Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:14 (1844377): wrapper (7.7.26015): starting
13:52:14 (1844377): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 13:52:14] Arguments: --nthreads 4
[2026-01-28 13:52:14] Threads: 4
[2026-01-28 13:52:14] Checking for CVMFS
[2026-01-28 13:52:14] No cvmfs_config command found, will try listing directly
[2026-01-28 13:52:14] CVMFS is ok
[2026-01-28 13:52:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 13:52:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 13:52:14] Further information can be found at the LHC@home message board.
[2026-01-28 13:52:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 13:52:14] Checking for apptainer binary...
[2026-01-28 13:52:14] which: no apptainer in ((null))
[2026-01-28 13:52:14] apptainer is not installed, using version from CVMFS
[2026-01-28 13:52:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 13:52:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-28 13:52:14] apptainer works
[2026-01-28 13:52:14] Set ATHENA_PROC_NUMBER=4
[2026-01-28 13:52:14] Set ATHENA_CORE_NUMBER=4
[2026-01-28 13:52:14] Starting ATLAS job with PandaID=6983772157
[2026-01-28 13:52:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 16:51:40]  *** The last 200 lines of the pilot log: ***
[2026-01-28 16:51:40] 2026-01-28 15:35:12,852 | INFO     | total number of processed events: 400 (read)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,876 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6983772157/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,876 | INFO     | extracted standard info from prmon json
[2026-01-28 16:51:40] 2026-01-28 15:35:12,876 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 16:51:40] 2026-01-28 15:35:12,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 16:51:40] 2026-01-28 15:35:12,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 16:51:40] 2026-01-28 15:35:12,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 16:51:40] 2026-01-28 15:35:12,880 | INFO     | fitting pss+swap vs Time
[2026-01-28 16:51:40] 2026-01-28 15:35:12,880 | INFO     | sum of square deviations: 1270051720.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,881 | INFO     | sum of deviations: 14294993119.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,881 | INFO     | mean x: 1769609632.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,881 | INFO     | mean y: 2354754.89375
[2026-01-28 16:51:40] 2026-01-28 15:35:12,881 | INFO     | intersect: -19915383335.952206
[2026-01-28 16:51:40] 2026-01-28 15:35:12,882 | INFO     | chi2: 2.1637017219215613
[2026-01-28 16:51:40] 2026-01-28 15:35:12,882 | INFO     | sum of square deviations: 1154663510.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | sum of deviations: 24127733698.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | mean x: 1769609480.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | mean y: 2367403.212903226
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | intersect: -36975216033.97067
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | chi2: 1.3443941663077796
[2026-01-28 16:51:40] 2026-01-28 15:35:12,883 | INFO     | current chi2=1.3443941663077796 (change=37.86601208997343 %)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,884 | INFO     | sum of square deviations: 1046484737.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | sum of deviations: 23377195462.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | mean x: 1769609327.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | mean y: 2366342.006666667
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | intersect: -39528552417.55209
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | chi2: 1.3448958480626865
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | current chi2=1.3448958480626865 (change=-0.037316567378795254 %)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,885 | INFO     | right removable region: 149
[2026-01-28 16:51:40] 2026-01-28 15:35:12,886 | INFO     | sum of square deviations: 1154663510.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,886 | INFO     | sum of deviations: -6496527023.000001
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | mean x: 1769609785.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | mean y: 2381784.7419354836
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | intersect: 9958804317.24036
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | chi2: 0.8461646705489343
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | current chi2=0.8461646705489343 (change=60.89273017736178 %)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,887 | INFO     | sum of square deviations: 1046484737.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,888 | INFO     | sum of deviations: -7216277674.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,888 | INFO     | mean x: 1769609937.5
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | mean y: 2382794.986666667
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | intersect: 12205137623.668327
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | chi2: 0.845658237798874
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | current chi2=0.845658237798874 (change=0.05985037755497508 %)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | left removable region: 20
[2026-01-28 16:51:40] 2026-01-28 15:35:12,889 | INFO     | sum of square deviations: 665612480.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,890 | INFO     | sum of deviations: 1756684588.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,890 | INFO     | mean x: 1769609907.0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,890 | INFO     | mean y: 2398734.1860465114
[2026-01-28 16:51:40] 2026-01-28 15:35:12,890 | INFO     | intersect: -4667956080.073165
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | chi2: 0.0010272218548240768
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | current memory leak: 2.64 B/s (using 129 data points, chi2=0.00)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | could have reported an average CPU frequency of 2716 MHz (9 samples)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | ..............................
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | . Timing measurements:
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | . get job = 0 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,891 | INFO     | . initial setup = 8 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | . payload setup = 9 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | . stage-in = 0 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | . payload execution = 9729 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | . stage-out = 1 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | . log creation = 0 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,892 | INFO     | ..............................
[2026-01-28 16:51:40] 2026-01-28 15:35:12,981 | INFO     | 
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | job summary report
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | --------------------------------------------------
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | PanDA job id: 6983772157
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | task id: 48318034
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | errors: (none)
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | pilot state: finished 
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | transexitcode: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,982 | INFO     | exeerrorcode: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | exeerrordiag: 
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | exitcode: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | exitmsg: OK
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | cpuconsumptiontime: 37946 s
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | nevents: 400
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | neventsw: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | pid: 1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | pgrp: 1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | corecount: 4
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | event service: False
[2026-01-28 16:51:40] 2026-01-28 15:35:12,983 | INFO     | sizes: {0: 2283776, 1: 2284237, 11: 2284237, 9742: 2313223, 9744: 2322301, 9746: 2322503}
[2026-01-28 16:51:40] 2026-01-28 15:35:12,984 | INFO     | --------------------------------------------------
[2026-01-28 16:51:40] 2026-01-28 15:35:12,984 | INFO     | 
[2026-01-28 16:51:40] 2026-01-28 15:35:12,984 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2026-01-28 16:51:40] 2026-01-28 15:35:13,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | job 6983772157 has completed (purged errors)
[2026-01-28 16:51:40] 2026-01-28 15:35:13,018 | INFO     | overall cleanup function is called
[2026-01-28 16:51:40] 2026-01-28 15:35:14,028 | INFO     | --- collectZombieJob: --- 10, [1853445]
[2026-01-28 16:51:40] 2026-01-28 15:35:14,028 | INFO     | zombie collector waiting for pid 1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:14,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 16:51:40] 2026-01-28 15:35:14,029 | INFO     | collected zombie processes
[2026-01-28 16:51:40] 2026-01-28 15:35:14,029 | INFO     | will attempt to kill all subprocesses of pid=1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:14,791 | INFO     | process IDs to be killed: [1853445] (in reverse order)
[2026-01-28 16:51:40] 2026-01-28 15:35:15,032 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 16:51:40] 2026-01-28 15:35:15,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 16:51:40] 2026-01-28 15:35:15,064 | INFO     | did not find any defunct processes belonging to 1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:15,093 | INFO     | did not find any defunct processes belonging to 1853445
[2026-01-28 16:51:40] 2026-01-28 15:35:15,093 | INFO     | ready for new job
[2026-01-28 16:51:40] 2026-01-28 15:35:15,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 16:51:40] 2026-01-28 15:35:15,095 | INFO     | **************************************
[2026-01-28 16:51:40] 2026-01-28 15:35:15,095 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 16:51:40] 2026-01-28 15:35:15,096 | INFO     | **************************************
[2026-01-28 16:51:40] 2026-01-28 15:35:15,096 | INFO     | 
[2026-01-28 16:51:40] 2026-01-28 15:35:15,104 | INFO     | architecture information:
[2026-01-28 16:51:40] 2026-01-28 15:35:15,104 | INFO     | executing command: cat /etc/os-release
[2026-01-28 16:51:40] 2026-01-28 15:35:15,133 | INFO     | cat /etc/os-release:
[2026-01-28 16:51:40] NAME="CentOS Linux"
[2026-01-28 16:51:40] VERSION="7 (Core)"
[2026-01-28 16:51:40] ID="centos"
[2026-01-28 16:51:40] ID_LIKE="rhel fedora"
[2026-01-28 16:51:40] VERSION_ID="7"
[2026-01-28 16:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 16:51:40] ANSI_COLOR="0;31"
[2026-01-28 16:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 16:51:40] HOME_URL="https://www.centos.org/"
[2026-01-28 16:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 16:51:40] 
[2026-01-28 16:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 16:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 16:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 16:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 16:51:40] 
[2026-01-28 16:51:40] 2026-01-28 15:35:15,134 | INFO     | **************************************
[2026-01-28 16:51:40] 2026-01-28 15:35:15,637 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-28 16:51:40] 2026-01-28 15:35:15,661 | INFO     | sufficient remaining disk space (3287315120128 B)
[2026-01-28 16:51:40] 2026-01-28 15:35:15,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 16:51:40] 2026-01-28 15:35:15,661 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 16:51:40] 2026-01-28 15:35:15,662 | INFO     | update_server=False
[2026-01-28 16:51:40] 2026-01-28 15:35:15,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 16:51:40] 2026-01-28 15:35:15,731 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 16:51:40] 2026-01-28 15:35:15,731 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 16:51:40] 2026-01-28 15:35:15,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 16:51:40] 2026-01-28 15:35:15,731 | INFO     | will abort loop
[2026-01-28 16:51:40] 2026-01-28 15:35:15,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 16:51:40] 2026-01-28 15:35:16,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 16:51:40] 2026-01-28 15:35:16,649 | INFO     | all data control threads have been joined
[2026-01-28 16:51:40] 2026-01-28 15:35:16,667 | INFO     | [job] retrieve thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:16,691 | INFO     | [payload] validate_post thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:16,734 | INFO     | [payload] failed_post thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:16,736 | INFO     | [job] job monitor thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:16,792 | INFO     | all payload control threads have been joined
[2026-01-28 16:51:40] 2026-01-28 15:35:16,894 | INFO     | all job control threads have been joined
[2026-01-28 16:51:40] 2026-01-28 15:35:17,068 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,071 | INFO     | [data] copytool_in thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,185 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,610 | INFO     | [job] validate thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,654 | INFO     | [data] control thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,669 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,798 | INFO     | [payload] control thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,900 | INFO     | [job] control thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:17,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 16:51:40] 2026-01-28 15:35:17,992 | INFO     | [data] copytool_out thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:18,998 | INFO     | [job] queue monitor thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:20,592 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:26,501 | INFO     | job.realtimelogging is not enabled
[2026-01-28 16:51:40] 2026-01-28 15:35:27,506 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 16:51:40] 2026-01-28 15:35:46,503 | INFO     | PID=1848400 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 16:51:40] 2026-01-28 15:35:46,506 | INFO     | .. there are 7 such processes running
[2026-01-28 16:51:40] 2026-01-28 15:35:46,506 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 16:51:40] 2026-01-28 15:35:46,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 16:51:40] 2026-01-28 15:35:46,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 16:51:40] 2026-01-28 15:35:50,715 | INFO     | [monitor] cgroup control has ended
[2026-01-28 16:51:40] 2026-01-28 15:35:52,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23379302909760)>', '<ExcThread(monitor, started 23379053897472)>']
[2026-01-28 16:51:40] 2026-01-28 15:35:53,539 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 16:51:40] 2026-01-28 15:35:53,540 | INFO     | [monitor] control thread has ended
[2026-01-28 16:51:40] 2026-01-28 15:35:57,661 | INFO     | all workflow threads have been joined
[2026-01-28 16:51:40] 2026-01-28 15:35:57,661 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 16:51:40] 2026-01-28 15:35:57,662 | INFO     | traces error code: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:57,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 16:51:40] 2026-01-28 15:35:57,797 [wrapper] ==== pilot stdout END ====
[2026-01-28 16:51:40] 2026-01-28 15:35:57,801 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 16:51:40] 2026-01-28 15:35:57,806 [wrapper] pilotpid: 1848400
[2026-01-28 16:51:40] 2026-01-28 15:35:57,809 [wrapper] Pilot exit status: 0
[2026-01-28 16:51:40] 2026-01-28 15:35:57,824 [wrapper] pandaids: 6983772157
[2026-01-28 16:51:40] 2026-01-28 15:35:58,004 [wrapper] cleanup supervisor_pilot 2001993 1848401
[2026-01-28 16:51:40] 2026-01-28 15:35:58,009 [wrapper] Test setup, not cleaning
[2026-01-28 16:51:40] 2026-01-28 15:35:58,012 [wrapper] apfmon messages muted
[2026-01-28 16:51:40] 2026-01-28 15:35:58,017 [wrapper] ==== wrapper stdout END ====
[2026-01-28 16:51:40] 2026-01-28 15:35:58,021 [wrapper] ==== wrapper stderr END ====
[2026-01-28 16:51:40]  *** Error codes and diagnostics ***
[2026-01-28 16:51:40]     "exeErrorCode": 0,
[2026-01-28 16:51:40]     "exeErrorDiag": "",
[2026-01-28 16:51:40]     "pilotErrorCode": 0,
[2026-01-28 16:51:40]     "pilotErrorDiag": "",
[2026-01-28 16:51:40]  *** Listing of results directory ***
[2026-01-28 16:51:40] total 674744
[2026-01-28 16:51:40] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:19 queuedata.json
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc       100 Jan 28 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 16:51:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 13:52 run_atlas
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc       105 Jan 28 13:52 job.xml
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc 501734180 Jan 28 13:52 EVNT.48318032._000062.pool.root.1
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc      6692 Jan 28 13:52 init_data.xml
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc     15845 Jan 28 13:52 start_atlas.sh
[2026-01-28 16:51:40] drwxrwx--x 2 boinc boinc      4096 Jan 28 13:52 shared
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc    597756 Jan 28 13:52 input.tar.gz
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc         0 Jan 28 13:52 boinc_lockfile
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc      2531 Jan 28 13:52 pandaJob.out
[2026-01-28 16:51:40] -rw------- 1 boinc boinc   1005192 Jan 28 13:52 agis_schedconf.cvmfs.json
[2026-01-28 16:51:40] -rw------- 1 boinc boinc   1516246 Jan 28 13:52 agis_ddmendpoints.agis.ALL.json
[2026-01-28 16:51:40] -rw------- 1 boinc boinc       444 Jan 28 13:52 workernode_map.json
[2026-01-28 16:51:40] drwx------ 5 boinc boinc      4096 Jan 28 13:52 pilot3
[2026-01-28 16:51:40] -rw------- 1 boinc boinc 181893052 Jan 28 16:34 HITS.48318034._002402.pool.root.1
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc       529 Jan 28 16:34 boinc_task_state.xml
[2026-01-28 16:51:40] -rw------- 1 boinc boinc        95 Jan 28 16:34 pilot_heartbeat.json
[2026-01-28 16:51:40] -rw------- 1 boinc boinc      1031 Jan 28 16:35 memory_monitor_summary.json
[2026-01-28 16:51:40] -rw------- 1 boinc boinc    321394 Jan 28 16:35 log.48318034._002402.job.log.tgz.1
[2026-01-28 16:51:40] -rw------- 1 boinc boinc      6352 Jan 28 16:35 heartbeat.json
[2026-01-28 16:51:40] -rw------- 1 boinc boinc      5090 Jan 28 16:35 pilotlog.txt
[2026-01-28 16:51:40] -rw------- 1 boinc boinc   1364651 Jan 28 16:35 log.48318034._002402.job.log.1
[2026-01-28 16:51:40] -rw------- 1 boinc boinc       357 Jan 28 16:35 output.list
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc       620 Jan 28 16:35 runtime_log
[2026-01-28 16:51:40] -rw------- 1 boinc boinc   1699840 Jan 28 16:35 result.tar.gz
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc      9221 Jan 28 16:35 runtime_log.err
[2026-01-28 16:51:40] -rw------- 1 boinc boinc       660 Jan 28 16:35 hn8NDm7HS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9v8KDm3YsZOm.diag
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc        27 Jan 28 16:51 wrapper_checkpoint.txt
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc      8192 Jan 28 16:51 boinc_mmap_file
[2026-01-28 16:51:40] -rw-r--r-- 1 boinc boinc     20795 Jan 28 16:51 stderr.txt
[2026-01-28 16:51:40] HITS file was successfully produced:
[2026-01-28 16:51:40] -rw------- 1 boinc boinc 181893052 Jan 28 16:34 shared/HITS.pool.root.1
[2026-01-28 16:51:40]  *** Contents of shared directory: ***
[2026-01-28 16:51:40] total 669876
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc 501734180 Jan 28 13:52 ATLAS.root_0
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc     15845 Jan 28 13:52 start_atlas.sh
[2026-01-28 16:51:40] -rw-r--r-- 2 boinc boinc    597756 Jan 28 13:52 input.tar.gz
[2026-01-28 16:51:40] -rw------- 1 boinc boinc 181893052 Jan 28 16:34 HITS.pool.root.1
[2026-01-28 16:51:40] -rw------- 1 boinc boinc   1699840 Jan 28 16:35 result.tar.gz
16:51:41 (1844377): run_atlas exited; CPU time 38607.118289
16:51:41 (1844377): called boinc_finish(0)

</stderr_txt>
]]>

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