Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:53:35 (588773): wrapper (7.7.26015): starting
09:53:35 (588773): wrapper: running run_atlas (--nthreads 12)
[2026-01-26 09:53:35] Arguments: --nthreads 12
[2026-01-26 09:53:35] Threads: 12
[2026-01-26 09:53:35] Checking for CVMFS
[2026-01-26 09:53:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 09:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 09:53:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 09:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 09:53:36] 2.13.3.0 562011 27 45296 155549 0 188 2421402 4096001 922 130560 0 78880 99.998 1408 938 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 09:53:36] CVMFS is ok
[2026-01-26 09:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 09:53:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 09:53:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 09:53:36] Further information can be found at the LHC@home message board.
[2026-01-26 09:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 09:53:36] Checking for apptainer binary...
[2026-01-26 09:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 09:53:36] Running /usr/bin/apptainer --version
[2026-01-26 09:53:36] apptainer version 1.4.5
[2026-01-26 09:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 09:53:36] zhiwei-Z790-Riptide-WiFi
[2026-01-26 09:53:36] apptainer works
[2026-01-26 09:53:36] Set ATHENA_PROC_NUMBER=12
[2026-01-26 09:53:36] Set ATHENA_CORE_NUMBER=12
[2026-01-26 09:53:36] Starting ATLAS job with PandaID=6982691080
[2026-01-26 09:53:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 10:20:12]  *** The last 200 lines of the pilot log: ***
[2026-01-26 10:20:12]  mtime=0
[2026-01-26 10:20:12]  protocol_id=None
[2026-01-26 10:20:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 10:20:12]  replicas=None
[2026-01-26 10:20:12]  scope=mc23_13p6TeV
[2026-01-26 10:20:12]  status=None
[2026-01-26 10:20:12]  status_code=0
[2026-01-26 10:20:12]  storage_token=
[2026-01-26 10:20:12]  surl=/var/lib/boinc/slots/9/PanDA_Pilot-6982691080/log.48310826._009941.job.log.tgz.1
[2026-01-26 10:20:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/fc/log.48310826._009941.job.log.tgz.1
[2026-01-26 10:20:12]  workdir=None
[2026-01-26 10:20:12] ]
[2026-01-26 10:20:12] 2026-01-26 15:19:35,411 | INFO     | transferring file log.48310826._009941.job.log.tgz.1 from /var/lib/boinc/slots/9/PanDA_Pilot-6982691080/log.48310826._009941.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-26 10:20:12] 2026-01-26 15:19:35,411 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-6982691080/log.48310826._009941.job.log.tgz.1 /var/lib/boinc/slots/9/log.48310826._009941.job
[2026-01-26 10:20:12] 2026-01-26 15:19:35,419 | INFO     | adding to output.list: log.48310826._009941.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/fc/log.48310826._009941.job.log.tg
[2026-01-26 10:20:12] 2026-01-26 15:19:35,420 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 10:20:12] 2026-01-26 15:19:35,420 | INFO     | summary of transferred files:
[2026-01-26 10:20:12] 2026-01-26 15:19:35,420 | INFO     |  -- lfn=log.48310826._009941.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 10:20:12] 2026-01-26 15:19:35,420 | INFO     | stage-out finished correctly
[2026-01-26 10:20:12] 2026-01-26 15:19:36,219 | INFO     | PID=592963 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 10:20:12] 2026-01-26 15:19:36,220 | INFO     | .. there are 2 such processes running
[2026-01-26 10:20:12] 2026-01-26 15:19:36,222 | WARNING  | process 597531 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 10:20:12] 2026-01-26 15:19:36,222 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6982691080/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:20:12] 2026-01-26 15:19:36,288 | INFO     | number of running child processes to parent process 597531: 1
[2026-01-26 10:20:12] 2026-01-26 15:19:36,288 | INFO     | maximum number of monitored processes: 6
[2026-01-26 10:20:12] 2026-01-26 15:19:37,220 | INFO     | time since job start (1550s) is within the limit (349056.0s)
[2026-01-26 10:20:12] 2026-01-26 15:19:38,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 10:20:12] 2026-01-26 15:19:38,790 | INFO     | monitor loop #122: job 0:6982691080 is in state 'finished'
[2026-01-26 10:20:12] 2026-01-26 15:19:38,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,225 | INFO     | time since job start (1552s) is within the limit (349056.0s)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,979 | INFO     | job 6982691080 has state=finished
[2026-01-26 10:20:12] 2026-01-26 15:19:39,979 | INFO     | preparing for final server update for job 6982691080 in state='finished'
[2026-01-26 10:20:12] 2026-01-26 15:19:39,979 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-6982691080/jobReport.json
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | this job has now completed (state=finished)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | log transfer has been attempted: DONE
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | job 6982691080 has finished - writing final server update
[2026-01-26 10:20:12] 2026-01-26 15:19:39,981 | INFO     | total number of processed events: 400 (read)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6982691080/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | INFO     | extracted standard info from prmon json
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 10:20:12] 2026-01-26 15:19:39,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | fitting pss+swap vs Time
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | sum of square deviations: 2120970.0
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | sum of deviations: -870303775.0
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | mean x: 1769440096.0
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | mean y: 2793703.736842105
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | intersect: 726062283081.3152
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | chi2: 0.017842805219291998
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | current memory leak: -410.33 B/s (using 19 data points, chi2=0.02)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | could have reported an average CPU frequency of 4124 MHz (4 samples)
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | ..............................
[2026-01-26 10:20:12] 2026-01-26 15:19:39,984 | INFO     | . Timing measurements:
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . get job = 0 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . initial setup = 4 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . payload setup = 1 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . stage-in = 0 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . payload execution = 1531 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . stage-out = 0 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | . log creation = 0 s
[2026-01-26 10:20:12] 2026-01-26 15:19:39,985 | INFO     | ..............................
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | 
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | job summary report
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | --------------------------------------------------
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | PanDA job id: 6982691080
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | task id: 48310826
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | errors: (none)
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | pilot state: finished 
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | transexitcode: 0
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | exeerrorcode: 0
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | exeerrordiag: 
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | exitcode: 0
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | exitmsg: OK
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | cpuconsumptiontime: 16010 s
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | nevents: 400
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | neventsw: 0
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | pid: 597531
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | pgrp: 597531
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | corecount: 12
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | event service: False
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | sizes: {0: 2284243, 10: 2284243, 1537: 2317984, 1540: 2317984, 1542: 2318178}
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | --------------------------------------------------
[2026-01-26 10:20:12] 2026-01-26 15:19:40,012 | INFO     | 
[2026-01-26 10:20:12] 2026-01-26 15:19:40,013 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | job 6982691080 has completed (purged errors)
[2026-01-26 10:20:12] 2026-01-26 15:19:40,023 | INFO     | overall cleanup function is called
[2026-01-26 10:20:12] 2026-01-26 15:19:41,029 | INFO     | --- collectZombieJob: --- 10, [597531]
[2026-01-26 10:20:12] 2026-01-26 15:19:41,029 | INFO     | zombie collector waiting for pid 597531
[2026-01-26 10:20:12] 2026-01-26 15:19:41,029 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 10:20:12] 2026-01-26 15:19:41,029 | INFO     | collected zombie processes
[2026-01-26 10:20:12] 2026-01-26 15:19:41,029 | INFO     | will attempt to kill all subprocesses of pid=597531
[2026-01-26 10:20:12] 2026-01-26 15:19:41,082 | INFO     | process IDs to be killed: [597531] (in reverse order)
[2026-01-26 10:20:12] 2026-01-26 15:19:41,104 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 10:20:12] 2026-01-26 15:19:41,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 10:20:12] 2026-01-26 15:19:41,107 | INFO     | did not find any defunct processes belonging to 597531
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | did not find any defunct processes belonging to 597531
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | ready for new job
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | **************************************
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | **************************************
[2026-01-26 10:20:12] 2026-01-26 15:19:41,109 | INFO     | 
[2026-01-26 10:20:12] 2026-01-26 15:19:41,110 | INFO     | architecture information:
[2026-01-26 10:20:12] 2026-01-26 15:19:41,110 | INFO     | executing command: cat /etc/os-release
[2026-01-26 10:20:12] 2026-01-26 15:19:41,116 | INFO     | cat /etc/os-release:
[2026-01-26 10:20:12] NAME="CentOS Linux"
[2026-01-26 10:20:12] VERSION="7 (Core)"
[2026-01-26 10:20:12] ID="centos"
[2026-01-26 10:20:12] ID_LIKE="rhel fedora"
[2026-01-26 10:20:12] VERSION_ID="7"
[2026-01-26 10:20:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 10:20:12] ANSI_COLOR="0;31"
[2026-01-26 10:20:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 10:20:12] HOME_URL="https://www.centos.org/"
[2026-01-26 10:20:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 10:20:12] 
[2026-01-26 10:20:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 10:20:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 10:20:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 10:20:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 10:20:12] 
[2026-01-26 10:20:12] 2026-01-26 15:19:41,116 | INFO     | **************************************
[2026-01-26 10:20:12] 2026-01-26 15:19:41,619 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | INFO     | sufficient remaining disk space (1818527531008 B)
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | INFO     | update_server=False
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 10:20:12] 2026-01-26 15:19:41,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:20:12] 2026-01-26 15:19:41,790 | INFO     | all job control threads have been joined
[2026-01-26 10:20:12] 2026-01-26 15:19:41,978 | INFO     | all data control threads have been joined
[2026-01-26 10:20:12] 2026-01-26 15:19:42,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 10:20:12] 2026-01-26 15:19:42,297 | INFO     | aborting loop
[2026-01-26 10:20:12] 2026-01-26 15:19:42,303 | INFO     | all payload control threads have been joined
[2026-01-26 10:20:12] 2026-01-26 15:19:42,632 | INFO     | [job] queue monitor thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:42,632 | INFO     | [job] retrieve thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:42,795 | INFO     | [job] control thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:42,983 | INFO     | [data] control thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,302 | INFO     | [job] job monitor thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,308 | INFO     | [payload] control thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,367 | INFO     | [payload] failed_post thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,425 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,567 | INFO     | [job] validate thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,632 | INFO     | [data] copytool_out thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,654 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,726 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,811 | INFO     | [data] copytool_in thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:43,954 | INFO     | [payload] validate_post thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:44,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 10:20:12] 2026-01-26 15:19:48,687 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:49,887 | INFO     | [monitor] cgroup control has ended
[2026-01-26 10:20:12] 2026-01-26 15:19:51,777 | INFO     | job.realtimelogging is not enabled
[2026-01-26 10:20:12] 2026-01-26 15:19:52,782 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 10:20:12] 2026-01-26 15:19:53,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123154000860992)>', '<ExcThread(monitor, started 123153648953088)>']
[2026-01-26 10:20:12] 2026-01-26 15:19:58,547 | INFO     | all workflow threads have been joined
[2026-01-26 10:20:12] 2026-01-26 15:19:58,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 10:20:12] 2026-01-26 15:19:58,547 | INFO     | traces error code: 0
[2026-01-26 10:20:12] 2026-01-26 15:19:58,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 10:20:12] 2026-01-26 15:20:12,383 | INFO     | PID=592963 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | INFO     | .. there are 2 such processes running
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 10:20:12] 2026-01-26 15:20:12,384 | INFO     | [monitor] control thread has ended
[2026-01-26 10:20:12] 2026-01-26 15:20:12,431 [wrapper] ==== pilot stdout END ====
[2026-01-26 10:20:12] 2026-01-26 15:20:12,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 10:20:12] 2026-01-26 15:20:12,433 [wrapper] pilotpid: 592963
[2026-01-26 10:20:12] 2026-01-26 15:20:12,434 [wrapper] Pilot exit status: 0
[2026-01-26 10:20:12] 2026-01-26 15:20:12,457 [wrapper] pandaids: 6982691080
[2026-01-26 10:20:12] 2026-01-26 15:20:12,511 [wrapper] cleanup supervisor_pilot  615677 592964
[2026-01-26 10:20:12] 2026-01-26 15:20:12,513 [wrapper] Test setup, not cleaning
[2026-01-26 10:20:12] 2026-01-26 15:20:12,515 [wrapper] apfmon messages muted
[2026-01-26 10:20:12] 2026-01-26 15:20:12,516 [wrapper] ==== wrapper stdout END ====
[2026-01-26 10:20:12] 2026-01-26 15:20:12,518 [wrapper] ==== wrapper stderr END ====
[2026-01-26 10:20:12]  *** Error codes and diagnostics ***
[2026-01-26 10:20:12]     "exeErrorCode": 0,
[2026-01-26 10:20:12]     "exeErrorDiag": "",
[2026-01-26 10:20:12]     "pilotErrorCode": 0,
[2026-01-26 10:20:12]     "pilotErrorDiag": "",
[2026-01-26 10:20:12]  *** Listing of results directory ***
[2026-01-26 10:20:12] total 656680
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc    584422 Jan 25 00:15 pilot3.tar.gz
[2026-01-26 10:20:12] -rwx------ 1 boinc boinc     36322 Jan 25 00:17 runpilot2-wrapper.sh
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc      5111 Jan 25 00:20 queuedata.json
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc       100 Jan 26 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 10:20:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 09:53 run_atlas
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc       105 Jan 26 09:53 job.xml
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc 489997100 Jan 26 09:53 EVNT.48310824._000117.pool.root.1
[2026-01-26 10:20:12] drwxrwx--x 2 boinc boinc      4096 Jan 26 09:53 shared
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc    597762 Jan 26 09:53 input.tar.gz
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc     15845 Jan 26 09:53 start_atlas.sh
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc         0 Jan 26 09:53 boinc_setup_complete
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc      8824 Jan 26 09:53 init_data.xml
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc         0 Jan 26 09:53 boinc_lockfile
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc      2524 Jan 26 09:53 pandaJob.out
[2026-01-26 10:20:12] -rw------- 1 boinc boinc   1002189 Jan 26 09:53 agis_schedconf.cvmfs.json
[2026-01-26 10:20:12] -rw------- 1 boinc boinc   1516246 Jan 26 09:53 agis_ddmendpoints.agis.ALL.json
[2026-01-26 10:20:12] -rw------- 1 boinc boinc       432 Jan 26 09:53 workernode_map.json
[2026-01-26 10:20:12] drwx------ 5 boinc boinc      4096 Jan 26 09:53 pilot3
[2026-01-26 10:20:12] -rw------- 1 boinc boinc 177253823 Jan 26 10:19 HITS.48310826._009941.pool.root.1
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc       530 Jan 26 10:19 boinc_task_state.xml
[2026-01-26 10:20:12] -rw------- 1 boinc boinc      1030 Jan 26 10:19 memory_monitor_summary.json
[2026-01-26 10:20:12] -rw------- 1 boinc boinc    359352 Jan 26 10:19 log.48310826._009941.job.log.tgz.1
[2026-01-26 10:20:12] -rw------- 1 boinc boinc      6330 Jan 26 10:19 heartbeat.json
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc        27 Jan 26 10:19 wrapper_checkpoint.txt
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc      8192 Jan 26 10:19 boinc_mmap_file
[2026-01-26 10:20:12] -rw------- 1 boinc boinc       821 Jan 26 10:20 pilotlog.txt
[2026-01-26 10:20:12] -rw------- 1 boinc boinc        95 Jan 26 10:20 pilot_heartbeat.json
[2026-01-26 10:20:12] -rw------- 1 boinc boinc    265834 Jan 26 10:20 log.48310826._009941.job.log.1
[2026-01-26 10:20:12] -rw------- 1 boinc boinc       357 Jan 26 10:20 output.list
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc       620 Jan 26 10:20 runtime_log
[2026-01-26 10:20:12] -rw------- 1 boinc boinc    645120 Jan 26 10:20 result.tar.gz
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc      8854 Jan 26 10:20 runtime_log.err
[2026-01-26 10:20:12] -rw------- 1 boinc boinc       659 Jan 26 10:20 b6cNDmAg738nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQv6KDmfYzbtn.diag
[2026-01-26 10:20:12] -rw-r--r-- 1 boinc boinc     21824 Jan 26 10:20 stderr.txt
[2026-01-26 10:20:12] HITS file was successfully produced:
[2026-01-26 10:20:12] -rw------- 1 boinc boinc 177253823 Jan 26 10:19 shared/HITS.pool.root.1
[2026-01-26 10:20:12]  *** Contents of shared directory: ***
[2026-01-26 10:20:12] total 652856
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc 489997100 Jan 26 09:53 ATLAS.root_0
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc    597762 Jan 26 09:53 input.tar.gz
[2026-01-26 10:20:12] -rw-r--r-- 2 boinc boinc     15845 Jan 26 09:53 start_atlas.sh
[2026-01-26 10:20:12] -rw------- 1 boinc boinc 177253823 Jan 26 10:19 HITS.pool.root.1
[2026-01-26 10:20:12] -rw------- 1 boinc boinc    645120 Jan 26 10:20 result.tar.gz
10:20:13 (588773): run_atlas exited; CPU time 16009.876392
10:20:13 (588773): called boinc_finish(0)

</stderr_txt>
]]>

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