Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:27:11 (1673232): wrapper (7.7.26015): starting
01:27:11 (1673232): wrapper: running run_atlas (--nthreads 2)
[2026-01-27 01:27:11] Arguments: --nthreads 2
[2026-01-27 01:27:11] Threads: 2
[2026-01-27 01:27:11] Checking for CVMFS
[2026-01-27 01:27:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:27:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:27:11] 2.9.2.0 765468 9166 67048 155567 3 50 28705407 36864001 0 130560 0 2752786 99.980 299945 7286 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 01:27:11] CVMFS is ok
[2026-01-27 01:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:27:11] Further information can be found at the LHC@home message board.
[2026-01-27 01:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:27:11] Checking for apptainer binary...
[2026-01-27 01:27:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:27:11] Running /usr/bin/apptainer --version
[2026-01-27 01:27:11] apptainer version 1.4.1-1.1
[2026-01-27 01:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:27:11] magicA244
[2026-01-27 01:27:11] apptainer works
[2026-01-27 01:27:11] Set ATHENA_PROC_NUMBER=2
[2026-01-27 01:27:11] Set ATHENA_CORE_NUMBER=2
[2026-01-27 01:27:11] Starting ATLAS job with PandaID=6983771872
[2026-01-27 01:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 03:39:51]  *** The last 200 lines of the pilot log: ***
[2026-01-27 03:39:51] 2026-01-27 02:39:03,149 | INFO     | did not find any defunct processes belonging to 1681662
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | did not find any defunct processes belonging to 1681662
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | ready for new job
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | **************************************
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | **************************************
[2026-01-27 03:39:51] 2026-01-27 02:39:03,150 | INFO     | 
[2026-01-27 03:39:51] 2026-01-27 02:39:03,151 | INFO     | architecture information:
[2026-01-27 03:39:51] 2026-01-27 02:39:03,151 | INFO     | executing command: cat /etc/os-release
[2026-01-27 03:39:51] 2026-01-27 02:39:03,159 | INFO     | cat /etc/os-release:
[2026-01-27 03:39:51] NAME="CentOS Linux"
[2026-01-27 03:39:51] VERSION="7 (Core)"
[2026-01-27 03:39:51] ID="centos"
[2026-01-27 03:39:51] ID_LIKE="rhel fedora"
[2026-01-27 03:39:51] VERSION_ID="7"
[2026-01-27 03:39:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 03:39:51] ANSI_COLOR="0;31"
[2026-01-27 03:39:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 03:39:51] HOME_URL="https://www.centos.org/"
[2026-01-27 03:39:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 03:39:51] 
[2026-01-27 03:39:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 03:39:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 03:39:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 03:39:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 03:39:51] 
[2026-01-27 03:39:51] 2026-01-27 02:39:03,159 | INFO     | **************************************
[2026-01-27 03:39:51] 2026-01-27 02:39:03,663 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 03:39:51] 2026-01-27 02:39:03,674 | INFO     | sufficient remaining disk space (493567868928 B)
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | INFO     | update_server=False
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:39:51] 2026-01-27 02:39:03,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 03:39:51] 2026-01-27 02:39:03,786 | INFO     | job.realtimelogging is not enabled
[2026-01-27 03:39:51] 2026-01-27 02:39:04,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 03:39:51] 2026-01-27 02:39:04,253 | INFO     | aborting loop
[2026-01-27 03:39:51] 2026-01-27 02:39:04,297 | INFO     | all data control threads have been joined
[2026-01-27 03:39:51] 2026-01-27 02:39:04,516 | INFO     | all job control threads have been joined
[2026-01-27 03:39:51] 2026-01-27 02:39:04,680 | INFO     | [job] retrieve thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:04,681 | INFO     | [job] queue monitor thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:04,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:04,865 | INFO     | [payload] validate_post thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,115 | INFO     | all payload control threads have been joined
[2026-01-27 03:39:51] 2026-01-27 02:39:05,259 | INFO     | [job] job monitor thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,302 | INFO     | [data] control thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,496 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,522 | INFO     | [job] control thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,666 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,680 | INFO     | [data] copytool_out thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,701 | INFO     | [data] copytool_in thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,702 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,816 | INFO     | [job] validate thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:05,947 | INFO     | [payload] failed_post thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:06,121 | INFO     | [payload] control thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:06,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 03:39:51] 2026-01-27 02:39:10,406 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 03:39:51] 2026-01-27 02:39:33,276 | INFO     | PID=1677253 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 03:39:51] 2026-01-27 02:39:33,277 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 03:39:51] 2026-01-27 02:39:33,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 03:39:51] 2026-01-27 02:39:33,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 03:39:51] 2026-01-27 02:39:45,028 | INFO     | [monitor] cgroup control has ended
[2026-01-27 03:39:51] 2026-01-27 02:39:46,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403138545472)>', '<ExcThread(monitor, started 140402178897664)>']
[2026-01-27 03:39:51] 2026-01-27 02:39:46,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 03:39:51] 2026-01-27 02:39:46,346 | INFO     | [monitor] control thread has ended
[2026-01-27 03:39:51] 2026-01-27 02:39:51,325 | INFO     | all workflow threads have been joined
[2026-01-27 03:39:51] 2026-01-27 02:39:51,325 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 03:39:51] 2026-01-27 02:39:51,325 | INFO     | traces error code: 0
[2026-01-27 03:39:51] 2026-01-27 02:39:51,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 03:39:51] 2026-01-27 02:39:51,370 [wrapper] ==== pilot stdout END ====
[2026-01-27 03:39:51] 2026-01-27 02:39:51,372 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 03:39:51] 2026-01-27 02:39:51,375 [wrapper] pilotpid: 1677253
[2026-01-27 03:39:51] 2026-01-27 02:39:51,377 [wrapper] Pilot exit status: 0
[2026-01-27 03:39:51] 2026-01-27 02:39:51,382 [wrapper] pandaids: 6983771872
[2026-01-27 03:39:51] 2026-01-27 02:39:51,394 [wrapper] cleanup supervisor_pilot 1686561 1677254
[2026-01-27 03:39:51] 2026-01-27 02:39:51,396 [wrapper] Test setup, not cleaning
[2026-01-27 03:39:51] 2026-01-27 02:39:51,398 [wrapper] apfmon messages muted
[2026-01-27 03:39:51] 2026-01-27 02:39:51,400 [wrapper] ==== wrapper stdout END ====
[2026-01-27 03:39:51] 2026-01-27 02:39:51,402 [wrapper] ==== wrapper stderr END ====
[2026-01-27 03:39:51]  *** Error codes and diagnostics ***
[2026-01-27 03:39:51]     "exeErrorCode": 0,
[2026-01-27 03:39:51]     "exeErrorDiag": "",
[2026-01-27 03:39:51]     "pilotErrorCode": 0,
[2026-01-27 03:39:51]     "pilotErrorDiag": "",
[2026-01-27 03:39:51]  *** Listing of results directory ***
[2026-01-27 03:39:51] total 672124
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-27 03:39:51] -rwx------ 1 boinc boinc     36322 Jan 26 04:19 runpilot2-wrapper.sh
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:21 queuedata.json
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 03:39:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:27 run_atlas
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:27 job.xml
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc 494712647 Jan 27 01:27 EVNT.48318040._000034.pool.root.1
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc    597768 Jan 27 01:27 input.tar.gz
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:27 start_atlas.sh
[2026-01-27 03:39:51] drwxrwx--x 2 boinc boinc      4096 Jan 27 01:27 shared
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:27 boinc_setup_complete
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      6209 Jan 27 01:27 init_data.xml
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc         0 Jan 27 01:27 boinc_lockfile
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      2533 Jan 27 01:27 pandaJob.out
[2026-01-27 03:39:51] -rw------- 1 boinc boinc   1006441 Jan 27 01:27 agis_schedconf.cvmfs.json
[2026-01-27 03:39:51] -rw------- 1 boinc boinc   1516246 Jan 27 01:27 agis_ddmendpoints.agis.ALL.json
[2026-01-27 03:39:51] -rw------- 1 boinc boinc       421 Jan 27 01:27 workernode_map.json
[2026-01-27 03:39:51] drwx------ 5 boinc boinc      4096 Jan 27 01:27 pilot3
[2026-01-27 03:39:51] -rw------- 1 boinc boinc 186754864 Jan 27 03:38 HITS.48318042._001692.pool.root.1
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc       530 Jan 27 03:38 boinc_task_state.xml
[2026-01-27 03:39:51] -rw------- 1 boinc boinc      1016 Jan 27 03:38 memory_monitor_summary.json
[2026-01-27 03:39:51] -rw------- 1 boinc boinc    297935 Jan 27 03:39 log.48318042._001692.job.log.tgz.1
[2026-01-27 03:39:51] -rw------- 1 boinc boinc      6304 Jan 27 03:39 heartbeat.json
[2026-01-27 03:39:51] -rw------- 1 boinc boinc        95 Jan 27 03:39 pilot_heartbeat.json
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      8192 Jan 27 03:39 boinc_mmap_file
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc        27 Jan 27 03:39 wrapper_checkpoint.txt
[2026-01-27 03:39:51] -rw------- 1 boinc boinc      4820 Jan 27 03:39 pilotlog.txt
[2026-01-27 03:39:51] -rw------- 1 boinc boinc   1130914 Jan 27 03:39 log.48318042._001692.job.log.1
[2026-01-27 03:39:51] -rw------- 1 boinc boinc       357 Jan 27 03:39 output.list
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc       620 Jan 27 03:39 runtime_log
[2026-01-27 03:39:51] -rw------- 1 boinc boinc   1443840 Jan 27 03:39 result.tar.gz
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      8911 Jan 27 03:39 runtime_log.err
[2026-01-27 03:39:51] -rw------- 1 boinc boinc       660 Jan 27 03:39 nhHLDm2JS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVR2KDm9oUxXm.diag
[2026-01-27 03:39:51] -rw-r--r-- 1 boinc boinc      9848 Jan 27 03:39 stderr.txt
[2026-01-27 03:39:51] HITS file was successfully produced:
[2026-01-27 03:39:51] -rw------- 1 boinc boinc 186754864 Jan 27 03:38 shared/HITS.pool.root.1
[2026-01-27 03:39:51]  *** Contents of shared directory: ***
[2026-01-27 03:39:51] total 667520
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc 494712647 Jan 27 01:27 ATLAS.root_0
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc    597768 Jan 27 01:27 input.tar.gz
[2026-01-27 03:39:51] -rw-r--r-- 2 boinc boinc     15845 Jan 27 01:27 start_atlas.sh
[2026-01-27 03:39:51] -rw------- 1 boinc boinc 186754864 Jan 27 03:38 HITS.pool.root.1
[2026-01-27 03:39:51] -rw------- 1 boinc boinc   1443840 Jan 27 03:39 result.tar.gz
03:40:14 (1673232): run_atlas exited; CPU time 15395.277997
03:40:14 (1673232): called boinc_finish(0)

</stderr_txt>
]]>

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