Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
15:03:58 (440560): wrapper (7.7.26015): starting
15:03:58 (440560): wrapper: running run_atlas (--nthreads 2)
[2026-01-26 15:03:58] Arguments: --nthreads 2
[2026-01-26 15:03:58] Threads: 2
[2026-01-26 15:03:58] Checking for CVMFS
[2026-01-26 15:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:04:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:04:02] 2.13.3.0 440795 0 29920 155548 3 1 5115881 6144000 0 130560 0 0 0.000 1336 2061 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.2.1:3128 1
[2026-01-26 15:04:02] CVMFS is ok
[2026-01-26 15:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:04:02] Checking for apptainer binary...
[2026-01-26 15:04:02] apptainer is not installed, using version from CVMFS
[2026-01-26 15:04:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:04:03] pitot
[2026-01-26 15:04:03] apptainer works
[2026-01-26 15:04:04] Set ATHENA_PROC_NUMBER=2
[2026-01-26 15:04:04] Set ATHENA_CORE_NUMBER=2
[2026-01-26 15:04:04] Starting ATLAS job with PandaID=6982976600
[2026-01-26 15:04:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:32:35]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:32:35] 2026-01-26 23:32:00,914 | INFO     | mean y: 2255503.577060932
[2026-01-27 00:32:35] 2026-01-26 23:32:00,914 | INFO     | intersect: -4045141385.7788568
[2026-01-27 00:32:35] 2026-01-26 23:32:00,915 | INFO     | chi2: 1.4723069776173414
[2026-01-27 00:32:35] 2026-01-26 23:32:00,916 | INFO     | sum of square deviations: 52438758092.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,928 | INFO     | sum of deviations: 121720869855.99997
[2026-01-27 00:32:35] 2026-01-26 23:32:00,928 | INFO     | monitor loop #2528: job 0:6982976600 is in state 'finished'
[2026-01-27 00:32:35] 2026-01-26 23:32:00,928 | INFO     | mean x: 1769453130.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,928 | INFO     | mean y: 2255343.231464738
[2026-01-27 00:32:35] 2026-01-26 23:32:00,929 | INFO     | intersect: -4105000091.2918754
[2026-01-27 00:32:35] 2026-01-26 23:32:00,930 | INFO     | chi2: 1.4723499108250147
[2026-01-27 00:32:35] 2026-01-26 23:32:00,930 | INFO     | current chi2=1.4723499108250147 (change=-0.0029160500035606864 %)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,930 | INFO     | right removable region: 552
[2026-01-27 00:32:35] 2026-01-26 23:32:00,931 | INFO     | sum of square deviations: 52438758092.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,942 | INFO     | sum of deviations: 49953872827.99999
[2026-01-27 00:32:35] 2026-01-26 23:32:00,942 | INFO     | mean x: 1769453435.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,943 | INFO     | mean y: 2263251.840867993
[2026-01-27 00:32:35] 2026-01-26 23:32:00,943 | INFO     | intersect: -1683342111.123336
[2026-01-27 00:32:35] 2026-01-26 23:32:00,944 | INFO     | chi2: 0.014509718876281545
[2026-01-27 00:32:35] 2026-01-26 23:32:00,944 | INFO     | current chi2=0.014509718876281545 (change=99.0144909249997 %)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,945 | INFO     | sum of square deviations: 51029187477.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,956 | INFO     | sum of deviations: 55296607390.500015
[2026-01-27 00:32:35] 2026-01-26 23:32:00,956 | INFO     | mean x: 1769453587.5
[2026-01-27 00:32:35] 2026-01-26 23:32:00,956 | INFO     | mean y: 2262672.666058394
[2026-01-27 00:32:35] 2026-01-26 23:32:00,957 | INFO     | intersect: -1915165081.1620836
[2026-01-27 00:32:35] 2026-01-26 23:32:00,958 | INFO     | chi2: 0.007335275613317297
[2026-01-27 00:32:35] 2026-01-26 23:32:00,958 | INFO     | current chi2=0.007335275613317297 (change=49.44577716589687 %)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,959 | INFO     | sum of square deviations: 49645105712.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,969 | INFO     | sum of deviations: 54337945938.99999
[2026-01-27 00:32:35] 2026-01-26 23:32:00,970 | INFO     | mean x: 1769453740.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,970 | INFO     | mean y: 2262779.983425414
[2026-01-27 00:32:35] 2026-01-26 23:32:00,970 | INFO     | intersect: -1934453443.8364134
[2026-01-27 00:32:35] 2026-01-26 23:32:00,971 | INFO     | chi2: 0.004403993341599509
[2026-01-27 00:32:35] 2026-01-26 23:32:00,971 | INFO     | time since job start (34046s) is within the limit (349056.0s)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,971 | INFO     | current chi2=0.004403993341599509 (change=39.96144693453649 %)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,973 | INFO     | sum of square deviations: 48286280234.5
[2026-01-27 00:32:35] 2026-01-26 23:32:00,983 | INFO     | sum of deviations: 51278957863.5
[2026-01-27 00:32:35] 2026-01-26 23:32:00,983 | INFO     | mean x: 1769453892.5
[2026-01-27 00:32:35] 2026-01-26 23:32:00,983 | INFO     | mean y: 2263123.2955390336
[2026-01-27 00:32:35] 2026-01-26 23:32:00,984 | INFO     | intersect: -1876857636.3541944
[2026-01-27 00:32:35] 2026-01-26 23:32:00,984 | INFO     | chi2: 0.004034267621340587
[2026-01-27 00:32:35] 2026-01-26 23:32:00,985 | INFO     | current chi2=0.004034267621340587 (change=8.395237948398892 %)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,985 | INFO     | left removable region: 40
[2026-01-27 00:32:35] 2026-01-26 23:32:00,986 | INFO     | sum of square deviations: 41618521728.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,995 | INFO     | sum of deviations: 40587021244.0
[2026-01-27 00:32:35] 2026-01-26 23:32:00,995 | INFO     | mean x: 1769454319.5
[2026-01-27 00:32:35] 2026-01-26 23:32:00,996 | INFO     | mean y: 2264172.453125
[2026-01-27 00:32:35] 2026-01-26 23:32:00,996 | INFO     | intersect: -1723334841.495448
[2026-01-27 00:32:35] 2026-01-26 23:32:00,997 | INFO     | chi2: 0.0031169759514288915
[2026-01-27 00:32:35] 2026-01-26 23:32:00,997 | INFO     | current memory leak: 0.98 B/s (using 512 data points, chi2=0.00)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,998 | INFO     | could have reported an average CPU frequency of 2799 MHz (22 samples)
[2026-01-27 00:32:35] 2026-01-26 23:32:00,998 | INFO     | ..............................
[2026-01-27 00:32:35] 2026-01-26 23:32:00,998 | INFO     | . Timing measurements:
[2026-01-27 00:32:35] 2026-01-26 23:32:00,998 | INFO     | . get job = 0 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,998 | INFO     | . initial setup = 16 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | . payload setup = 4 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | . stage-in = 0 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | . payload execution = 34023 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | . stage-out = 1 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | . log creation = 0 s
[2026-01-27 00:32:35] 2026-01-26 23:32:00,999 | INFO     | ..............................
[2026-01-27 00:32:35] 2026-01-26 23:32:01,080 | INFO     | 
[2026-01-27 00:32:35] 2026-01-26 23:32:01,080 | INFO     | job summary report
[2026-01-27 00:32:35] 2026-01-26 23:32:01,080 | INFO     | --------------------------------------------------
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | PanDA job id: 6982976600
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | task id: 48329053
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | errors: (none)
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | pilot state: finished 
[2026-01-27 00:32:35] 2026-01-26 23:32:01,081 | INFO     | transexitcode: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | exeerrorcode: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | exeerrordiag: 
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | exitcode: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | exitmsg: OK
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | cpuconsumptiontime: 67533 s
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | nevents: 400
[2026-01-27 00:32:35] 2026-01-26 23:32:01,082 | INFO     | neventsw: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | pid: 468182
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | pgrp: 468182
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | corecount: 2
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | event service: False
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | sizes: {0: 2283941, 1: 2284402, 12: 2284402, 34031: 2324356, 34033: 2333370, 34034: 2333426, 34035: 2333748}
[2026-01-27 00:32:35] 2026-01-26 23:32:01,083 | INFO     | --------------------------------------------------
[2026-01-27 00:32:35] 2026-01-26 23:32:01,084 | INFO     | 
[2026-01-27 00:32:35] 2026-01-26 23:32:01,084 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2026-01-27 00:32:35] 2026-01-26 23:32:01,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,100 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,100 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,103 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:32:35] 2026-01-26 23:32:01,103 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,103 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:32:35] 2026-01-26 23:32:01,104 | INFO     | job 6982976600 has completed (purged errors)
[2026-01-27 00:32:35] 2026-01-26 23:32:01,104 | INFO     | overall cleanup function is called
[2026-01-27 00:32:35] 2026-01-26 23:32:02,111 | INFO     | --- collectZombieJob: --- 10, [468182]
[2026-01-27 00:32:35] 2026-01-26 23:32:02,111 | INFO     | zombie collector waiting for pid 468182
[2026-01-27 00:32:35] 2026-01-26 23:32:02,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:32:35] 2026-01-26 23:32:02,112 | INFO     | collected zombie processes
[2026-01-27 00:32:35] 2026-01-26 23:32:02,112 | INFO     | will attempt to kill all subprocesses of pid=468182
[2026-01-27 00:32:35] 2026-01-26 23:32:02,357 | INFO     | PID=448781 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:32:35] 2026-01-26 23:32:02,357 | INFO     | .. there are 4 such processes running
[2026-01-27 00:32:35] 2026-01-26 23:32:02,437 | INFO     | process IDs to be killed: [468182] (in reverse order)
[2026-01-27 00:32:35] 2026-01-26 23:32:02,497 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:32:35] 2026-01-26 23:32:02,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:32:35] 2026-01-26 23:32:02,504 | INFO     | did not find any defunct processes belonging to 468182
[2026-01-27 00:32:35] 2026-01-26 23:32:02,511 | INFO     | did not find any defunct processes belonging to 468182
[2026-01-27 00:32:35] 2026-01-26 23:32:02,511 | INFO     | ready for new job
[2026-01-27 00:32:35] 2026-01-26 23:32:02,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:32:35] 2026-01-26 23:32:02,514 | INFO     | **************************************
[2026-01-27 00:32:35] 2026-01-26 23:32:02,514 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:32:35] 2026-01-26 23:32:02,515 | INFO     | **************************************
[2026-01-27 00:32:35] 2026-01-26 23:32:02,515 | INFO     | 
[2026-01-27 00:32:35] 2026-01-26 23:32:02,516 | INFO     | architecture information:
[2026-01-27 00:32:35] 2026-01-26 23:32:02,516 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:32:35] 2026-01-26 23:32:02,528 | INFO     | cat /etc/os-release:
[2026-01-27 00:32:35] NAME="CentOS Linux"
[2026-01-27 00:32:35] VERSION="7 (Core)"
[2026-01-27 00:32:35] ID="centos"
[2026-01-27 00:32:35] ID_LIKE="rhel fedora"
[2026-01-27 00:32:35] VERSION_ID="7"
[2026-01-27 00:32:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:32:35] ANSI_COLOR="0;31"
[2026-01-27 00:32:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:32:35] HOME_URL="https://www.centos.org/"
[2026-01-27 00:32:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:32:35] 
[2026-01-27 00:32:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:32:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:32:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:32:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:32:35] 
[2026-01-27 00:32:35] 2026-01-26 23:32:02,528 | INFO     | **************************************
[2026-01-27 00:32:35] 2026-01-26 23:32:03,031 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2026-01-27 00:32:35] 2026-01-26 23:32:03,045 | INFO     | sufficient remaining disk space (24074256384 B)
[2026-01-27 00:32:35] 2026-01-26 23:32:03,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:32:35] 2026-01-26 23:32:03,046 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:32:35] 2026-01-26 23:32:03,046 | INFO     | update_server=False
[2026-01-27 00:32:35] 2026-01-26 23:32:03,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:32:35] 2026-01-26 23:32:03,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:32:35] 2026-01-26 23:32:03,047 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 00:32:35] 2026-01-26 23:32:03,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:32:35] 2026-01-26 23:32:03,047 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:32:35] 2026-01-26 23:32:03,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:32:35] 2026-01-26 23:32:03,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:32:35] 2026-01-26 23:32:03,187 | INFO     | all payload control threads have been joined
[2026-01-27 00:32:35] 2026-01-26 23:32:03,431 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 00:32:35] 2026-01-26 23:32:03,431 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 00:32:35] 2026-01-26 23:32:03,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:32:35] 2026-01-26 23:32:03,432 | INFO     | will abort loop
[2026-01-27 00:32:35] 2026-01-26 23:32:03,831 | INFO     | all data control threads have been joined
[2026-01-27 00:32:35] 2026-01-26 23:32:03,986 | INFO     | all job control threads have been joined
[2026-01-27 00:32:35] 2026-01-26 23:32:04,052 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,052 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,192 | INFO     | [payload] control thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,242 | INFO     | [job] validate thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,279 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,435 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,579 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,615 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,748 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,836 | INFO     | [data] control thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:04,991 | INFO     | [job] control thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:05,051 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:05,123 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:05,499 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:05,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:32:35] 2026-01-26 23:32:09,583 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:13,287 | INFO     | job.realtimelogging is not enabled
[2026-01-27 00:32:35] 2026-01-26 23:32:14,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:32:35] 2026-01-26 23:32:28,642 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:32:35] 2026-01-26 23:32:30,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441627166528)>', '<ExcThread(monitor, started 140440858781440)>']
[2026-01-27 00:32:35] 2026-01-26 23:32:31,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:32:35] 2026-01-26 23:32:31,160 | INFO     | [monitor] control thread has ended
[2026-01-27 00:32:35] 2026-01-26 23:32:35,227 | INFO     | all workflow threads have been joined
[2026-01-27 00:32:35] 2026-01-26 23:32:35,227 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:32:35] 2026-01-26 23:32:35,228 | INFO     | traces error code: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:35,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:32:35] 2026-01-26 23:32:35,333 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:32:35] 2026-01-26 23:32:35,335 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:32:35] 2026-01-26 23:32:35,336 [wrapper] pilotpid: 448781
[2026-01-27 00:32:35] 2026-01-26 23:32:35,338 [wrapper] Pilot exit status: 0
[2026-01-27 00:32:35] 2026-01-26 23:32:35,347 [wrapper] pandaids: 6982976600
[2026-01-27 00:32:35] 2026-01-26 23:32:35,382 [wrapper] cleanup supervisor_pilot  644794 448784
[2026-01-27 00:32:35] 2026-01-26 23:32:35,384 [wrapper] Test setup, not cleaning
[2026-01-27 00:32:35] 2026-01-26 23:32:35,387 [wrapper] apfmon messages muted
[2026-01-27 00:32:35] 2026-01-26 23:32:35,389 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:32:35] 2026-01-26 23:32:35,391 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:32:35]  *** Error codes and diagnostics ***
[2026-01-27 00:32:35]     "exeErrorCode": 0,
[2026-01-27 00:32:35]     "exeErrorDiag": "",
[2026-01-27 00:32:35]     "pilotErrorCode": 0,
[2026-01-27 00:32:35]     "pilotErrorDiag": "",
[2026-01-27 00:32:35]  *** Listing of results directory ***
[2026-01-27 00:32:35] total 450156
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc      5111 25 janv. 12:28 queuedata.json
[2026-01-27 00:32:35] -rwx------ 1 boinc boinc     36322 25 janv. 12:28 runpilot2-wrapper.sh
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc    584422 25 janv. 12:29 pilot3.tar.gz
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc       100 26 janv. 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:32:35] -rwxr-xr-x 1 boinc boinc      7986 26 janv. 15:03 run_atlas
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc       105 26 janv. 15:03 job.xml
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc 267967601 26 janv. 15:03 EVNT.48329051._000004.pool.root.1
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc     15845 26 janv. 15:03 start_atlas.sh
[2026-01-27 00:32:35] drwxrwx--x 2 boinc boinc      4096 26 janv. 15:03 shared
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc    597772 26 janv. 15:03 input.tar.gz
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc      6353 26 janv. 15:03 init_data.xml
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc         0 26 janv. 15:03 boinc_lockfile
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc      2618 26 janv. 15:04 pandaJob.out
[2026-01-27 00:32:35] -rw------- 1 boinc boinc        52 26 janv. 15:04 setup.sh.local
[2026-01-27 00:32:35] -rw------- 1 boinc boinc   1002197 26 janv. 15:04 agis_schedconf.cvmfs.json
[2026-01-27 00:32:35] -rw------- 1 boinc boinc       425 26 janv. 15:04 workernode_map.json
[2026-01-27 00:32:35] drwx------ 5 boinc boinc      4096 26 janv. 15:04 pilot3
[2026-01-27 00:32:35] -rw------- 1 boinc boinc 178163680 27 janv. 00:31 HITS.48329053._000082.pool.root.1
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc       530 27 janv. 00:31 boinc_task_state.xml
[2026-01-27 00:32:35] -rw------- 1 boinc boinc        95 27 janv. 00:31 pilot_heartbeat.json
[2026-01-27 00:32:35] -rw------- 1 boinc boinc      1036 27 janv. 00:31 memory_monitor_summary.json
[2026-01-27 00:32:35] -rw------- 1 boinc boinc   1516246 27 janv. 00:31 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:32:35] -rw------- 1 boinc boinc    642390 27 janv. 00:31 log.48329053._000082.job.log.tgz.1
[2026-01-27 00:32:35] -rw------- 1 boinc boinc      6309 27 janv. 00:32 heartbeat.json
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc      8192 27 janv. 00:32 boinc_mmap_file
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc        28 27 janv. 00:32 wrapper_checkpoint.txt
[2026-01-27 00:32:35] -rw------- 1 boinc boinc      4814 27 janv. 00:32 pilotlog.txt
[2026-01-27 00:32:35] -rw------- 1 boinc boinc   4802073 27 janv. 00:32 log.48329053._000082.job.log.1
[2026-01-27 00:32:35] -rw------- 1 boinc boinc       357 27 janv. 00:32 output.list
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc       620 27 janv. 00:32 runtime_log
[2026-01-27 00:32:35] -rw------- 1 boinc boinc   5457920 27 janv. 00:32 result.tar.gz
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc      9431 27 janv. 00:32 runtime_log.err
[2026-01-27 00:32:35] -rw------- 1 boinc boinc       648 27 janv. 00:32 C0eLDmYTD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8T7KDmi3CD9m.diag
[2026-01-27 00:32:35] -rw-r--r-- 1 boinc boinc     20799 27 janv. 00:32 stderr.txt
[2026-01-27 00:32:35] HITS file was successfully produced:
[2026-01-27 00:32:35] -rw------- 1 boinc boinc 178163680 27 janv. 00:31 shared/HITS.pool.root.1
[2026-01-27 00:32:35]  *** Contents of shared directory: ***
[2026-01-27 00:32:35] total 441620
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc 267967601 26 janv. 15:03 ATLAS.root_0
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc     15845 26 janv. 15:03 start_atlas.sh
[2026-01-27 00:32:35] -rw-r--r-- 2 boinc boinc    597772 26 janv. 15:03 input.tar.gz
[2026-01-27 00:32:35] -rw------- 1 boinc boinc 178163680 27 janv. 00:31 HITS.pool.root.1
[2026-01-27 00:32:35] -rw------- 1 boinc boinc   5457920 27 janv. 00:32 result.tar.gz
00:32:36 (440560): run_atlas exited; CPU time 68590.228444
00:32:36 (440560): called boinc_finish(0)

</stderr_txt>
]]>

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