Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:30 (2377): wrapper (7.7.26015): starting
21:43:30 (2377): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 21:43:30] Arguments: --nthreads 8
[2026-01-26 21:43:30] Threads: 8
[2026-01-26 21:43:30] Checking for CVMFS
[2026-01-26 21:43:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:43:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:43:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:43:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:43:31] 2.11.2.0 24514 60391 134572 155561 0 130 20452178 25165825 758 130560 0 25349260 99.821 16670977 3298 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-26 21:43:31] CVMFS is ok
[2026-01-26 21:43:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:43:31] Checking for apptainer binary...
[2026-01-26 21:43:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:43:31] Running /usr/bin/apptainer --version
[2026-01-26 21:43:31] apptainer version 1.3.2-1.el7
[2026-01-26 21:43:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:43:32] cg-vwn473.simple-grid.lan
[2026-01-26 21:43:32] apptainer works
[2026-01-26 21:43:32] Set ATHENA_PROC_NUMBER=8
[2026-01-26 21:43:32] Set ATHENA_CORE_NUMBER=8
[2026-01-26 21:43:32] Starting ATLAS job with PandaID=6983449094
[2026-01-26 21:43:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 02:25:36]  *** The last 200 lines of the pilot log: ***
[2026-01-27 02:25:36] 2026-01-27 01:24:38,959 | INFO     | total number of processed events: 400 (read)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,961 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6983449094/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,962 | INFO     | extracted standard info from prmon json
[2026-01-27 02:25:36] 2026-01-27 01:24:38,962 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 02:25:36] 2026-01-27 01:24:38,962 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 02:25:36] 2026-01-27 01:24:38,962 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 02:25:36] 2026-01-27 01:24:38,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 02:25:36] 2026-01-27 01:24:38,968 | INFO     | fitting pss+swap vs Time
[2026-01-27 02:25:36] 2026-01-27 01:24:38,969 | INFO     | sum of square deviations: 6519285025.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,972 | INFO     | sum of deviations: -11663808109.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,972 | INFO     | mean x: 1769468651.5
[2026-01-27 02:25:36] 2026-01-27 01:24:38,972 | INFO     | mean y: 2498542.3695652173
[2026-01-27 02:25:36] 2026-01-27 01:24:38,972 | INFO     | intersect: 3168297050.463939
[2026-01-27 02:25:36] 2026-01-27 01:24:38,972 | INFO     | chi2: 2.4122583186764013
[2026-01-27 02:25:36] 2026-01-27 01:24:38,973 | INFO     | sum of square deviations: 6171352920.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,976 | INFO     | sum of deviations: 6884823682.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,976 | INFO     | mean x: 1769468499.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,976 | INFO     | mean y: 2506554.3874538746
[2026-01-27 02:25:36] 2026-01-27 01:24:38,976 | INFO     | intersect: -1971530384.4152932
[2026-01-27 02:25:36] 2026-01-27 01:24:38,976 | INFO     | chi2: 1.6390378227225482
[2026-01-27 02:25:36] 2026-01-27 01:24:38,977 | INFO     | current chi2=1.6390378227225482 (change=32.05380161682339 %)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,977 | INFO     | sum of square deviations: 5836025702.5
[2026-01-27 02:25:36] 2026-01-27 01:24:38,979 | INFO     | sum of deviations: 6798047613.499998
[2026-01-27 02:25:36] 2026-01-27 01:24:38,980 | INFO     | mean x: 1769468346.5
[2026-01-27 02:25:36] 2026-01-27 01:24:38,980 | INFO     | mean y: 2506514.7932330826
[2026-01-27 02:25:36] 2026-01-27 01:24:38,980 | INFO     | intersect: -2058644460.7645397
[2026-01-27 02:25:36] 2026-01-27 01:24:38,980 | INFO     | chi2: 1.639332151172451
[2026-01-27 02:25:36] 2026-01-27 01:24:38,980 | INFO     | current chi2=1.639332151172451 (change=-0.01795739218598073 %)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,981 | INFO     | right removable region: 265
[2026-01-27 02:25:36] 2026-01-27 01:24:38,981 | INFO     | sum of square deviations: 6171352920.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,983 | INFO     | sum of deviations: -53001613998.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,984 | INFO     | mean x: 1769468804.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,984 | INFO     | mean y: 2516504.2804428046
[2026-01-27 02:25:36] 2026-01-27 01:24:38,984 | INFO     | intersect: 15199298109.036036
[2026-01-27 02:25:36] 2026-01-27 01:24:38,984 | INFO     | chi2: 0.9711902012061305
[2026-01-27 02:25:36] 2026-01-27 01:24:38,985 | INFO     | current chi2=0.9711902012061305 (change=59.7393780887024 %)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,985 | INFO     | sum of square deviations: 5836025702.5
[2026-01-27 02:25:36] 2026-01-27 01:24:38,987 | INFO     | sum of deviations: -52656633927.00001
[2026-01-27 02:25:36] 2026-01-27 01:24:38,988 | INFO     | mean x: 1769468956.5
[2026-01-27 02:25:36] 2026-01-27 01:24:38,988 | INFO     | mean y: 2516323.902255639
[2026-01-27 02:25:36] 2026-01-27 01:24:38,988 | INFO     | intersect: 15967881083.638971
[2026-01-27 02:25:36] 2026-01-27 01:24:38,988 | INFO     | chi2: 0.9552918465499636
[2026-01-27 02:25:36] 2026-01-27 01:24:38,989 | INFO     | current chi2=0.9552918465499636 (change=1.6369970204006008 %)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,989 | INFO     | left removable region: 20
[2026-01-27 02:25:36] 2026-01-27 01:24:38,989 | INFO     | sum of square deviations: 4560048290.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,991 | INFO     | sum of deviations: -17076440101.000004
[2026-01-27 02:25:36] 2026-01-27 01:24:38,991 | INFO     | mean x: 1769468926.0
[2026-01-27 02:25:36] 2026-01-27 01:24:38,991 | INFO     | mean y: 2516848.404081633
[2026-01-27 02:25:36] 2026-01-27 01:24:38,992 | INFO     | intersect: 6628812932.084329
[2026-01-27 02:25:36] 2026-01-27 01:24:38,992 | INFO     | chi2: 0.11913946620315426
[2026-01-27 02:25:36] 2026-01-27 01:24:38,992 | INFO     | current memory leak: -3.74 B/s (using 245 data points, chi2=0.12)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | could have reported an average CPU frequency of 2249 MHz (13 samples)
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | ..............................
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | . Timing measurements:
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | . get job = 0 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | . initial setup = 7 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,993 | INFO     | . payload setup = 8 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,994 | INFO     | . stage-in = 0 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,994 | INFO     | . payload execution = 16807 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,994 | INFO     | . stage-out = 5 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,994 | INFO     | . log creation = 1 s
[2026-01-27 02:25:36] 2026-01-27 01:24:38,994 | INFO     | ..............................
[2026-01-27 02:25:36] 2026-01-27 01:24:39,107 | INFO     | 
[2026-01-27 02:25:36] 2026-01-27 01:24:39,107 | INFO     | job summary report
[2026-01-27 02:25:36] 2026-01-27 01:24:39,107 | INFO     | --------------------------------------------------
[2026-01-27 02:25:36] 2026-01-27 01:24:39,107 | INFO     | PanDA job id: 6983449094
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | task id: 48298567
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | errors: (none)
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | pilot state: finished 
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | transexitcode: 0
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | exeerrorcode: 0
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | exeerrordiag: 
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | exitcode: 0
[2026-01-27 02:25:36] 2026-01-27 01:24:39,108 | INFO     | exitmsg: OK
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | cpuconsumptiontime: 63701 s
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | nevents: 400
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | neventsw: 0
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | pid: 10664
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | pgrp: 10664
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | corecount: 8
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | event service: False
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | sizes: {0: 2284158, 1: 2284392, 11: 2284392, 16820: 2316264, 16821: 2316263, 16828: 2325319, 16832: 2325697}
[2026-01-27 02:25:36] 2026-01-27 01:24:39,109 | INFO     | --------------------------------------------------
[2026-01-27 02:25:36] 2026-01-27 01:24:39,110 | INFO     | 
[2026-01-27 02:25:36] 2026-01-27 01:24:39,110 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-27 02:25:36] 2026-01-27 01:24:39,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,138 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,138 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 02:25:36] 2026-01-27 01:24:39,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,141 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 02:25:36] 2026-01-27 01:24:39,141 | INFO     | job 6983449094 has completed (purged errors)
[2026-01-27 02:25:36] 2026-01-27 01:24:39,141 | INFO     | overall cleanup function is called
[2026-01-27 02:25:36] 2026-01-27 01:24:40,149 | INFO     | --- collectZombieJob: --- 10, [10664]
[2026-01-27 02:25:36] 2026-01-27 01:24:40,149 | INFO     | zombie collector waiting for pid 10664
[2026-01-27 02:25:36] 2026-01-27 01:24:40,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 02:25:36] 2026-01-27 01:24:40,150 | INFO     | collected zombie processes
[2026-01-27 02:25:36] 2026-01-27 01:24:40,150 | INFO     | will attempt to kill all subprocesses of pid=10664
[2026-01-27 02:25:36] 2026-01-27 01:24:40,223 | INFO     | process IDs to be killed: [10664] (in reverse order)
[2026-01-27 02:25:36] 2026-01-27 01:24:41,037 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 02:25:36] 2026-01-27 01:24:41,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 02:25:36] 2026-01-27 01:24:41,039 | INFO     | did not find any defunct processes belonging to 10664
[2026-01-27 02:25:36] 2026-01-27 01:24:41,054 | INFO     | did not find any defunct processes belonging to 10664
[2026-01-27 02:25:36] 2026-01-27 01:24:41,054 | INFO     | ready for new job
[2026-01-27 02:25:36] 2026-01-27 01:24:41,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 02:25:36] 2026-01-27 01:24:41,056 | INFO     | **************************************
[2026-01-27 02:25:36] 2026-01-27 01:24:41,056 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 02:25:36] 2026-01-27 01:24:41,057 | INFO     | **************************************
[2026-01-27 02:25:36] 2026-01-27 01:24:41,057 | INFO     | 
[2026-01-27 02:25:36] 2026-01-27 01:24:41,057 | INFO     | pilot is running in a VM
[2026-01-27 02:25:36] 2026-01-27 01:24:41,057 | INFO     | architecture information:
[2026-01-27 02:25:36] 2026-01-27 01:24:41,065 | INFO     | executing command: cat /etc/os-release
[2026-01-27 02:25:36] 2026-01-27 01:24:41,366 | INFO     | cat /etc/os-release:
[2026-01-27 02:25:36] NAME="CentOS Linux"
[2026-01-27 02:25:36] VERSION="7 (Core)"
[2026-01-27 02:25:36] ID="centos"
[2026-01-27 02:25:36] ID_LIKE="rhel fedora"
[2026-01-27 02:25:36] VERSION_ID="7"
[2026-01-27 02:25:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 02:25:36] ANSI_COLOR="0;31"
[2026-01-27 02:25:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 02:25:36] HOME_URL="https://www.centos.org/"
[2026-01-27 02:25:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 02:25:36] 
[2026-01-27 02:25:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 02:25:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 02:25:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 02:25:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 02:25:36] 
[2026-01-27 02:25:36] 2026-01-27 01:24:41,366 | INFO     | **************************************
[2026-01-27 02:25:36] 2026-01-27 01:24:41,870 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-27 02:25:36] 2026-01-27 01:24:42,128 | INFO     | sufficient remaining disk space (495518220288 B)
[2026-01-27 02:25:36] 2026-01-27 01:24:42,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 02:25:36] 2026-01-27 01:24:42,128 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 02:25:36] 2026-01-27 01:24:42,129 | INFO     | update_server=False
[2026-01-27 02:25:36] 2026-01-27 01:24:42,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 02:25:36] 2026-01-27 01:24:42,168 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 02:25:36] 2026-01-27 01:24:42,168 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 02:25:36] 2026-01-27 01:24:42,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:25:36] 2026-01-27 01:24:42,169 | INFO     | will abort loop
[2026-01-27 02:25:36] 2026-01-27 01:24:42,506 | INFO     | all job control threads have been joined
[2026-01-27 02:25:36] 2026-01-27 01:24:43,076 | INFO     | all data control threads have been joined
[2026-01-27 02:25:36] 2026-01-27 01:24:43,134 | INFO     | [job] retrieve thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,142 | INFO     | [data] copytool_in thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,174 | INFO     | [job] job monitor thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,504 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,512 | INFO     | [job] control thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,567 | INFO     | all payload control threads have been joined
[2026-01-27 02:25:36] 2026-01-27 01:24:43,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 02:25:36] 2026-01-27 01:24:43,893 | INFO     | [job] validate thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,894 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:43,949 | INFO     | [payload] validate_post thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,082 | INFO     | [data] control thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 02:25:36] 2026-01-27 01:24:44,135 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,573 | INFO     | [payload] control thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,608 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,640 | INFO     | [payload] failed_post thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:44,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 02:25:36] 2026-01-27 01:24:45,130 | INFO     | [job] queue monitor thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:45,633 | INFO     | [data] copytool_out thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:24:48,975 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 02:25:36] 2026-01-27 01:25:11,059 | INFO     | PID=6245 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 02:25:36] 2026-01-27 01:25:11,059 | INFO     | .. there are 2 such processes running
[2026-01-27 02:25:36] 2026-01-27 01:25:11,060 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 02:25:36] 2026-01-27 01:25:11,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 02:25:36] 2026-01-27 01:25:11,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 02:25:36] 2026-01-27 01:25:24,912 | INFO     | [monitor] cgroup control has ended
[2026-01-27 02:25:36] 2026-01-27 01:25:25,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726881310528)>', '<ExcThread(monitor, started 139726048700160)>']
[2026-01-27 02:25:36] 2026-01-27 01:25:26,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 02:25:36] 2026-01-27 01:25:26,149 | INFO     | [monitor] control thread has ended
[2026-01-27 02:25:36] 2026-01-27 01:25:30,920 | INFO     | all workflow threads have been joined
[2026-01-27 02:25:36] 2026-01-27 01:25:30,920 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 02:25:36] 2026-01-27 01:25:30,921 | INFO     | traces error code: 0
[2026-01-27 02:25:36] 2026-01-27 01:25:30,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 02:25:36] 2026-01-27 01:25:31,301 [wrapper] ==== pilot stdout END ====
[2026-01-27 02:25:36] 2026-01-27 01:25:31,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 02:25:36] 2026-01-27 01:25:31,321 [wrapper] pilotpid: 6245
[2026-01-27 02:25:36] 2026-01-27 01:25:31,324 [wrapper] Pilot exit status: 0
[2026-01-27 02:25:36] 2026-01-27 01:25:31,797 [wrapper] pandaids: 6983449094
[2026-01-27 02:25:36] 2026-01-27 01:25:32,845 [wrapper] cleanup supervisor_pilot 17908 6246
[2026-01-27 02:25:36] 2026-01-27 01:25:32,950 [wrapper] Test setup, not cleaning
[2026-01-27 02:25:36] 2026-01-27 01:25:33,037 [wrapper] apfmon messages muted
[2026-01-27 02:25:36] 2026-01-27 01:25:33,111 [wrapper] ==== wrapper stdout END ====
[2026-01-27 02:25:36] 2026-01-27 01:25:33,180 [wrapper] ==== wrapper stderr END ====
[2026-01-27 02:25:36]  *** Error codes and diagnostics ***
[2026-01-27 02:25:36]     "exeErrorCode": 0,
[2026-01-27 02:25:36]     "exeErrorDiag": "",
[2026-01-27 02:25:36]     "pilotErrorCode": 0,
[2026-01-27 02:25:36]     "pilotErrorDiag": "",
[2026-01-27 02:25:36]  *** Listing of results directory ***
[2026-01-27 02:25:36] total 412840
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc    584422 Jan 25 21:48 pilot3.tar.gz
[2026-01-27 02:25:36] -rwx------. 1 boinc boinc     36322 Jan 25 21:51 runpilot2-wrapper.sh
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc      5111 Jan 25 21:54 queuedata.json
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc       100 Jan 26 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 02:25:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan 26 21:43 run_atlas
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc       105 Jan 26 21:43 job.xml
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc      6392 Jan 26 21:43 init_data.xml
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc 249586896 Jan 26 21:43 EVNT.48298565._000009.pool.root.1
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc     15845 Jan 26 21:43 start_atlas.sh
[2026-01-27 02:25:36] drwxrwx--x. 2 boinc boinc        68 Jan 26 21:43 shared
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc    597774 Jan 26 21:43 input.tar.gz
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc         0 Jan 26 21:43 boinc_lockfile
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc      2613 Jan 26 21:43 pandaJob.out
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc   1006457 Jan 26 21:43 agis_schedconf.cvmfs.json
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc       415 Jan 26 21:43 workernode_map.json
[2026-01-27 02:25:36] drwx------. 5 boinc boinc      4096 Jan 26 21:43 pilot3
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc 163538370 Jan 27 02:23 HITS.48298567._000206.pool.root.1
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc       530 Jan 27 02:23 boinc_task_state.xml
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc      1019 Jan 27 02:24 memory_monitor_summary.json
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc   1516246 Jan 27 02:24 agis_ddmendpoints.agis.ALL.json
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc        95 Jan 27 02:24 pilot_heartbeat.json
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc    490019 Jan 27 02:24 log.48298567._000206.job.log.tgz.1
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc      6307 Jan 27 02:24 heartbeat.json
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc        28 Jan 27 02:25 wrapper_checkpoint.txt
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc      8192 Jan 27 02:25 boinc_mmap_file
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc      5066 Jan 27 02:25 pilotlog.txt
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc   2358272 Jan 27 02:25 log.48298567._000206.job.log.1
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc       357 Jan 27 02:25 output.list
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc       620 Jan 27 02:25 runtime_log
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc   2867200 Jan 27 02:25 result.tar.gz
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc      8832 Jan 27 02:25 runtime_log.err
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc       655 Jan 27 02:25 rPlNDmHGM48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbO8KDmNQentm.diag
[2026-01-27 02:25:36] -rw-r--r--. 1 boinc boinc     20708 Jan 27 02:25 stderr.txt
[2026-01-27 02:25:36] HITS file was successfully produced:
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc 163538370 Jan 27 02:23 shared/HITS.pool.root.1
[2026-01-27 02:25:36]  *** Contents of shared directory: ***
[2026-01-27 02:25:36] total 406848
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc 249586896 Jan 26 21:43 ATLAS.root_0
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc     15845 Jan 26 21:43 start_atlas.sh
[2026-01-27 02:25:36] -rw-r--r--. 2 boinc boinc    597774 Jan 26 21:43 input.tar.gz
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc 163538370 Jan 27 02:23 HITS.pool.root.1
[2026-01-27 02:25:36] -rw-------. 1 boinc boinc   2867200 Jan 27 02:25 result.tar.gz
02:25:37 (2377): run_atlas exited; CPU time 63871.874472
02:25:37 (2377): called boinc_finish(0)

</stderr_txt>
]]>

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