Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:50:20 (31945): wrapper (7.7.26015): starting
00:50:20 (31945): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 00:50:20] Arguments: --nthreads 8
[2026-01-27 00:50:20] Threads: 8
[2026-01-27 00:50:20] Checking for CVMFS
[2026-01-27 00:50:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:50:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:50:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:50:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:50:23] 2.11.2.0 28804 40817 104704 155566 1 53 24802378 25165824 899 130560 0 6933569 99.822 5228333 2620 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 00:50:23] CVMFS is ok
[2026-01-27 00:50:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:50:23] Checking for apptainer binary...
[2026-01-27 00:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:50:24] Running /usr/bin/apptainer --version
[2026-01-27 00:50:24] apptainer version 1.3.2-1.el7
[2026-01-27 00:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:50:41] cg-vwn362.simple-grid.lan
[2026-01-27 00:50:41] apptainer works
[2026-01-27 00:50:41] Set ATHENA_PROC_NUMBER=8
[2026-01-27 00:50:41] Set ATHENA_CORE_NUMBER=8
[2026-01-27 00:50:41] Starting ATLAS job with PandaID=6982919865
[2026-01-27 00:50:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 05:06:53]  *** The last 200 lines of the pilot log: ***
[2026-01-27 05:06:53] 2026-01-27 04:05:53,125 | INFO     | job 6982919865 has finished - writing final server update
[2026-01-27 05:06:53] 2026-01-27 04:05:53,125 | INFO     | total number of processed events: 400 (read)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,127 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6982919865/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,128 | INFO     | extracted standard info from prmon json
[2026-01-27 05:06:53] 2026-01-27 04:05:53,128 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 05:06:53] 2026-01-27 04:05:53,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 05:06:53] 2026-01-27 04:05:53,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 05:06:53] 2026-01-27 04:05:53,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 05:06:53] 2026-01-27 04:05:53,134 | INFO     | fitting pss+swap vs Time
[2026-01-27 05:06:53] 2026-01-27 04:05:53,135 | INFO     | sum of square deviations: 4286517580.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,137 | INFO     | sum of deviations: 138791162255.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,137 | INFO     | mean x: 1769479420.5
[2026-01-27 05:06:53] 2026-01-27 04:05:53,137 | INFO     | mean y: 2404953.3333333335
[2026-01-27 05:06:53] 2026-01-27 04:05:53,137 | INFO     | intersect: -57290747535.61526
[2026-01-27 05:06:53] 2026-01-27 04:05:53,138 | INFO     | chi2: 8.734056779549004
[2026-01-27 05:06:53] 2026-01-27 04:05:53,138 | INFO     | sum of square deviations: 4024149870.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,140 | INFO     | sum of deviations: 151474123533.00003
[2026-01-27 05:06:53] 2026-01-27 04:05:53,140 | INFO     | mean x: 1769479268.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,140 | INFO     | mean y: 2412169.336170213
[2026-01-27 05:06:53] 2026-01-27 04:05:53,141 | INFO     | intersect: -66603039886.08503
[2026-01-27 05:06:53] 2026-01-27 04:05:53,141 | INFO     | chi2: 8.034922336675908
[2026-01-27 05:06:53] 2026-01-27 04:05:53,141 | INFO     | current chi2=8.034922336675908 (change=8.004693128514289 %)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,141 | INFO     | right removable region: 234
[2026-01-27 05:06:53] 2026-01-27 04:05:53,142 | INFO     | sum of square deviations: 4024149870.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,147 | INFO     | sum of deviations: 54776377461.00002
[2026-01-27 05:06:53] 2026-01-27 04:05:53,147 | INFO     | mean x: 1769479573.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,147 | INFO     | mean y: 2453763.0382978725
[2026-01-27 05:06:53] 2026-01-27 04:05:53,147 | INFO     | intersect: -24083548033.951717
[2026-01-27 05:06:53] 2026-01-27 04:05:53,148 | INFO     | chi2: 3.5374868779853124
[2026-01-27 05:06:53] 2026-01-27 04:05:53,148 | INFO     | current chi2=3.5374868779853124 (change=59.49778015791677 %)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,148 | INFO     | sum of square deviations: 3772712597.5
[2026-01-27 05:06:53] 2026-01-27 04:05:53,150 | INFO     | sum of deviations: -7543973791.5
[2026-01-27 05:06:53] 2026-01-27 04:05:53,150 | INFO     | mean x: 1769479725.5
[2026-01-27 05:06:53] 2026-01-27 04:05:53,150 | INFO     | mean y: 2491511.752173913
[2026-01-27 05:06:53] 2026-01-27 04:05:53,151 | INFO     | intersect: 3540770224.688937
[2026-01-27 05:06:53] 2026-01-27 04:05:53,151 | INFO     | chi2: 0.900712962293428
[2026-01-27 05:06:53] 2026-01-27 04:05:53,151 | INFO     | current chi2=0.900712962293428 (change=74.53805502717775 %)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,151 | INFO     | sum of square deviations: 3531973200.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,153 | INFO     | sum of deviations: -18808590916.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | mean x: 1769479878.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | mean y: 2498626.248888889
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | intersect: 9425396614.09194
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | chi2: 0.7955193445781018
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | current chi2=0.7955193445781018 (change=11.678927929212698 %)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,154 | INFO     | left removable region: 30
[2026-01-27 05:06:53] 2026-01-27 04:05:53,155 | INFO     | sum of square deviations: 2632440055.0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,157 | INFO     | sum of deviations: -5063783727.999999
[2026-01-27 05:06:53] 2026-01-27 04:05:53,157 | INFO     | mean x: 1769480152.5
[2026-01-27 05:06:53] 2026-01-27 04:05:53,157 | INFO     | mean y: 2509420.254901961
[2026-01-27 05:06:53] 2026-01-27 04:05:53,157 | INFO     | intersect: 3406296255.2977448
[2026-01-27 05:06:53] 2026-01-27 04:05:53,157 | INFO     | chi2: 0.004833607511262979
[2026-01-27 05:06:53] 2026-01-27 04:05:53,158 | INFO     | current memory leak: -1.92 B/s (using 204 data points, chi2=0.00)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,158 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,158 | INFO     | ..............................
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . Timing measurements:
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . get job = 0 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . initial setup = 127 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . payload setup = 153 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . stage-in = 0 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . payload execution = 14737 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . stage-out = 3 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | . log creation = 1 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,159 | INFO     | ..............................
[2026-01-27 05:06:53] 2026-01-27 04:05:53,438 | INFO     | time since job start (14915s) is within the limit (349056.0s)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | 
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | job summary report
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | --------------------------------------------------
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | PanDA job id: 6982919865
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | task id: 48310724
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | errors: (none)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | pilot state: finished 
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | transexitcode: 0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,443 | INFO     | exeerrorcode: 0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | exeerrordiag: 
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | exitcode: 0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | exitmsg: OK
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | cpuconsumptiontime: 54703 s
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | nevents: 400
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | neventsw: 0
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | pid: 8017
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | pgrp: 8017
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | corecount: 8
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | event service: False
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | sizes: {0: 2283762, 1: 2283846, 2: 2284307, 13: 2284307, 14895: 2315232, 14898: 2324230, 14899: 2324414, 14901: 2324608}
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | --------------------------------------------------
[2026-01-27 05:06:53] 2026-01-27 04:05:53,444 | INFO     | 
[2026-01-27 05:06:53] 2026-01-27 04:05:53,445 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 05:06:53] 2026-01-27 04:05:53,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,925 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 05:06:53] 2026-01-27 04:05:53,925 | INFO     | job 6982919865 has completed (purged errors)
[2026-01-27 05:06:53] 2026-01-27 04:05:53,925 | INFO     | overall cleanup function is called
[2026-01-27 05:06:53] 2026-01-27 04:05:54,934 | INFO     | --- collectZombieJob: --- 10, [8017]
[2026-01-27 05:06:53] 2026-01-27 04:05:54,934 | INFO     | zombie collector waiting for pid 8017
[2026-01-27 05:06:53] 2026-01-27 04:05:54,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 05:06:53] 2026-01-27 04:05:54,934 | INFO     | collected zombie processes
[2026-01-27 05:06:53] 2026-01-27 04:05:54,934 | INFO     | will attempt to kill all subprocesses of pid=8017
[2026-01-27 05:06:53] 2026-01-27 04:05:55,018 | INFO     | process IDs to be killed: [8017] (in reverse order)
[2026-01-27 05:06:53] 2026-01-27 04:05:55,706 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 05:06:53] 2026-01-27 04:05:55,707 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 05:06:53] 2026-01-27 04:05:55,709 | INFO     | did not find any defunct processes belonging to 8017
[2026-01-27 05:06:53] 2026-01-27 04:05:55,710 | INFO     | did not find any defunct processes belonging to 8017
[2026-01-27 05:06:53] 2026-01-27 04:05:55,711 | INFO     | ready for new job
[2026-01-27 05:06:53] 2026-01-27 04:05:55,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 05:06:53] 2026-01-27 04:05:55,713 | INFO     | **************************************
[2026-01-27 05:06:53] 2026-01-27 04:05:55,713 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 05:06:53] 2026-01-27 04:05:55,713 | INFO     | **************************************
[2026-01-27 05:06:53] 2026-01-27 04:05:55,713 | INFO     | 
[2026-01-27 05:06:53] 2026-01-27 04:05:55,714 | INFO     | pilot is running in a VM
[2026-01-27 05:06:53] 2026-01-27 04:05:55,714 | INFO     | architecture information:
[2026-01-27 05:06:53] 2026-01-27 04:05:55,725 | INFO     | executing command: cat /etc/os-release
[2026-01-27 05:06:53] 2026-01-27 04:05:56,011 | INFO     | cat /etc/os-release:
[2026-01-27 05:06:53] NAME="CentOS Linux"
[2026-01-27 05:06:53] VERSION="7 (Core)"
[2026-01-27 05:06:53] ID="centos"
[2026-01-27 05:06:53] ID_LIKE="rhel fedora"
[2026-01-27 05:06:53] VERSION_ID="7"
[2026-01-27 05:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 05:06:53] ANSI_COLOR="0;31"
[2026-01-27 05:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 05:06:53] HOME_URL="https://www.centos.org/"
[2026-01-27 05:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 05:06:53] 
[2026-01-27 05:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 05:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 05:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 05:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 05:06:53] 
[2026-01-27 05:06:53] 2026-01-27 04:05:56,012 | INFO     | **************************************
[2026-01-27 05:06:53] 2026-01-27 04:05:56,515 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 05:06:53] 2026-01-27 04:05:56,726 | INFO     | sufficient remaining disk space (494762196992 B)
[2026-01-27 05:06:53] 2026-01-27 04:05:56,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 05:06:53] 2026-01-27 04:05:56,727 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 05:06:53] 2026-01-27 04:05:56,727 | INFO     | update_server=False
[2026-01-27 05:06:53] 2026-01-27 04:05:56,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 05:06:53] 2026-01-27 04:05:56,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 05:06:53] 2026-01-27 04:05:56,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:06:53] 2026-01-27 04:05:56,732 | INFO     | aborting loop
[2026-01-27 05:06:53] 2026-01-27 04:05:56,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 05:06:53] 2026-01-27 04:05:56,921 | INFO     | all data control threads have been joined
[2026-01-27 05:06:53] 2026-01-27 04:05:57,445 | INFO     | all payload control threads have been joined
[2026-01-27 05:06:53] 2026-01-27 04:05:57,733 | INFO     | [job] retrieve thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:57,738 | INFO     | [job] job monitor thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:57,740 | INFO     | [payload] validate_post thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:57,927 | INFO     | [data] control thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,082 | INFO     | [payload] failed_post thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,098 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,261 | INFO     | [data] copytool_in thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:06:53] 2026-01-27 04:05:58,401 | INFO     | all job control threads have been joined
[2026-01-27 05:06:53] 2026-01-27 04:05:58,446 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,451 | INFO     | [payload] control thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:58,735 | INFO     | [data] copytool_out thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:59,017 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:59,041 | INFO     | [job] validate thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:59,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:59,301 | INFO     | [job] queue monitor thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:05:59,407 | INFO     | [job] control thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:06:00,745 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 05:06:53] 2026-01-27 04:06:26,552 | INFO     | PID=3558 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 05:06:53] 2026-01-27 04:06:26,553 | INFO     | .. there are 2 such processes running
[2026-01-27 05:06:53] 2026-01-27 04:06:26,553 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 05:06:53] 2026-01-27 04:06:26,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 05:06:53] 2026-01-27 04:06:26,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 05:06:53] 2026-01-27 04:06:43,099 | INFO     | [monitor] cgroup control has ended
[2026-01-27 05:06:53] 2026-01-27 04:06:43,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065735997248)>', '<ExcThread(monitor, started 140065284007680)>']
[2026-01-27 05:06:53] 2026-01-27 04:06:43,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 05:06:53] 2026-01-27 04:06:43,656 | INFO     | [monitor] control thread has ended
[2026-01-27 05:06:53] 2026-01-27 04:06:48,391 | INFO     | all workflow threads have been joined
[2026-01-27 05:06:53] 2026-01-27 04:06:48,391 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 05:06:53] 2026-01-27 04:06:48,391 | INFO     | traces error code: 0
[2026-01-27 05:06:53] 2026-01-27 04:06:48,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 05:06:53] 2026-01-27 04:06:48,817 [wrapper] ==== pilot stdout END ====
[2026-01-27 05:06:53] 2026-01-27 04:06:48,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 05:06:53] 2026-01-27 04:06:48,948 [wrapper] pilotpid: 3558
[2026-01-27 05:06:53] 2026-01-27 04:06:49,053 [wrapper] Pilot exit status: 0
[2026-01-27 05:06:53] 2026-01-27 04:06:49,404 [wrapper] pandaids: 6982919865
[2026-01-27 05:06:53] 2026-01-27 04:06:50,563 [wrapper] cleanup supervisor_pilot 13948 3559
[2026-01-27 05:06:53] 2026-01-27 04:06:50,570 [wrapper] Test setup, not cleaning
[2026-01-27 05:06:53] 2026-01-27 04:06:50,655 [wrapper] apfmon messages muted
[2026-01-27 05:06:53] 2026-01-27 04:06:50,781 [wrapper] ==== wrapper stdout END ====
[2026-01-27 05:06:53] 2026-01-27 04:06:50,902 [wrapper] ==== wrapper stderr END ====
[2026-01-27 05:06:53]  *** Error codes and diagnostics ***
[2026-01-27 05:06:53]     "exeErrorCode": 0,
[2026-01-27 05:06:53]     "exeErrorDiag": "",
[2026-01-27 05:06:53]     "pilotErrorCode": 0,
[2026-01-27 05:06:53]     "pilotErrorDiag": "",
[2026-01-27 05:06:53]  *** Listing of results directory ***
[2026-01-27 05:06:53] total 669308
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc    584422 Jan 25 12:26 pilot3.tar.gz
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc      5111 Jan 25 12:28 queuedata.json
[2026-01-27 05:06:53] -rwx------. 1 boinc boinc     36322 Jan 25 12:28 runpilot2-wrapper.sh
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc       100 Jan 27 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 05:06:53] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 00:50 run_atlas
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc       105 Jan 27 00:50 job.xml
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc      6391 Jan 27 00:50 init_data.xml
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc 497244144 Jan 27 00:50 EVNT.48310721._000158.pool.root.1
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:50 start_atlas.sh
[2026-01-27 05:06:53] drwxrwx--x. 2 boinc boinc        68 Jan 27 00:50 shared
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc    597759 Jan 27 00:50 input.tar.gz
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc         0 Jan 27 00:50 boinc_lockfile
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc      2533 Jan 27 00:50 pandaJob.out
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc       415 Jan 27 00:57 workernode_map.json
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc   1006441 Jan 27 00:57 agis_schedconf.cvmfs.json
[2026-01-27 05:06:53] drwx------. 5 boinc boinc      4096 Jan 27 00:57 pilot3
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc 179050018 Jan 27 05:04 HITS.48310724._007869.pool.root.1
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc       532 Jan 27 05:04 boinc_task_state.xml
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc      1011 Jan 27 05:05 memory_monitor_summary.json
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc   1516246 Jan 27 05:05 agis_ddmendpoints.agis.ALL.json
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc    479619 Jan 27 05:05 log.48310724._007869.job.log.tgz.1
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc      6317 Jan 27 05:05 heartbeat.json
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc        95 Jan 27 05:06 pilot_heartbeat.json
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc      8192 Jan 27 05:06 boinc_mmap_file
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc        28 Jan 27 05:06 wrapper_checkpoint.txt
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc      4879 Jan 27 05:06 pilotlog.txt
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc   2097141 Jan 27 05:06 log.48310724._007869.job.log.1
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc       357 Jan 27 05:06 output.list
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc       620 Jan 27 05:06 runtime_log
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc   2590720 Jan 27 05:06 result.tar.gz
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc      8816 Jan 27 05:06 runtime_log.err
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc       655 Jan 27 05:06 PqNODm0SD48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZi0KDmkrmXWm.diag
[2026-01-27 05:06:53] -rw-r--r--. 1 boinc boinc     20711 Jan 27 05:06 stderr.txt
[2026-01-27 05:06:53] HITS file was successfully produced:
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc 179050018 Jan 27 05:04 shared/HITS.pool.root.1
[2026-01-27 05:06:53]  *** Contents of shared directory: ***
[2026-01-27 05:06:53] total 663580
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc 497244144 Jan 27 00:50 ATLAS.root_0
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc     15845 Jan 27 00:50 start_atlas.sh
[2026-01-27 05:06:53] -rw-r--r--. 2 boinc boinc    597759 Jan 27 00:50 input.tar.gz
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc 179050018 Jan 27 05:04 HITS.pool.root.1
[2026-01-27 05:06:53] -rw-------. 1 boinc boinc   2590720 Jan 27 05:06 result.tar.gz
05:06:55 (31945): run_atlas exited; CPU time 54867.409064
05:06:55 (31945): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN