Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:51:02 (625432): wrapper (7.7.26015): starting
23:51:02 (625432): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 23:51:02] Arguments: --nthreads 2
[2026-01-26 23:51:02] Threads: 2
[2026-01-26 23:51:02] Checking for CVMFS
[2026-01-26 23:51:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 23:51:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 23:51:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 23:51:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 23:51:04] 2.13.3.0 440795 527 64544 155564 1 228 5963690 6144001 2617 130560 0 243827 98.238 313055 2011 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.1.1:3128 1
[2026-01-26 23:51:04] CVMFS is ok
[2026-01-26 23:51:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 23:51:04] Checking for apptainer binary...
[2026-01-26 23:51:04] apptainer is not installed, using version from CVMFS
[2026-01-26 23:51:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 23:51:04] pitot
[2026-01-26 23:51:04] apptainer works
[2026-01-26 23:51:04] Set ATHENA_PROC_NUMBER=2
[2026-01-26 23:51:04] Set ATHENA_CORE_NUMBER=2
[2026-01-26 23:51:04] Starting ATLAS job with PandaID=6983601784
[2026-01-26 23:51:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 23:52:46]  *** The last 200 lines of the pilot log: ***
[2026-01-27 23:52:46] 2026-01-27 22:52:05,275 | INFO     | preparing for final server update for job 6983601784 in state='finished'
[2026-01-27 23:52:46] 2026-01-27 22:52:05,276 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-6983601784/jobReport.json
[2026-01-27 23:52:46] 2026-01-27 22:52:05,280 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-01-27 23:52:46] 2026-01-27 22:52:05,280 | INFO     | this job has now completed (state=finished)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,280 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,281 | INFO     | log transfer has been attempted: DONE
[2026-01-27 23:52:46] 2026-01-27 22:52:05,281 | INFO     | job 6983601784 has finished - writing final server update
[2026-01-27 23:52:46] 2026-01-27 22:52:05,281 | INFO     | total number of processed events: 400 (read)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,286 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6983601784/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,287 | INFO     | extracted standard info from prmon json
[2026-01-27 23:52:46] 2026-01-27 22:52:05,288 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 23:52:46] 2026-01-27 22:52:05,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 23:52:46] 2026-01-27 22:52:05,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 23:52:46] 2026-01-27 22:52:05,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 23:52:46] 2026-01-27 22:52:05,327 | INFO     | fitting pss+swap vs Time
[2026-01-27 23:52:46] 2026-01-27 22:52:05,330 | INFO     | sum of square deviations: 882242059868.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,392 | INFO     | sum of deviations: 813570388585.0002
[2026-01-27 23:52:46] 2026-01-27 22:52:05,393 | INFO     | mean x: 1769511091.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,393 | INFO     | mean y: 2268201.13549753
[2026-01-27 23:52:46] 2026-01-27 22:52:05,393 | INFO     | intersect: -1629508259.5398552
[2026-01-27 23:52:46] 2026-01-27 22:52:05,394 | INFO     | chi2: 1.393734011815484
[2026-01-27 23:52:46] 2026-01-27 22:52:05,396 | INFO     | sum of square deviations: 872935783053.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,440 | INFO     | sum of deviations: 805658190977.5
[2026-01-27 23:52:46] 2026-01-27 22:52:05,440 | INFO     | mean x: 1769510938.5
[2026-01-27 23:52:46] 2026-01-27 22:52:05,440 | INFO     | mean y: 2268071.4794617565
[2026-01-27 23:52:46] 2026-01-27 22:52:05,440 | INFO     | intersect: -1630865784.7600553
[2026-01-27 23:52:46] 2026-01-27 22:52:05,442 | INFO     | chi2: 1.3937512224305668
[2026-01-27 23:52:46] 2026-01-27 22:52:05,442 | INFO     | current chi2=1.3937512224305668 (change=-0.0012348565032466012 %)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,442 | INFO     | right removable region: 1411
[2026-01-27 23:52:46] 2026-01-27 22:52:05,443 | INFO     | sum of square deviations: 872935783053.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,487 | INFO     | sum of deviations: 646035512130.5
[2026-01-27 23:52:46] 2026-01-27 22:52:05,487 | INFO     | mean x: 1769511243.5
[2026-01-27 23:52:46] 2026-01-27 22:52:05,487 | INFO     | mean y: 2270940.724504249
[2026-01-27 23:52:46] 2026-01-27 22:52:05,487 | INFO     | intersect: -1307295151.7744138
[2026-01-27 23:52:46] 2026-01-27 22:52:05,489 | INFO     | chi2: 0.08743881405190976
[2026-01-27 23:52:46] 2026-01-27 22:52:05,489 | INFO     | current chi2=0.08743881405190976 (change=93.72629114948471 %)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,490 | INFO     | sum of square deviations: 863695181888.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,498 | INFO     | time since job start (86444s) is within the limit (349056.0s)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,534 | INFO     | sum of deviations: 664998058048.9999
[2026-01-27 23:52:46] 2026-01-27 22:52:05,535 | INFO     | mean x: 1769511396.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,535 | INFO     | mean y: 2270627.771144279
[2026-01-27 23:52:46] 2026-01-27 22:52:05,535 | INFO     | intersect: -1360156379.7100282
[2026-01-27 23:52:46] 2026-01-27 22:52:05,536 | INFO     | chi2: 0.07301332405901412
[2026-01-27 23:52:46] 2026-01-27 22:52:05,536 | INFO     | current chi2=0.07301332405901412 (change=16.497810668305345 %)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,536 | INFO     | left removable region: 20
[2026-01-27 23:52:46] 2026-01-27 22:52:05,538 | INFO     | sum of square deviations: 834563889640.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,580 | INFO     | sum of deviations: 687114493708.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,580 | INFO     | mean x: 1769511518.0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,580 | INFO     | mean y: 2269963.17325665
[2026-01-27 23:52:46] 2026-01-27 22:52:05,580 | INFO     | intersect: -1454607126.6389089
[2026-01-27 23:52:46] 2026-01-27 22:52:05,582 | INFO     | chi2: 0.03247705887885431
[2026-01-27 23:52:46] 2026-01-27 22:52:05,582 | INFO     | current memory leak: 0.82 B/s (using 1391 data points, chi2=0.03)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,582 | INFO     | could have reported an average CPU frequency of 2705 MHz (51 samples)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | ..............................
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . Timing measurements:
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . get job = 0 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . initial setup = 6 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . payload setup = 5 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . stage-in = 0 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . payload execution = 86415 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . stage-out = 1 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,583 | INFO     | . log creation = 0 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,584 | INFO     | ..............................
[2026-01-27 23:52:46] 2026-01-27 22:52:05,664 | INFO     | 
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | job summary report
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | --------------------------------------------------
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | PanDA job id: 6983601784
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | task id: 48329261
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | errors: (none)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | pilot state: finished 
[2026-01-27 23:52:46] 2026-01-27 22:52:05,665 | INFO     | transexitcode: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | exeerrorcode: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | exeerrordiag: 
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | exitcode: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | exitmsg: OK
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | cpuconsumptiontime: 172140 s
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | nevents: 400
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | neventsw: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | pid: 634111
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | pgrp: 634111
[2026-01-27 23:52:46] 2026-01-27 22:52:05,666 | INFO     | corecount: 2
[2026-01-27 23:52:46] 2026-01-27 22:52:05,667 | INFO     | event service: False
[2026-01-27 23:52:46] 2026-01-27 22:52:05,667 | INFO     | sizes: {0: 2283930, 1: 2284391, 12: 2284391, 86424: 2348789, 86427: 2357801, 86430: 2357857, 86432: 2358179}
[2026-01-27 23:52:46] 2026-01-27 22:52:05,667 | INFO     | --------------------------------------------------
[2026-01-27 23:52:46] 2026-01-27 22:52:05,667 | INFO     | 
[2026-01-27 23:52:46] 2026-01-27 22:52:05,667 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-27 23:52:46] 2026-01-27 22:52:05,688 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,689 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,689 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,692 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 23:52:46] 2026-01-27 22:52:05,693 | INFO     | job 6983601784 has completed (purged errors)
[2026-01-27 23:52:46] 2026-01-27 22:52:05,693 | INFO     | overall cleanup function is called
[2026-01-27 23:52:46] 2026-01-27 22:52:06,702 | INFO     | --- collectZombieJob: --- 10, [634111]
[2026-01-27 23:52:46] 2026-01-27 22:52:06,702 | INFO     | zombie collector waiting for pid 634111
[2026-01-27 23:52:46] 2026-01-27 22:52:06,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 23:52:46] 2026-01-27 22:52:06,703 | INFO     | collected zombie processes
[2026-01-27 23:52:46] 2026-01-27 22:52:06,703 | INFO     | will attempt to kill all subprocesses of pid=634111
[2026-01-27 23:52:46] 2026-01-27 22:52:06,880 | INFO     | process IDs to be killed: [634111] (in reverse order)
[2026-01-27 23:52:46] 2026-01-27 22:52:06,930 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 23:52:46] 2026-01-27 22:52:06,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 23:52:46] 2026-01-27 22:52:06,934 | INFO     | did not find any defunct processes belonging to 634111
[2026-01-27 23:52:46] 2026-01-27 22:52:06,937 | INFO     | did not find any defunct processes belonging to 634111
[2026-01-27 23:52:46] 2026-01-27 22:52:06,938 | INFO     | ready for new job
[2026-01-27 23:52:46] 2026-01-27 22:52:06,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 23:52:46] 2026-01-27 22:52:06,942 | INFO     | **************************************
[2026-01-27 23:52:46] 2026-01-27 22:52:06,942 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 23:52:46] 2026-01-27 22:52:06,942 | INFO     | **************************************
[2026-01-27 23:52:46] 2026-01-27 22:52:06,942 | INFO     | 
[2026-01-27 23:52:46] 2026-01-27 22:52:06,943 | INFO     | architecture information:
[2026-01-27 23:52:46] 2026-01-27 22:52:06,944 | INFO     | executing command: cat /etc/os-release
[2026-01-27 23:52:46] 2026-01-27 22:52:06,956 | INFO     | cat /etc/os-release:
[2026-01-27 23:52:46] NAME="CentOS Linux"
[2026-01-27 23:52:46] VERSION="7 (Core)"
[2026-01-27 23:52:46] ID="centos"
[2026-01-27 23:52:46] ID_LIKE="rhel fedora"
[2026-01-27 23:52:46] VERSION_ID="7"
[2026-01-27 23:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 23:52:46] ANSI_COLOR="0;31"
[2026-01-27 23:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 23:52:46] HOME_URL="https://www.centos.org/"
[2026-01-27 23:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 23:52:46] 
[2026-01-27 23:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 23:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 23:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 23:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 23:52:46] 
[2026-01-27 23:52:46] 2026-01-27 22:52:06,956 | INFO     | **************************************
[2026-01-27 23:52:46] 2026-01-27 22:52:07,459 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-27 23:52:46] 2026-01-27 22:52:07,474 | INFO     | sufficient remaining disk space (27898413056 B)
[2026-01-27 23:52:46] 2026-01-27 22:52:07,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 23:52:46] 2026-01-27 22:52:07,475 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 23:52:46] 2026-01-27 22:52:07,476 | INFO     | update_server=False
[2026-01-27 23:52:46] 2026-01-27 22:52:07,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 23:52:46] 2026-01-27 22:52:07,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:52:46] 2026-01-27 22:52:07,476 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 23:52:46] 2026-01-27 22:52:07,477 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 23:52:46] 2026-01-27 22:52:07,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 23:52:46] 2026-01-27 22:52:07,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 23:52:46] 2026-01-27 22:52:07,662 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 23:52:46] 2026-01-27 22:52:07,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 23:52:46] 2026-01-27 22:52:07,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:52:46] 2026-01-27 22:52:07,675 | INFO     | will abort loop
[2026-01-27 23:52:46] 2026-01-27 22:52:07,755 | INFO     | all job control threads have been joined
[2026-01-27 23:52:46] 2026-01-27 22:52:08,339 | INFO     | all data control threads have been joined
[2026-01-27 23:52:46] 2026-01-27 22:52:08,482 | INFO     | [job] retrieve thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,482 | INFO     | [job] queue monitor thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,681 | INFO     | [job] job monitor thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,715 | INFO     | [payload] validate_post thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,759 | INFO     | [job] control thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,811 | INFO     | [payload] failed_post thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 23:52:46] 2026-01-27 22:52:08,940 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:08,953 | INFO     | all payload control threads have been joined
[2026-01-27 23:52:46] 2026-01-27 22:52:09,343 | INFO     | [data] control thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:09,450 | INFO     | [data] copytool_in thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:09,502 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:09,901 | INFO     | [job] validate thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:09,903 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:09,959 | INFO     | [payload] control thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:10,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 23:52:46] 2026-01-27 22:52:10,935 | INFO     | [data] copytool_out thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:14,291 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:18,485 | INFO     | job.realtimelogging is not enabled
[2026-01-27 23:52:46] 2026-01-27 22:52:19,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 23:52:46] 2026-01-27 22:52:40,543 | INFO     | [monitor] cgroup control has ended
[2026-01-27 23:52:46] 2026-01-27 22:52:41,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984539273024)>', '<ExcThread(monitor, started 139983780308736)>']
[2026-01-27 23:52:46] 2026-01-27 22:52:41,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 23:52:46] 2026-01-27 22:52:41,645 | INFO     | [monitor] control thread has ended
[2026-01-27 23:52:46] 2026-01-27 22:52:46,575 | INFO     | all workflow threads have been joined
[2026-01-27 23:52:46] 2026-01-27 22:52:46,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 23:52:46] 2026-01-27 22:52:46,576 | INFO     | traces error code: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:46,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 23:52:46] 2026-01-27 22:52:46,683 [wrapper] ==== pilot stdout END ====
[2026-01-27 23:52:46] 2026-01-27 22:52:46,688 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 23:52:46] 2026-01-27 22:52:46,691 [wrapper] pilotpid: 629583
[2026-01-27 23:52:46] 2026-01-27 22:52:46,695 [wrapper] Pilot exit status: 0
[2026-01-27 23:52:46] 2026-01-27 22:52:46,707 [wrapper] pandaids: 6983601784
[2026-01-27 23:52:46] 2026-01-27 22:52:46,739 [wrapper] cleanup supervisor_pilot 1002091 629584
[2026-01-27 23:52:46] 2026-01-27 22:52:46,742 [wrapper] Test setup, not cleaning
[2026-01-27 23:52:46] 2026-01-27 22:52:46,745 [wrapper] apfmon messages muted
[2026-01-27 23:52:46] 2026-01-27 22:52:46,748 [wrapper] ==== wrapper stdout END ====
[2026-01-27 23:52:46] 2026-01-27 22:52:46,751 [wrapper] ==== wrapper stderr END ====
[2026-01-27 23:52:46]  *** Error codes and diagnostics ***
[2026-01-27 23:52:46]     "exeErrorCode": 0,
[2026-01-27 23:52:46]     "exeErrorDiag": "",
[2026-01-27 23:52:46]     "pilotErrorCode": 0,
[2026-01-27 23:52:46]     "pilotErrorDiag": "",
[2026-01-27 23:52:46]  *** Listing of results directory ***
[2026-01-27 23:52:46] total 492168
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc    584422 25 janv. 23:54 pilot3.tar.gz
[2026-01-27 23:52:46] -rwx------ 1 boinc boinc     36322 25 janv. 23:54 runpilot2-wrapper.sh
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc      5111 25 janv. 23:56 queuedata.json
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc       100 26 janv. 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 23:52:46] -rwxr-xr-x 1 boinc boinc      7986 26 janv. 23:51 run_atlas
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc       105 26 janv. 23:51 job.xml
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc      6352 26 janv. 23:51 init_data.xml
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc 265271899 26 janv. 23:51 EVNT.48329259._000003.pool.root.1
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc     15845 26 janv. 23:51 start_atlas.sh
[2026-01-27 23:52:46] drwxrwx--x 2 boinc boinc      4096 26 janv. 23:51 shared
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc    597771 26 janv. 23:51 input.tar.gz
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc         0 26 janv. 23:51 boinc_lockfile
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc      2606 26 janv. 23:51 pandaJob.out
[2026-01-27 23:52:46] -rw------- 1 boinc boinc        52 26 janv. 23:51 setup.sh.local
[2026-01-27 23:52:46] -rw------- 1 boinc boinc   1006433 26 janv. 23:51 agis_schedconf.cvmfs.json
[2026-01-27 23:52:46] -rw------- 1 boinc boinc       419 26 janv. 23:51 workernode_map.json
[2026-01-27 23:52:46] drwx------ 5 boinc boinc      4096 26 janv. 23:51 pilot3
[2026-01-27 23:52:46] -rw------- 1 boinc boinc        95 27 janv. 23:51 pilot_heartbeat.json
[2026-01-27 23:52:46] -rw------- 1 boinc boinc 208039015 27 janv. 23:51 HITS.48329261._000056.pool.root.1
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc       531 27 janv. 23:51 boinc_task_state.xml
[2026-01-27 23:52:46] -rw------- 1 boinc boinc      1031 27 janv. 23:51 memory_monitor_summary.json
[2026-01-27 23:52:46] -rw------- 1 boinc boinc   1516246 27 janv. 23:52 agis_ddmendpoints.agis.ALL.json
[2026-01-27 23:52:46] -rw------- 1 boinc boinc   1331525 27 janv. 23:52 log.48329261._000056.job.log.tgz.1
[2026-01-27 23:52:46] -rw------- 1 boinc boinc      6300 27 janv. 23:52 heartbeat.json
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc        29 27 janv. 23:52 wrapper_checkpoint.txt
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc      8192 27 janv. 23:52 boinc_mmap_file
[2026-01-27 23:52:46] -rw------- 1 boinc boinc      4813 27 janv. 23:52 pilotlog.txt
[2026-01-27 23:52:46] -rw------- 1 boinc boinc  12025140 27 janv. 23:52 log.48329261._000056.job.log.1
[2026-01-27 23:52:46] -rw------- 1 boinc boinc       357 27 janv. 23:52 output.list
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc       620 27 janv. 23:52 runtime_log
[2026-01-27 23:52:46] -rw------- 1 boinc boinc  13373440 27 janv. 23:52 result.tar.gz
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc      9413 27 janv. 23:52 runtime_log.err
[2026-01-27 23:52:46] -rw------- 1 boinc boinc       650 27 janv. 23:52 EMTMDmQBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwX8KDmmQsfbm.diag
[2026-01-27 23:52:46] -rw-r--r-- 1 boinc boinc     20936 27 janv. 23:52 stderr.txt
[2026-01-27 23:52:46] HITS file was successfully produced:
[2026-01-27 23:52:46] -rw------- 1 boinc boinc 208039015 27 janv. 23:51 shared/HITS.pool.root.1
[2026-01-27 23:52:46]  *** Contents of shared directory: ***
[2026-01-27 23:52:46] total 475888
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc 265271899 26 janv. 23:51 ATLAS.root_0
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc     15845 26 janv. 23:51 start_atlas.sh
[2026-01-27 23:52:46] -rw-r--r-- 2 boinc boinc    597771 26 janv. 23:51 input.tar.gz
[2026-01-27 23:52:46] -rw------- 1 boinc boinc 208039015 27 janv. 23:51 HITS.pool.root.1
[2026-01-27 23:52:46] -rw------- 1 boinc boinc  13373440 27 janv. 23:52 result.tar.gz
23:52:47 (625432): run_atlas exited; CPU time 174486.456107
23:52:47 (625432): called boinc_finish(0)

</stderr_txt>
]]>

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