Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:45 (1119464): wrapper (7.7.26015): starting
09:20:45 (1119464): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 09:20:45] Arguments: --nthreads 8
[2026-01-26 09:20:45] Threads: 8
[2026-01-26 09:20:45] Checking for CVMFS
[2026-01-26 09:20:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:20:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:20:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:20:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:20:47] 2.13.3.0 10299 118002 688648 155549 0 165 22077516 32935936 41550 16776704 0 1090140292 99.774 603088056 28913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 09:20:47] CVMFS is ok
[2026-01-26 09:20:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:20:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 09:20:48] Further information can be found at the LHC@home message board.
[2026-01-26 09:20:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:20:48] Checking for apptainer binary...
[2026-01-26 09:20:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:20:48] Running /usr/bin/apptainer --version
[2026-01-26 09:20:48] apptainer version 1.4.5-2.el9
[2026-01-26 09:20:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:20:49] c-3-40.aglt2.org
[2026-01-26 09:20:49] apptainer works
[2026-01-26 09:20:49] Set ATHENA_PROC_NUMBER=8
[2026-01-26 09:20:49] Set ATHENA_CORE_NUMBER=8
[2026-01-26 09:20:49] Starting ATLAS job with PandaID=6983771561
[2026-01-26 09:20:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:28:57]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:28:57] 2026-01-26 17:28:10,458 | INFO     | total number of processed events: 400 (read)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,526 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6983771561/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,527 | INFO     | extracted standard info from prmon json
[2026-01-26 12:28:57] 2026-01-26 17:28:10,527 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 12:28:57] 2026-01-26 17:28:10,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:28:57] 2026-01-26 17:28:10,532 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:28:57] 2026-01-26 17:28:10,532 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:28:57] 2026-01-26 17:28:10,551 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:28:57] 2026-01-26 17:28:10,552 | INFO     | sum of square deviations: 1748682347.5505564
[2026-01-26 12:28:57] 2026-01-26 17:28:10,553 | INFO     | sum of deviations: 31753146256.49439
[2026-01-26 12:28:57] 2026-01-26 17:28:10,553 | INFO     | mean x: 1769443024.5730338
[2026-01-26 12:28:57] 2026-01-26 17:28:10,554 | INFO     | mean y: 2502998.2696629213
[2026-01-26 12:28:57] 2026-01-26 17:28:10,554 | INFO     | intersect: -32127622424.739418
[2026-01-26 12:28:57] 2026-01-26 17:28:10,554 | INFO     | chi2: 2.9400277862267403
[2026-01-26 12:28:57] 2026-01-26 17:28:10,554 | INFO     | sum of square deviations: 1605418510.023122
[2026-01-26 12:28:57] 2026-01-26 17:28:10,575 | INFO     | sum of deviations: 30935742686.676296
[2026-01-26 12:28:57] 2026-01-26 17:28:10,575 | INFO     | mean x: 1769442872.0751445
[2026-01-26 12:28:57] 2026-01-26 17:28:10,575 | INFO     | mean y: 2502127.947976879
[2026-01-26 12:28:57] 2026-01-26 17:28:10,575 | INFO     | intersect: -34093921357.602703
[2026-01-26 12:28:57] 2026-01-26 17:28:10,576 | INFO     | chi2: 2.94445357759898
[2026-01-26 12:28:57] 2026-01-26 17:28:10,576 | INFO     | current chi2=2.94445357759898 (change=-0.15053569877717868 %)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,576 | INFO     | right removable region: 172
[2026-01-26 12:28:57] 2026-01-26 17:28:10,576 | INFO     | sum of square deviations: 1605410580.023122
[2026-01-26 12:28:57] 2026-01-26 17:28:10,604 | INFO     | sum of deviations: -15363621492.606945
[2026-01-26 12:28:57] 2026-01-26 17:28:10,604 | INFO     | mean x: 1769443177.0751445
[2026-01-26 12:28:57] 2026-01-26 17:28:10,604 | INFO     | mean y: 2552932.2774566473
[2026-01-26 12:28:57] 2026-01-26 17:28:10,604 | INFO     | intersect: 16935950259.749207
[2026-01-26 12:28:57] 2026-01-26 17:28:10,605 | INFO     | chi2: 0.13043714752126676
[2026-01-26 12:28:57] 2026-01-26 17:28:10,605 | INFO     | current chi2=0.13043714752126676 (change=95.56340425990766 %)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,605 | INFO     | sum of square deviations: 1470196271.1428552
[2026-01-26 12:28:57] 2026-01-26 17:28:10,606 | INFO     | sum of deviations: -19462884530.42856
[2026-01-26 12:28:57] 2026-01-26 17:28:10,630 | INFO     | mean x: 1769443329.5714285
[2026-01-26 12:28:57] 2026-01-26 17:28:10,630 | INFO     | mean y: 2557477.119047619
[2026-01-26 12:28:57] 2026-01-26 17:28:10,630 | INFO     | intersect: 23426961335.66989
[2026-01-26 12:28:57] 2026-01-26 17:28:10,630 | INFO     | chi2: 0.0744508818134543
[2026-01-26 12:28:57] 2026-01-26 17:28:10,630 | INFO     | current chi2=0.0744508818134543 (change=42.92202549023416 %)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,631 | INFO     | sum of square deviations: 1342796062.257667
[2026-01-26 12:28:57] 2026-01-26 17:28:10,631 | INFO     | sum of deviations: -15992676434.06135
[2026-01-26 12:28:57] 2026-01-26 17:28:10,631 | INFO     | mean x: 1769443482.0674846
[2026-01-26 12:28:57] 2026-01-26 17:28:10,631 | INFO     | mean y: 2553289.4601226994
[2026-01-26 12:28:57] 2026-01-26 17:28:10,632 | INFO     | intersect: 21076592655.859478
[2026-01-26 12:28:57] 2026-01-26 17:28:10,632 | INFO     | chi2: 0.06214304432872057
[2026-01-26 12:28:57] 2026-01-26 17:28:10,632 | INFO     | current chi2=0.06214304432872057 (change=16.531486511566786 %)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,632 | INFO     | left removable region: 30
[2026-01-26 12:28:57] 2026-01-26 17:28:10,632 | INFO     | sum of square deviations: 887801113.1549318
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | sum of deviations: -5224557830.633799
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | mean x: 1769443756.5492957
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | mean y: 2539079.1619718308
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | intersect: 10415413198.336931
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | chi2: 0.03635986929027682
[2026-01-26 12:28:57] 2026-01-26 17:28:10,633 | INFO     | current memory leak: -5.88 B/s (using 142 data points, chi2=0.04)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | could have reported an average CPU frequency of 2940 MHz (10 samples)
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | ..............................
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | . Timing measurements:
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | . get job = 1 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | . initial setup = 72 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | . payload setup = 92 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,656 | INFO     | . stage-in = 0 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,657 | INFO     | . payload execution = 10915 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,657 | INFO     | . stage-out = 4 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,657 | INFO     | . log creation = 0 s
[2026-01-26 12:28:57] 2026-01-26 17:28:10,657 | INFO     | ..............................
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | 
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | job summary report
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | --------------------------------------------------
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | PanDA job id: 6983771561
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | task id: 48317892
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | errors: (none)
[2026-01-26 12:28:57] 2026-01-26 17:28:11,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | pilot state: finished 
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | transexitcode: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | exeerrorcode: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | exeerrordiag: 
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | exitcode: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | exitmsg: OK
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | cpuconsumptiontime: 43870 s
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | nevents: 400
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | neventsw: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | pid: 1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | pgrp: 1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | corecount: 8
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | event service: False
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | sizes: {0: 2283040, 1: 2283725, 2: 2283725, 3: 2283725, 4: 2284214, 11008: 2313180, 11009: 2313307, 11014: 2322361, 11015: 2322417, 11016: 2322611}
[2026-01-26 12:28:57] 2026-01-26 17:28:11,349 | INFO     | --------------------------------------------------
[2026-01-26 12:28:57] 2026-01-26 17:28:11,350 | INFO     | 
[2026-01-26 12:28:57] 2026-01-26 17:28:11,350 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 12:28:57] 2026-01-26 17:28:11,462 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | job 6983771561 has completed (purged errors)
[2026-01-26 12:28:57] 2026-01-26 17:28:11,464 | INFO     | overall cleanup function is called
[2026-01-26 12:28:57] 2026-01-26 17:28:12,532 | INFO     | --- collectZombieJob: --- 10, [1158923]
[2026-01-26 12:28:57] 2026-01-26 17:28:12,532 | INFO     | zombie collector waiting for pid 1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:12,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:28:57] 2026-01-26 17:28:12,532 | INFO     | collected zombie processes
[2026-01-26 12:28:57] 2026-01-26 17:28:12,532 | INFO     | will attempt to kill all subprocesses of pid=1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:12,822 | INFO     | PID=1140930 has CPU usage=18.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 12:28:57] 2026-01-26 17:28:12,822 | INFO     | .. there are 62 such processes running
[2026-01-26 12:28:57] 2026-01-26 17:28:13,465 | INFO     | process IDs to be killed: [1158923] (in reverse order)
[2026-01-26 12:28:57] 2026-01-26 17:28:13,987 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:28:57] 2026-01-26 17:28:13,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:28:57] 2026-01-26 17:28:14,106 | INFO     | did not find any defunct processes belonging to 1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:14,198 | INFO     | did not find any defunct processes belonging to 1158923
[2026-01-26 12:28:57] 2026-01-26 17:28:14,198 | INFO     | ready for new job
[2026-01-26 12:28:57] 2026-01-26 17:28:14,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:28:57] 2026-01-26 17:28:14,200 | INFO     | **************************************
[2026-01-26 12:28:57] 2026-01-26 17:28:14,200 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:28:57] 2026-01-26 17:28:14,200 | INFO     | **************************************
[2026-01-26 12:28:57] 2026-01-26 17:28:14,201 | INFO     | 
[2026-01-26 12:28:57] 2026-01-26 17:28:14,217 | INFO     | architecture information:
[2026-01-26 12:28:57] 2026-01-26 17:28:14,221 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:28:57] 2026-01-26 17:28:14,262 | INFO     | cat /etc/os-release:
[2026-01-26 12:28:57] NAME="CentOS Linux"
[2026-01-26 12:28:57] VERSION="7 (Core)"
[2026-01-26 12:28:57] ID="centos"
[2026-01-26 12:28:57] ID_LIKE="rhel fedora"
[2026-01-26 12:28:57] VERSION_ID="7"
[2026-01-26 12:28:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:28:57] ANSI_COLOR="0;31"
[2026-01-26 12:28:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:28:57] HOME_URL="https://www.centos.org/"
[2026-01-26 12:28:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:28:57] 
[2026-01-26 12:28:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:28:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:28:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:28:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:28:57] 
[2026-01-26 12:28:57] 2026-01-26 17:28:14,262 | INFO     | **************************************
[2026-01-26 12:28:57] 2026-01-26 17:28:14,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 12:28:57] 2026-01-26 17:28:14,828 | INFO     | sufficient remaining disk space (73572286464 B)
[2026-01-26 12:28:57] 2026-01-26 17:28:14,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:28:57] 2026-01-26 17:28:14,829 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:28:57] 2026-01-26 17:28:14,829 | INFO     | update_server=False
[2026-01-26 12:28:57] 2026-01-26 17:28:14,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:28:57] 2026-01-26 17:28:14,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:28:57] 2026-01-26 17:28:15,026 | INFO     | all payload control threads have been joined
[2026-01-26 12:28:57] 2026-01-26 17:28:15,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:28:57] 2026-01-26 17:28:15,285 | INFO     | aborting loop
[2026-01-26 12:28:57] 2026-01-26 17:28:15,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:28:57] 2026-01-26 17:28:15,648 | INFO     | all job control threads have been joined
[2026-01-26 12:28:57] 2026-01-26 17:28:15,728 | INFO     | all data control threads have been joined
[2026-01-26 12:28:57] 2026-01-26 17:28:15,835 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,032 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,032 | INFO     | [payload] control thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,159 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,230 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,286 | INFO     | [job] validate thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,292 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:28:57] 2026-01-26 17:28:16,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,488 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,666 | INFO     | [job] control thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,683 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,734 | INFO     | [data] control thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:16,870 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:17,307 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:19,620 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:25,483 | INFO     | job.realtimelogging is not enabled
[2026-01-26 12:28:57] 2026-01-26 17:28:26,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:28:57] 2026-01-26 17:28:46,121 | INFO     | PID=1140930 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 12:28:57] 2026-01-26 17:28:46,121 | INFO     | .. there are 62 such processes running
[2026-01-26 12:28:57] 2026-01-26 17:28:46,121 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:28:57] 2026-01-26 17:28:46,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:28:57] 2026-01-26 17:28:46,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:28:57] 2026-01-26 17:28:49,169 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:28:57] 2026-01-26 17:28:51,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055532500800)>', '<ExcThread(monitor, started 140054588552960)>']
[2026-01-26 12:28:57] 2026-01-26 17:28:51,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:28:57] 2026-01-26 17:28:51,153 | INFO     | [monitor] control thread has ended
[2026-01-26 12:28:57] 2026-01-26 17:28:56,177 | INFO     | all workflow threads have been joined
[2026-01-26 12:28:57] 2026-01-26 17:28:56,177 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:28:57] 2026-01-26 17:28:56,177 | INFO     | traces error code: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:56,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:28:57] 2026-01-26 17:28:56,413 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:28:57] 2026-01-26 17:28:56,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:28:57] 2026-01-26 17:28:56,493 [wrapper] pilotpid: 1140930
[2026-01-26 12:28:57] 2026-01-26 17:28:56,522 [wrapper] Pilot exit status: 0
[2026-01-26 12:28:57] 2026-01-26 17:28:56,655 [wrapper] pandaids: 6983771561
[2026-01-26 12:28:57] 2026-01-26 17:28:56,780 [wrapper] cleanup supervisor_pilot 2791037 1140931
[2026-01-26 12:28:57] 2026-01-26 17:28:56,794 [wrapper] Test setup, not cleaning
[2026-01-26 12:28:57] 2026-01-26 17:28:56,811 [wrapper] apfmon messages muted
[2026-01-26 12:28:57] 2026-01-26 17:28:56,826 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:28:57] 2026-01-26 17:28:56,847 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:28:57]  *** Error codes and diagnostics ***
[2026-01-26 12:28:57]     "exeErrorCode": 0,
[2026-01-26 12:28:57]     "exeErrorDiag": "",
[2026-01-26 12:28:57]     "pilotErrorCode": 0,
[2026-01-26 12:28:57]     "pilotErrorDiag": "",
[2026-01-26 12:28:57]  *** Listing of results directory ***
[2026-01-26 12:28:57] total 676560
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 20:12 queuedata.json
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 12:28:57] -rwx------. 1 boincer umatlas     36322 Jan 25 20:12 runpilot2-wrapper.sh
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas       100 Jan 26 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:28:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 09:20 run_atlas
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas       105 Jan 26 09:20 job.xml
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas 502416453 Jan 26 09:20 EVNT.48317889._000006.pool.root.1
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 09:20 start_atlas.sh
[2026-01-26 12:28:57] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 09:20 shared
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas    597752 Jan 26 09:20 input.tar.gz
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas         0 Jan 26 09:20 boinc_lockfile
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas      2515 Jan 26 09:20 pandaJob.out
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas        57 Jan 26 09:20 setup.sh.local
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas       439 Jan 26 09:24 workernode_map.json
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas   1002189 Jan 26 09:24 agis_schedconf.cvmfs.json
[2026-01-26 12:28:57] drwx------. 5 boincer umatlas      4096 Jan 26 09:24 pilot3
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas      6841 Jan 26 12:21 init_data.xml
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas 182888718 Jan 26 12:27 HITS.48317892._000517.pool.root.1
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas       532 Jan 26 12:27 boinc_task_state.xml
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas        95 Jan 26 12:27 pilot_heartbeat.json
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas      1043 Jan 26 12:28 memory_monitor_summary.json
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas   1516246 Jan 26 12:28 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas    404305 Jan 26 12:28 log.48317892._000517.job.log.tgz.1
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas      6386 Jan 26 12:28 heartbeat.json
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas      4892 Jan 26 12:28 pilotlog.txt
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas        28 Jan 26 12:28 wrapper_checkpoint.txt
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 12:28 boinc_mmap_file
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas   1370462 Jan 26 12:28 log.48317892._000517.job.log.1
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas       357 Jan 26 12:28 output.list
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas       620 Jan 26 12:28 runtime_log
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas   1792000 Jan 26 12:28 result.tar.gz
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas      9332 Jan 26 12:28 runtime_log.err
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas       655 Jan 26 12:28 lfbNDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAi8KDmBvX9Km.diag
[2026-01-26 12:28:57] -rw-r--r--. 1 boincer umatlas     21264 Jan 26 12:28 stderr.txt
[2026-01-26 12:28:57] HITS file was successfully produced:
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas 182888718 Jan 26 12:27 shared/HITS.pool.root.1
[2026-01-26 12:28:57]  *** Contents of shared directory: ***
[2026-01-26 12:28:57] total 671608
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas 502416453 Jan 26 09:20 ATLAS.root_0
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 09:20 start_atlas.sh
[2026-01-26 12:28:57] -rw-r--r--. 2 boincer umatlas    597752 Jan 26 09:20 input.tar.gz
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas 182888718 Jan 26 12:27 HITS.pool.root.1
[2026-01-26 12:28:57] -rw-------. 1 boincer umatlas   1792000 Jan 26 12:28 result.tar.gz
12:28:59 (1119464): run_atlas exited; CPU time 44457.634269
12:28:59 (1119464): called boinc_finish(0)

</stderr_txt>
]]>

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