *** Contents of shared directory: ***
[2026-01-26 14:39:28] total 711076
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas 530267261 Jan 26 12:04 ATLAS.root_0
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 12:04 start_atlas.sh
[2026-01-26 14:39:28] -rw-r--r--. 2 boincer umatlas    597752 Jan 26 12:04 input.tar.gz
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas 195632178 Jan 26 14:37 HITS.pool.root.1
[2026-01-26 14:39:28] -rw-------. 1 boincer umatlas   1617920 Jan 26 14:39 result.tar.gz
14:39:49 (1018428): run_atlas exited; CPU time 40521.108243
14:39:49 (1018428): called boinc_finish(0)

</stderr_txt>
]]>

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