Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:05:56 (15109): wrapper (7.7.26015): starting
09:05:56 (15109): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 09:05:56] Arguments: --nthreads 8
[2026-01-26 09:05:56] Threads: 8
[2026-01-26 09:05:56] Checking for CVMFS
[2026-01-26 09:05:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:05:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:05:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:05:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:05:57] 2.11.2.0 2804 128027 92320 155548 3 51 17578100 20275201 1 130560 0 27472685 99.746 9787364 31174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 09:05:57] CVMFS is ok
[2026-01-26 09:05:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:05:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 09:05:57] Further information can be found at the LHC@home message board.
[2026-01-26 09:05:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:05:57] Checking for apptainer binary...
[2026-01-26 09:05:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:05:57] Running /usr/bin/apptainer --version
[2026-01-26 09:05:57] apptainer version 1.3.2-1.el7
[2026-01-26 09:05:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:05:59] c-204-3.aglt2.org
[2026-01-26 09:05:59] apptainer works
[2026-01-26 09:05:59] Set ATHENA_PROC_NUMBER=8
[2026-01-26 09:05:59] Set ATHENA_CORE_NUMBER=8
[2026-01-26 09:05:59] Starting ATLAS job with PandaID=6983449568
[2026-01-26 09:05:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 11:42:44]  *** The last 200 lines of the pilot log: ***
[2026-01-26 11:42:44] 2026-01-26 16:41:40,338 | INFO     | extracted standard info from prmon json
[2026-01-26 11:42:44] 2026-01-26 16:41:40,338 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 11:42:44] 2026-01-26 16:41:40,339 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 11:42:44] 2026-01-26 16:41:40,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 11:42:44] 2026-01-26 16:41:40,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 11:42:44] 2026-01-26 16:41:40,342 | INFO     | fitting pss+swap vs Time
[2026-01-26 11:42:44] 2026-01-26 16:41:40,342 | INFO     | sum of square deviations: 1110539892.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,343 | INFO     | sum of deviations: 17249244500.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,343 | INFO     | mean x: 1769441046.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,343 | INFO     | mean y: 2482135.2418300654
[2026-01-26 11:42:44] 2026-01-26 16:41:40,343 | INFO     | intersect: -27481016161.989758
[2026-01-26 11:42:44] 2026-01-26 16:41:40,343 | INFO     | chi2: 2.105437707261139
[2026-01-26 11:42:44] 2026-01-26 16:41:40,344 | INFO     | sum of square deviations: 1005179777.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,344 | INFO     | sum of deviations: 26538526196.5
[2026-01-26 11:42:44] 2026-01-26 16:41:40,344 | INFO     | mean x: 1769440893.5
[2026-01-26 11:42:44] 2026-01-26 16:41:40,345 | INFO     | mean y: 2495188.222972973
[2026-01-26 11:42:44] 2026-01-26 16:41:40,345 | INFO     | intersect: -46713877922.12474
[2026-01-26 11:42:44] 2026-01-26 16:41:40,345 | INFO     | chi2: 1.327703452903729
[2026-01-26 11:42:44] 2026-01-26 16:41:40,345 | INFO     | current chi2=1.327703452903729 (change=36.939314408362456 %)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,345 | INFO     | sum of square deviations: 906703512.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,346 | INFO     | sum of deviations: 25434732569.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,346 | INFO     | mean x: 1769440741.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,346 | INFO     | mean y: 2493478.6363636362
[2026-01-26 11:42:44] 2026-01-26 16:41:40,347 | INFO     | intersect: -49633635033.489876
[2026-01-26 11:42:44] 2026-01-26 16:41:40,347 | INFO     | chi2: 1.3283125070336912
[2026-01-26 11:42:44] 2026-01-26 16:41:40,347 | INFO     | current chi2=1.3283125070336912 (change=-0.04587275333434808 %)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,347 | INFO     | right removable region: 142
[2026-01-26 11:42:44] 2026-01-26 16:41:40,347 | INFO     | sum of square deviations: 1005179777.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,348 | INFO     | sum of deviations: -4033766123.500001
[2026-01-26 11:42:44] 2026-01-26 16:41:40,348 | INFO     | mean x: 1769441198.5
[2026-01-26 11:42:44] 2026-01-26 16:41:40,348 | INFO     | mean y: 2512440.1013513515
[2026-01-26 11:42:44] 2026-01-26 16:41:40,349 | INFO     | intersect: 7103244197.097833
[2026-01-26 11:42:44] 2026-01-26 16:41:40,349 | INFO     | chi2: 0.8061748814808666
[2026-01-26 11:42:44] 2026-01-26 16:41:40,349 | INFO     | current chi2=0.8061748814808666 (change=61.70986780085839 %)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,349 | INFO     | sum of square deviations: 906703512.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,350 | INFO     | sum of deviations: -5857356335.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,350 | INFO     | mean x: 1769441351.0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,350 | INFO     | mean y: 2515260.3286713287
[2026-01-26 11:42:44] 2026-01-26 16:41:40,350 | INFO     | intersect: 11433207178.384027
[2026-01-26 11:42:44] 2026-01-26 16:41:40,351 | INFO     | chi2: 0.8017728205707436
[2026-01-26 11:42:44] 2026-01-26 16:41:40,351 | INFO     | current chi2=0.8017728205707436 (change=0.5460429258273087 %)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,351 | INFO     | left removable region: 20
[2026-01-26 11:42:44] 2026-01-26 16:41:40,351 | INFO     | sum of square deviations: 563026370.5
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | sum of deviations: 2092467627.9999998
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | mean x: 1769441320.5
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | mean y: 2532099.2786885244
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | intersect: -6573534097.236741
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | chi2: 0.00020985500600716113
[2026-01-26 11:42:44] 2026-01-26 16:41:40,352 | INFO     | current memory leak: 3.72 B/s (using 122 data points, chi2=0.00)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | could have reported an average CPU frequency of 1812 MHz (9 samples)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | ..............................
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | . Timing measurements:
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | . get job = 0 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | . initial setup = 8 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,353 | INFO     | . payload setup = 8 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,354 | INFO     | . stage-in = 0 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,354 | INFO     | . payload execution = 9288 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,354 | INFO     | . stage-out = 0 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,354 | INFO     | . log creation = 0 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,354 | INFO     | ..............................
[2026-01-26 11:42:44] 2026-01-26 16:41:40,436 | INFO     | 
[2026-01-26 11:42:44] 2026-01-26 16:41:40,437 | INFO     | job summary report
[2026-01-26 11:42:44] 2026-01-26 16:41:40,437 | INFO     | --------------------------------------------------
[2026-01-26 11:42:44] 2026-01-26 16:41:40,437 | INFO     | PanDA job id: 6983449568
[2026-01-26 11:42:44] 2026-01-26 16:41:40,437 | INFO     | task id: 48329421
[2026-01-26 11:42:44] 2026-01-26 16:41:40,437 | INFO     | errors: (none)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 11:42:44] 2026-01-26 16:41:40,438 | INFO     | pilot state: finished 
[2026-01-26 11:42:44] 2026-01-26 16:41:40,438 | INFO     | transexitcode: 0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,438 | INFO     | exeerrorcode: 0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,438 | INFO     | exeerrordiag: 
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | exitcode: 0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | exitmsg: OK
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | cpuconsumptiontime: 69945 s
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | nevents: 400
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | neventsw: 0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,439 | INFO     | pid: 23306
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | pgrp: 23306
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | corecount: 8
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | event service: False
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | sizes: {0: 2284148, 1: 2284382, 11: 2284382, 9301: 2312731, 9302: 2321729, 9305: 2321785, 9306: 2322171}
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | --------------------------------------------------
[2026-01-26 11:42:44] 2026-01-26 16:41:40,440 | INFO     | 
[2026-01-26 11:42:44] 2026-01-26 16:41:40,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 11:42:44] 2026-01-26 16:41:40,470 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,470 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,474 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 11:42:44] 2026-01-26 16:41:40,474 | INFO     | job 6983449568 has completed (purged errors)
[2026-01-26 11:42:44] 2026-01-26 16:41:40,474 | INFO     | overall cleanup function is called
[2026-01-26 11:42:44] 2026-01-26 16:41:41,481 | INFO     | --- collectZombieJob: --- 10, [23306]
[2026-01-26 11:42:44] 2026-01-26 16:41:41,482 | INFO     | zombie collector waiting for pid 23306
[2026-01-26 11:42:44] 2026-01-26 16:41:41,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 11:42:44] 2026-01-26 16:41:41,482 | INFO     | collected zombie processes
[2026-01-26 11:42:44] 2026-01-26 16:41:41,483 | INFO     | will attempt to kill all subprocesses of pid=23306
[2026-01-26 11:42:44] 2026-01-26 16:41:41,497 | WARNING  | process 23306 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 11:42:44] 2026-01-26 16:41:41,667 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 11:42:44] 2026-01-26 16:41:41,677 | INFO     | process IDs to be killed: [23306] (in reverse order)
[2026-01-26 11:42:44] 2026-01-26 16:41:41,735 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 11:42:44] 2026-01-26 16:41:41,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 11:42:44] 2026-01-26 16:41:41,743 | INFO     | did not find any defunct processes belonging to 23306
[2026-01-26 11:42:44] 2026-01-26 16:41:41,750 | INFO     | did not find any defunct processes belonging to 23306
[2026-01-26 11:42:44] 2026-01-26 16:41:41,750 | INFO     | ready for new job
[2026-01-26 11:42:44] 2026-01-26 16:41:41,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 11:42:44] 2026-01-26 16:41:41,752 | INFO     | **************************************
[2026-01-26 11:42:44] 2026-01-26 16:41:41,753 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 11:42:44] 2026-01-26 16:41:41,753 | INFO     | **************************************
[2026-01-26 11:42:44] 2026-01-26 16:41:41,753 | INFO     | 
[2026-01-26 11:42:44] 2026-01-26 16:41:41,754 | INFO     | architecture information:
[2026-01-26 11:42:44] 2026-01-26 16:41:41,754 | INFO     | executing command: cat /etc/os-release
[2026-01-26 11:42:44] 2026-01-26 16:41:41,773 | INFO     | cat /etc/os-release:
[2026-01-26 11:42:44] NAME="CentOS Linux"
[2026-01-26 11:42:44] VERSION="7 (Core)"
[2026-01-26 11:42:44] ID="centos"
[2026-01-26 11:42:44] ID_LIKE="rhel fedora"
[2026-01-26 11:42:44] VERSION_ID="7"
[2026-01-26 11:42:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 11:42:44] ANSI_COLOR="0;31"
[2026-01-26 11:42:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 11:42:44] HOME_URL="https://www.centos.org/"
[2026-01-26 11:42:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 11:42:44] 
[2026-01-26 11:42:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 11:42:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 11:42:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 11:42:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 11:42:44] 
[2026-01-26 11:42:44] 2026-01-26 16:41:41,773 | INFO     | **************************************
[2026-01-26 11:42:44] 2026-01-26 16:41:41,786 | INFO     | number of running child processes to parent process 23306: 1
[2026-01-26 11:42:44] 2026-01-26 16:41:41,786 | INFO     | maximum number of monitored processes: 6
[2026-01-26 11:42:44] 2026-01-26 16:41:41,786 | INFO     | aborting job monitoring since job object (job id=6983449568) has expired
[2026-01-26 11:42:44] 2026-01-26 16:41:42,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 11:42:44] 2026-01-26 16:41:42,296 | INFO     | sufficient remaining disk space (18476957696 B)
[2026-01-26 11:42:44] 2026-01-26 16:41:42,297 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 11:42:44] 2026-01-26 16:41:42,297 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 11:42:44] 2026-01-26 16:41:42,297 | INFO     | update_server=False
[2026-01-26 11:42:44] 2026-01-26 16:41:42,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 11:42:44] 2026-01-26 16:41:42,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:42:44] 2026-01-26 16:41:42,298 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 11:42:44] 2026-01-26 16:41:42,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 11:42:44] 2026-01-26 16:41:42,299 | INFO     | will abort loop
[2026-01-26 11:42:44] 2026-01-26 16:41:42,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 11:42:44] 2026-01-26 16:41:42,984 | INFO     | all job control threads have been joined
[2026-01-26 11:42:44] 2026-01-26 16:41:43,102 | INFO     | all data control threads have been joined
[2026-01-26 11:42:44] 2026-01-26 16:41:43,300 | INFO     | [job] retrieve thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:43,301 | INFO     | [job] queue monitor thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:43,304 | INFO     | [job] job monitor thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:43,636 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:43,653 | INFO     | [data] copytool_in thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:43,787 | INFO     | all payload control threads have been joined
[2026-01-26 11:42:44] 2026-01-26 16:41:43,990 | INFO     | [job] control thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,108 | INFO     | [data] control thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,158 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,244 | INFO     | [payload] failed_post thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,298 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,300 | INFO     | [job] validate thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,774 | INFO     | [data] copytool_out thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,792 | INFO     | [payload] control thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:44,805 | INFO     | [payload] validate_post thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:46,300 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:41:53,166 | INFO     | job.realtimelogging is not enabled
[2026-01-26 11:42:44] 2026-01-26 16:41:54,172 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 11:42:44] 2026-01-26 16:42:12,248 | INFO     | PID=18840 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 11:42:44] 2026-01-26 16:42:12,248 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 11:42:44] 2026-01-26 16:42:12,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 11:42:44] 2026-01-26 16:42:12,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 11:42:44] 2026-01-26 16:42:38,325 | INFO     | [monitor] cgroup control has ended
[2026-01-26 11:42:44] 2026-01-26 16:42:39,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307597875008)>', '<ExcThread(monitor, started 140306573944576)>']
[2026-01-26 11:42:44] 2026-01-26 16:42:39,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 11:42:44] 2026-01-26 16:42:39,373 | INFO     | [monitor] control thread has ended
[2026-01-26 11:42:44] 2026-01-26 16:42:44,323 | INFO     | all workflow threads have been joined
[2026-01-26 11:42:44] 2026-01-26 16:42:44,324 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 11:42:44] 2026-01-26 16:42:44,324 | INFO     | traces error code: 0
[2026-01-26 11:42:44] 2026-01-26 16:42:44,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 11:42:44] 2026-01-26 16:42:44,439 [wrapper] ==== pilot stdout END ====
[2026-01-26 11:42:44] 2026-01-26 16:42:44,444 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 11:42:44] 2026-01-26 16:42:44,449 [wrapper] pilotpid: 18840
[2026-01-26 11:42:44] 2026-01-26 16:42:44,454 [wrapper] Pilot exit status: 0
[2026-01-26 11:42:44] 2026-01-26 16:42:44,472 [wrapper] pandaids: 6983449568
[2026-01-26 11:42:44] 2026-01-26 16:42:44,527 [wrapper] cleanup supervisor_pilot 18943 18841
[2026-01-26 11:42:44] 2026-01-26 16:42:44,532 [wrapper] Test setup, not cleaning
[2026-01-26 11:42:44] 2026-01-26 16:42:44,537 [wrapper] apfmon messages muted
[2026-01-26 11:42:44] 2026-01-26 16:42:44,541 [wrapper] ==== wrapper stdout END ====
[2026-01-26 11:42:44] 2026-01-26 16:42:44,546 [wrapper] ==== wrapper stderr END ====
[2026-01-26 11:42:44]  *** Error codes and diagnostics ***
[2026-01-26 11:42:44]     "exeErrorCode": 0,
[2026-01-26 11:42:44]     "exeErrorDiag": "",
[2026-01-26 11:42:44]     "pilotErrorCode": 0,
[2026-01-26 11:42:44]     "pilotErrorDiag": "",
[2026-01-26 11:42:44]  *** Listing of results directory ***
[2026-01-26 11:42:44] total 452552
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-26 11:42:44] -rwx------ 1 boincer umatlas     36322 Jan 25 15:49 runpilot2-wrapper.sh
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:51 queuedata.json
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas       100 Jan 26 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 11:42:44] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 09:05 run_atlas
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas       105 Jan 26 09:05 job.xml
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas 269240639 Jan 26 09:05 EVNT.48329419._000002.pool.root.1
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 09:05 start_atlas.sh
[2026-01-26 11:42:44] drwxrwx--x 2 boincer umatlas      4096 Jan 26 09:05 shared
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas    597776 Jan 26 09:05 input.tar.gz
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas         0 Jan 26 09:05 boinc_lockfile
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas      2606 Jan 26 09:05 pandaJob.out
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas        57 Jan 26 09:06 setup.sh.local
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas   1002197 Jan 26 09:06 agis_schedconf.cvmfs.json
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas   1516246 Jan 26 09:06 agis_ddmendpoints.agis.ALL.json
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas       432 Jan 26 09:06 workernode_map.json
[2026-01-26 11:42:44] drwx------ 5 boincer umatlas      4096 Jan 26 09:06 pilot3
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas      5909 Jan 26 11:37 init_data.xml
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas 186806511 Jan 26 11:41 HITS.48329421._000045.pool.root.1
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas       529 Jan 26 11:41 boinc_task_state.xml
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas        95 Jan 26 11:41 pilot_heartbeat.json
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas      1049 Jan 26 11:41 memory_monitor_summary.json
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas    400573 Jan 26 11:41 log.48329421._000045.job.log.tgz.1
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas      6386 Jan 26 11:41 heartbeat.json
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas        27 Jan 26 11:42 wrapper_checkpoint.txt
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 11:42 boinc_mmap_file
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas      5102 Jan 26 11:42 pilotlog.txt
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas   1308710 Jan 26 11:42 log.48329421._000045.job.log.1
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas       357 Jan 26 11:42 output.list
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas       620 Jan 26 11:42 runtime_log
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas   1730560 Jan 26 11:42 result.tar.gz
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas      9336 Jan 26 11:42 runtime_log.err
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas       659 Jan 26 11:42 5RiMDmKEM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpn1KDmWnHJ0m.diag
[2026-01-26 11:42:44] -rw-r--r-- 1 boincer umatlas     21031 Jan 26 11:42 stderr.txt
[2026-01-26 11:42:44] HITS file was successfully produced:
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas 186806511 Jan 26 11:41 shared/HITS.pool.root.1
[2026-01-26 11:42:44]  *** Contents of shared directory: ***
[2026-01-26 11:42:44] total 447664
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas 269240639 Jan 26 09:05 ATLAS.root_0
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 09:05 start_atlas.sh
[2026-01-26 11:42:44] -rw-r--r-- 2 boincer umatlas    597776 Jan 26 09:05 input.tar.gz
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas 186806511 Jan 26 11:41 HITS.pool.root.1
[2026-01-26 11:42:44] -rw------- 1 boincer umatlas   1730560 Jan 26 11:42 result.tar.gz
11:42:45 (15109): run_atlas exited; CPU time 69911.999406
11:42:45 (15109): called boinc_finish(0)

</stderr_txt>
]]>

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