Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:38:08 (4193145): wrapper (7.7.26015): starting
15:38:08 (4193145): wrapper: running run_atlas (--nthreads 4)
[2026-01-26 15:38:08] Arguments: --nthreads 4
[2026-01-26 15:38:08] Threads: 4
[2026-01-26 15:38:08] Checking for CVMFS
[2026-01-26 15:38:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 15:38:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 15:38:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 15:38:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 15:38:08] 2.13.1.0 4081218 460 54304 155549 0 50 7660325 10240001 911 130560 0 280208 99.985 20592 839 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-26 15:38:08] CVMFS is ok
[2026-01-26 15:38:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 15:38:08] Checking for apptainer binary...
[2026-01-26 15:38:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 15:38:08] Running /usr/bin/apptainer --version
[2026-01-26 15:38:08] apptainer version 1.4.5
[2026-01-26 15:38:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 15:38:09] atlas7l1
[2026-01-26 15:38:09] apptainer works
[2026-01-26 15:38:09] Set ATHENA_PROC_NUMBER=4
[2026-01-26 15:38:09] Set ATHENA_CORE_NUMBER=4
[2026-01-26 15:38:09] Starting ATLAS job with PandaID=6983466655
[2026-01-26 15:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 18:10:39]  *** The last 200 lines of the pilot log: ***
[2026-01-26 18:10:39] 2026-01-26 17:10:05,055 | INFO     | preparing for final server update for job 6983466655 in state='finished'
[2026-01-26 18:10:39] 2026-01-26 17:10:05,055 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983466655/jobReport.json
[2026-01-26 18:10:39] 2026-01-26 17:10:05,056 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-01-26 18:10:39] 2026-01-26 17:10:05,056 | INFO     | this job has now completed (state=finished)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,057 | INFO     | log transfer has been attempted: DONE
[2026-01-26 18:10:39] 2026-01-26 17:10:05,057 | INFO     | job 6983466655 has finished - writing final server update
[2026-01-26 18:10:39] 2026-01-26 17:10:05,057 | INFO     | total number of processed events: 400 (read)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6983466655/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | INFO     | extracted standard info from prmon json
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 18:10:39] 2026-01-26 17:10:05,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | fitting pss+swap vs Time
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | sum of square deviations: 1025693650.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | sum of deviations: -13416466026.000002
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | mean x: 1769442831.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | mean y: 2382920.1073825504
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | intersect: 23147373265.96822
[2026-01-26 18:10:39] 2026-01-26 17:10:05,060 | INFO     | chi2: 1.8520778485541265
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | sum of square deviations: 925859220.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | sum of deviations: -12671063655.000004
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | mean x: 1769442678.5
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | mean y: 2384059.2083333335
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | intersect: 24218507125.031673
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | chi2: 1.8490028743268183
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | current chi2=1.8490028743268183 (change=0.166028346470897 %)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | right removable region: 143
[2026-01-26 18:10:39] 2026-01-26 17:10:05,061 | INFO     | sum of square deviations: 925859220.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | sum of deviations: -33680001064.999992
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | mean x: 1769442983.5
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | mean y: 2413312.597222222
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | intersect: 64369479364.75228
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | chi2: 0.31195099132894766
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | current chi2=0.31195099132894766 (change=83.15670199433136 %)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | sum of square deviations: 832722590.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | sum of deviations: -27104231016.000004
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | mean x: 1769443136.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | mean y: 2402531.1223021583
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | intersect: 57595886968.50199
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | chi2: 0.29428482306088677
[2026-01-26 18:10:39] 2026-01-26 17:10:05,062 | INFO     | current chi2=0.29428482306088677 (change=5.66312297736287 %)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | left removable region: 20
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | sum of square deviations: 576985702.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | sum of deviations: -11886171775.000002
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | mean x: 1769443258.0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | mean y: 2377053.7560975607
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | intersect: 36453724873.64305
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | chi2: 0.1963962375591945
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | current memory leak: -20.60 B/s (using 123 data points, chi2=0.20)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | could have reported an average CPU frequency of 2400 MHz (9 samples)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | ..............................
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | . Timing measurements:
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | . get job = 0 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | . initial setup = 3 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,063 | INFO     | . payload setup = 3 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,064 | INFO     | . stage-in = 0 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,064 | INFO     | . payload execution = 9081 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,064 | INFO     | . stage-out = 0 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,064 | INFO     | . log creation = 0 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,064 | INFO     | ..............................
[2026-01-26 18:10:39] 2026-01-26 17:10:05,101 | INFO     | 
[2026-01-26 18:10:39] 2026-01-26 17:10:05,101 | INFO     | job summary report
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | --------------------------------------------------
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | PanDA job id: 6983466655
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | task id: 48329654
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | errors: (none)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | pilot state: finished 
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | transexitcode: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | exeerrorcode: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,102 | INFO     | exeerrordiag: 
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | exitcode: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | exitmsg: OK
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | cpuconsumptiontime: 35083 s
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | nevents: 400
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | neventsw: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | pid: 8209
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | pgrp: 8209
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | corecount: 4
[2026-01-26 18:10:39] 2026-01-26 17:10:05,103 | INFO     | event service: False
[2026-01-26 18:10:39] 2026-01-26 17:10:05,104 | INFO     | sizes: {0: 2284373, 11: 2284373, 9088: 2312794, 9089: 2312793, 9090: 2321875, 9092: 2321931, 9094: 2322317}
[2026-01-26 18:10:39] 2026-01-26 17:10:05,104 | INFO     | --------------------------------------------------
[2026-01-26 18:10:39] 2026-01-26 17:10:05,104 | INFO     | 
[2026-01-26 18:10:39] 2026-01-26 17:10:05,104 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 18:10:39] 2026-01-26 17:10:05,118 | INFO     | job 6983466655 has completed (purged errors)
[2026-01-26 18:10:39] 2026-01-26 17:10:05,118 | INFO     | overall cleanup function is called
[2026-01-26 18:10:39] 2026-01-26 17:10:05,407 | INFO     | PID=3286 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 18:10:39] 2026-01-26 17:10:05,407 | INFO     | .. there are 2 such processes running
[2026-01-26 18:10:39] 2026-01-26 17:10:06,124 | INFO     | --- collectZombieJob: --- 10, [8209]
[2026-01-26 18:10:39] 2026-01-26 17:10:06,125 | INFO     | zombie collector waiting for pid 8209
[2026-01-26 18:10:39] 2026-01-26 17:10:06,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 18:10:39] 2026-01-26 17:10:06,125 | INFO     | collected zombie processes
[2026-01-26 18:10:39] 2026-01-26 17:10:06,125 | INFO     | will attempt to kill all subprocesses of pid=8209
[2026-01-26 18:10:39] 2026-01-26 17:10:06,211 | INFO     | process IDs to be killed: [8209] (in reverse order)
[2026-01-26 18:10:39] 2026-01-26 17:10:06,247 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 18:10:39] 2026-01-26 17:10:06,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 18:10:39] 2026-01-26 17:10:06,252 | INFO     | did not find any defunct processes belonging to 8209
[2026-01-26 18:10:39] 2026-01-26 17:10:06,254 | INFO     | did not find any defunct processes belonging to 8209
[2026-01-26 18:10:39] 2026-01-26 17:10:06,254 | INFO     | ready for new job
[2026-01-26 18:10:39] 2026-01-26 17:10:06,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 18:10:39] 2026-01-26 17:10:06,255 | INFO     | **************************************
[2026-01-26 18:10:39] 2026-01-26 17:10:06,255 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 18:10:39] 2026-01-26 17:10:06,255 | INFO     | **************************************
[2026-01-26 18:10:39] 2026-01-26 17:10:06,255 | INFO     | 
[2026-01-26 18:10:39] 2026-01-26 17:10:06,256 | INFO     | pilot is running in a VM
[2026-01-26 18:10:39] 2026-01-26 17:10:06,256 | INFO     | architecture information:
[2026-01-26 18:10:39] 2026-01-26 17:10:06,256 | INFO     | executing command: cat /etc/os-release
[2026-01-26 18:10:39] 2026-01-26 17:10:06,269 | INFO     | cat /etc/os-release:
[2026-01-26 18:10:39] NAME="CentOS Linux"
[2026-01-26 18:10:39] VERSION="7 (Core)"
[2026-01-26 18:10:39] ID="centos"
[2026-01-26 18:10:39] ID_LIKE="rhel fedora"
[2026-01-26 18:10:39] VERSION_ID="7"
[2026-01-26 18:10:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 18:10:39] ANSI_COLOR="0;31"
[2026-01-26 18:10:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 18:10:39] HOME_URL="https://www.centos.org/"
[2026-01-26 18:10:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 18:10:39] 
[2026-01-26 18:10:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 18:10:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 18:10:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 18:10:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 18:10:39] 
[2026-01-26 18:10:39] 2026-01-26 17:10:06,269 | INFO     | **************************************
[2026-01-26 18:10:39] 2026-01-26 17:10:06,772 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | INFO     | sufficient remaining disk space (150793617408 B)
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | INFO     | update_server=False
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 18:10:39] 2026-01-26 17:10:06,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:10:39] 2026-01-26 17:10:06,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 18:10:39] 2026-01-26 17:10:06,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 18:10:39] 2026-01-26 17:10:06,862 | INFO     | aborting loop
[2026-01-26 18:10:39] 2026-01-26 17:10:06,912 | INFO     | all payload control threads have been joined
[2026-01-26 18:10:39] 2026-01-26 17:10:07,508 | INFO     | all data control threads have been joined
[2026-01-26 18:10:39] 2026-01-26 17:10:07,792 | INFO     | [job] retrieve thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:07,792 | INFO     | [job] queue monitor thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:07,865 | INFO     | [job] job monitor thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:07,912 | INFO     | [payload] control thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,348 | INFO     | all job control threads have been joined
[2026-01-26 18:10:39] 2026-01-26 17:10:08,443 | INFO     | [payload] failed_post thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,509 | INFO     | [data] control thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,548 | INFO     | [payload] validate_post thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 18:10:39] 2026-01-26 17:10:08,742 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,743 | INFO     | [job] validate thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,743 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:08,797 | INFO     | [data] copytool_out thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:09,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:09,116 | INFO     | [data] copytool_in thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:09,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:09,350 | INFO     | [job] control thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:12,640 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 18:10:39] 2026-01-26 17:10:32,974 | INFO     | [monitor] cgroup control has ended
[2026-01-26 18:10:39] 2026-01-26 17:10:34,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134995118139200)>', '<ExcThread(monitor, started 134994613745408)>']
[2026-01-26 18:10:39] 2026-01-26 17:10:37,603 | INFO     | PID=3286 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | INFO     | .. there are 2 such processes running
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 18:10:39] 2026-01-26 17:10:37,604 | INFO     | [monitor] control thread has ended
[2026-01-26 18:10:39] 2026-01-26 17:10:39,378 | INFO     | all workflow threads have been joined
[2026-01-26 18:10:39] 2026-01-26 17:10:39,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 18:10:39] 2026-01-26 17:10:39,378 | INFO     | traces error code: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:39,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 18:10:39] 2026-01-26 17:10:39,451 [wrapper] ==== pilot stdout END ====
[2026-01-26 18:10:39] 2026-01-26 17:10:39,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 18:10:39] 2026-01-26 17:10:39,458 [wrapper] pilotpid: 3286
[2026-01-26 18:10:39] 2026-01-26 17:10:39,460 [wrapper] Pilot exit status: 0
[2026-01-26 18:10:39] 2026-01-26 17:10:39,472 [wrapper] pandaids: 6983466655
[2026-01-26 18:10:39] 2026-01-26 17:10:39,499 [wrapper] cleanup supervisor_pilot   33066 3287
[2026-01-26 18:10:39] 2026-01-26 17:10:39,504 [wrapper] Test setup, not cleaning
[2026-01-26 18:10:39] 2026-01-26 17:10:39,507 [wrapper] apfmon messages muted
[2026-01-26 18:10:39] 2026-01-26 17:10:39,512 [wrapper] ==== wrapper stdout END ====
[2026-01-26 18:10:39] 2026-01-26 17:10:39,516 [wrapper] ==== wrapper stderr END ====
[2026-01-26 18:10:39]  *** Error codes and diagnostics ***
[2026-01-26 18:10:39]     "exeErrorCode": 0,
[2026-01-26 18:10:39]     "exeErrorDiag": "",
[2026-01-26 18:10:39]     "pilotErrorCode": 0,
[2026-01-26 18:10:39]     "pilotErrorDiag": "",
[2026-01-26 18:10:39]  *** Listing of results directory ***
[2026-01-26 18:10:39] insgesamt 467464
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-01-26 18:10:39] -rwx------ 1 yeti boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc      5111 Jan 25 23:56 queuedata.json
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc       100 Jan 26 15:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 18:10:39] -rwxr-xr-x 1 yeti boinc      7986 Jan 26 15:38 run_atlas
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc       105 Jan 26 15:38 job.xml
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc     15845 Jan 26 15:38 start_atlas.sh
[2026-01-26 18:10:39] drwxrwx--x 2 yeti boinc      4096 Jan 26 15:38 shared
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc    597773 Jan 26 15:38 input.tar.gz
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc 271534624 Jan 26 15:38 EVNT.48329652._000002.pool.root.1
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc         0 Jan 26 15:38 boinc_setup_complete
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc         0 Jan 26 15:38 boinc_lockfile
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc      2611 Jan 26 15:38 pandaJob.out
[2026-01-26 18:10:39] -rw------- 1 yeti boinc        52 Jan 26 15:38 setup.sh.local
[2026-01-26 18:10:39] -rw------- 1 yeti boinc   1002189 Jan 26 15:38 agis_schedconf.cvmfs.json
[2026-01-26 18:10:39] -rw------- 1 yeti boinc   1516246 Jan 26 15:38 agis_ddmendpoints.agis.ALL.json
[2026-01-26 18:10:39] -rw------- 1 yeti boinc       419 Jan 26 15:38 workernode_map.json
[2026-01-26 18:10:39] drwx------ 5 yeti boinc      4096 Jan 26 15:38 pilot3
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc      6623 Jan 26 16:40 init_data.xml
[2026-01-26 18:10:39] -rw------- 1 yeti boinc 199881543 Jan 26 18:09 HITS.48329654._000040.pool.root.1
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc       529 Jan 26 18:09 boinc_task_state.xml
[2026-01-26 18:10:39] -rw------- 1 yeti boinc      1030 Jan 26 18:09 memory_monitor_summary.json
[2026-01-26 18:10:39] -rw------- 1 yeti boinc    333096 Jan 26 18:10 log.48329654._000040.job.log.tgz.1
[2026-01-26 18:10:39] -rw------- 1 yeti boinc      6308 Jan 26 18:10 heartbeat.json
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc      8192 Jan 26 18:10 boinc_mmap_file
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc        27 Jan 26 18:10 wrapper_checkpoint.txt
[2026-01-26 18:10:39] -rw------- 1 yeti boinc        95 Jan 26 18:10 pilot_heartbeat.json
[2026-01-26 18:10:39] -rw------- 1 yeti boinc      4893 Jan 26 18:10 pilotlog.txt
[2026-01-26 18:10:39] -rw------- 1 yeti boinc   1331565 Jan 26 18:10 log.48329654._000040.job.log.1
[2026-01-26 18:10:39] -rw------- 1 yeti boinc       357 Jan 26 18:10 output.list
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc       620 Jan 26 18:10 runtime_log
[2026-01-26 18:10:39] -rw------- 1 yeti boinc   1679360 Jan 26 18:10 result.tar.gz
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc      9544 Jan 26 18:10 runtime_log.err
[2026-01-26 18:10:39] -rw------- 1 yeti boinc       640 Jan 26 18:10 B6vKDmeBO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtZ8KDmnxnQAn.diag
[2026-01-26 18:10:39] -rw-r--r-- 1 yeti boinc     21069 Jan 26 18:10 stderr.txt
[2026-01-26 18:10:39] HITS file was successfully produced:
[2026-01-26 18:10:39] -rw------- 1 yeti boinc 199881543 Jan 26 18:09 shared/HITS.pool.root.1
[2026-01-26 18:10:39]  *** Contents of shared directory: ***
[2026-01-26 18:10:39] insgesamt 462616
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc     15845 Jan 26 15:38 start_atlas.sh
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc    597773 Jan 26 15:38 input.tar.gz
[2026-01-26 18:10:39] -rw-r--r-- 2 yeti boinc 271534624 Jan 26 15:38 ATLAS.root_0
[2026-01-26 18:10:39] -rw------- 1 yeti boinc 199881543 Jan 26 18:09 HITS.pool.root.1
[2026-01-26 18:10:39] -rw------- 1 yeti boinc   1679360 Jan 26 18:10 result.tar.gz
18:10:40 (4193145): run_atlas exited; CPU time 35199.438131
18:10:40 (4193145): called boinc_finish(0)

</stderr_txt>
]]>

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