Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:29 (24661): wrapper (7.7.26015): starting
08:21:29 (24661): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 08:21:29] Arguments: --nthreads 8
[2026-01-26 08:21:29] Threads: 8
[2026-01-26 08:21:29] Checking for CVMFS
[2026-01-26 08:21:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:21:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:21:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:21:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:21:30] 2.11.2.0 4329 54236 215000 155548 2 50 10082406 18432000 1833 130560 0 24656113 99.920 3006452 20886 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 08:21:30] CVMFS is ok
[2026-01-26 08:21:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:21:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:21:30] Further information can be found at the LHC@home message board.
[2026-01-26 08:21:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:21:30] Checking for apptainer binary...
[2026-01-26 08:21:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:21:30] Running /usr/bin/apptainer --version
[2026-01-26 08:21:30] apptainer version 1.3.2-1.el7
[2026-01-26 08:21:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:21:31] c-206-17.aglt2.org
[2026-01-26 08:21:31] apptainer works
[2026-01-26 08:21:31] Set ATHENA_PROC_NUMBER=8
[2026-01-26 08:21:31] Set ATHENA_CORE_NUMBER=8
[2026-01-26 08:21:31] Starting ATLAS job with PandaID=6983771350
[2026-01-26 08:21:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 12:07:14]  *** The last 200 lines of the pilot log: ***
[2026-01-26 12:07:14] 2026-01-26 17:06:21,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 12:07:14] 2026-01-26 17:06:21,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 12:07:14] 2026-01-26 17:06:21,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 12:07:14] 2026-01-26 17:06:21,836 | INFO     | fitting pss+swap vs Time
[2026-01-26 12:07:14] 2026-01-26 17:06:21,837 | INFO     | sum of square deviations: 3346927870.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,839 | INFO     | sum of deviations: -21967156946.999996
[2026-01-26 12:07:14] 2026-01-26 17:06:21,839 | INFO     | mean x: 1769440428.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,839 | INFO     | mean y: 2541870.7239819006
[2026-01-26 12:07:14] 2026-01-26 17:06:21,839 | INFO     | intersect: 11616050467.263544
[2026-01-26 12:07:14] 2026-01-26 17:06:21,840 | INFO     | chi2: 1.6654685875033157
[2026-01-26 12:07:14] 2026-01-26 17:06:21,840 | INFO     | sum of square deviations: 3124858590.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,842 | INFO     | sum of deviations: -21310641915.5
[2026-01-26 12:07:14] 2026-01-26 17:06:21,842 | INFO     | mean x: 1769440275.5
[2026-01-26 12:07:14] 2026-01-26 17:06:21,842 | INFO     | mean y: 2542321.6435185187
[2026-01-26 12:07:14] 2026-01-26 17:06:21,843 | INFO     | intersect: 12069618963.99621
[2026-01-26 12:07:14] 2026-01-26 17:06:21,843 | INFO     | chi2: 1.6636624389242116
[2026-01-26 12:07:14] 2026-01-26 17:06:21,843 | INFO     | current chi2=1.6636624389242116 (change=0.10844687150849729 %)
[2026-01-26 12:07:14] 2026-01-26 17:06:21,843 | INFO     | right removable region: 215
[2026-01-26 12:07:14] 2026-01-26 17:06:21,844 | INFO     | sum of square deviations: 3124858590.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,846 | INFO     | sum of deviations: -54838393141.5
[2026-01-26 12:07:14] 2026-01-26 17:06:21,846 | INFO     | mean x: 1769440580.5
[2026-01-26 12:07:14] 2026-01-26 17:06:21,846 | INFO     | mean y: 2564209.032407407
[2026-01-26 12:07:14] 2026-01-26 17:06:21,846 | INFO     | intersect: 31054618373.82038
[2026-01-26 12:07:14] 2026-01-26 17:06:21,847 | INFO     | chi2: 0.2545010571614935
[2026-01-26 12:07:14] 2026-01-26 17:06:21,847 | INFO     | current chi2=0.2545010571614935 (change=84.7189518270643 %)
[2026-01-26 12:07:14] 2026-01-26 17:06:21,848 | INFO     | sum of square deviations: 2912836010.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,849 | INFO     | sum of deviations: -57564069714.00001
[2026-01-26 12:07:14] 2026-01-26 17:06:21,850 | INFO     | mean x: 1769440733.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,850 | INFO     | mean y: 2566144.9004739337
[2026-01-26 12:07:14] 2026-01-26 17:06:21,850 | INFO     | intersect: 34970621112.472534
[2026-01-26 12:07:14] 2026-01-26 17:06:21,850 | INFO     | chi2: 0.21638396863076384
[2026-01-26 12:07:14] 2026-01-26 17:06:21,851 | INFO     | current chi2=0.21638396863076384 (change=14.97718278888818 %)
[2026-01-26 12:07:14] 2026-01-26 17:06:21,851 | INFO     | left removable region: 20
[2026-01-26 12:07:14] 2026-01-26 17:06:21,851 | INFO     | sum of square deviations: 2299168690.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,853 | INFO     | sum of deviations: -44279121578.99999
[2026-01-26 12:07:14] 2026-01-26 17:06:21,853 | INFO     | mean x: 1769440855.0
[2026-01-26 12:07:14] 2026-01-26 17:06:21,853 | INFO     | mean y: 2557895.7230769233
[2026-01-26 12:07:14] 2026-01-26 17:06:21,854 | INFO     | intersect: 34079782018.584064
[2026-01-26 12:07:14] 2026-01-26 17:06:21,854 | INFO     | chi2: 0.20328694027209504
[2026-01-26 12:07:14] 2026-01-26 17:06:21,854 | INFO     | current memory leak: -19.26 B/s (using 195 data points, chi2=0.20)
[2026-01-26 12:07:14] 2026-01-26 17:06:21,855 | INFO     | could have reported an average CPU frequency of 2444 MHz (11 samples)
[2026-01-26 12:07:14] 2026-01-26 17:06:21,855 | INFO     | ..............................
[2026-01-26 12:07:14] 2026-01-26 17:06:21,855 | INFO     | . Timing measurements:
[2026-01-26 12:07:14] 2026-01-26 17:06:21,855 | INFO     | . get job = 0 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . initial setup = 6 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . payload setup = 6 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . stage-in = 0 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . payload execution = 13460 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . stage-out = 2 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,856 | INFO     | . log creation = 0 s
[2026-01-26 12:07:14] 2026-01-26 17:06:21,857 | INFO     | ..............................
[2026-01-26 12:07:14] 2026-01-26 17:06:22,010 | INFO     | 
[2026-01-26 12:07:14] 2026-01-26 17:06:22,010 | INFO     | job summary report
[2026-01-26 12:07:14] 2026-01-26 17:06:22,010 | INFO     | --------------------------------------------------
[2026-01-26 12:07:14] 2026-01-26 17:06:22,010 | INFO     | PanDA job id: 6983771350
[2026-01-26 12:07:14] 2026-01-26 17:06:22,010 | INFO     | task id: 48298567
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | errors: (none)
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | pilot state: finished 
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | transexitcode: 0
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | exeerrorcode: 0
[2026-01-26 12:07:14] 2026-01-26 17:06:22,011 | INFO     | exeerrordiag: 
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | exitcode: 0
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | exitmsg: OK
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | cpuconsumptiontime: 101605 s
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | nevents: 400
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | neventsw: 0
[2026-01-26 12:07:14] 2026-01-26 17:06:22,012 | INFO     | pid: 606
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | pgrp: 606
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | corecount: 8
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | event service: False
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | sizes: {0: 2283932, 1: 2284393, 2: 2284393, 13470: 2314700, 13473: 2323754, 13474: 2323892}
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | --------------------------------------------------
[2026-01-26 12:07:14] 2026-01-26 17:06:22,013 | INFO     | 
[2026-01-26 12:07:14] 2026-01-26 17:06:22,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 12:07:14] 2026-01-26 17:06:22,036 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 12:07:14] 2026-01-26 17:06:22,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,040 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 12:07:14] 2026-01-26 17:06:22,040 | INFO     | job 6983771350 has completed (purged errors)
[2026-01-26 12:07:14] 2026-01-26 17:06:22,040 | INFO     | overall cleanup function is called
[2026-01-26 12:07:14] 2026-01-26 17:06:23,048 | INFO     | --- collectZombieJob: --- 10, [606]
[2026-01-26 12:07:14] 2026-01-26 17:06:23,048 | INFO     | zombie collector waiting for pid 606
[2026-01-26 12:07:14] 2026-01-26 17:06:23,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 12:07:14] 2026-01-26 17:06:23,048 | INFO     | collected zombie processes
[2026-01-26 12:07:14] 2026-01-26 17:06:23,048 | INFO     | will attempt to kill all subprocesses of pid=606
[2026-01-26 12:07:14] 2026-01-26 17:06:23,164 | INFO     | process IDs to be killed: [606] (in reverse order)
[2026-01-26 12:07:14] 2026-01-26 17:06:23,211 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 12:07:14] 2026-01-26 17:06:23,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 12:07:14] 2026-01-26 17:06:23,217 | INFO     | did not find any defunct processes belonging to 606
[2026-01-26 12:07:14] 2026-01-26 17:06:23,222 | INFO     | did not find any defunct processes belonging to 606
[2026-01-26 12:07:14] 2026-01-26 17:06:23,223 | INFO     | ready for new job
[2026-01-26 12:07:14] 2026-01-26 17:06:23,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 12:07:14] 2026-01-26 17:06:23,225 | INFO     | **************************************
[2026-01-26 12:07:14] 2026-01-26 17:06:23,225 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 12:07:14] 2026-01-26 17:06:23,225 | INFO     | **************************************
[2026-01-26 12:07:14] 2026-01-26 17:06:23,225 | INFO     | 
[2026-01-26 12:07:14] 2026-01-26 17:06:23,227 | INFO     | architecture information:
[2026-01-26 12:07:14] 2026-01-26 17:06:23,227 | INFO     | executing command: cat /etc/os-release
[2026-01-26 12:07:14] 2026-01-26 17:06:23,240 | INFO     | cat /etc/os-release:
[2026-01-26 12:07:14] NAME="CentOS Linux"
[2026-01-26 12:07:14] VERSION="7 (Core)"
[2026-01-26 12:07:14] ID="centos"
[2026-01-26 12:07:14] ID_LIKE="rhel fedora"
[2026-01-26 12:07:14] VERSION_ID="7"
[2026-01-26 12:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 12:07:14] ANSI_COLOR="0;31"
[2026-01-26 12:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 12:07:14] HOME_URL="https://www.centos.org/"
[2026-01-26 12:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 12:07:14] 
[2026-01-26 12:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 12:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 12:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 12:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 12:07:14] 
[2026-01-26 12:07:14] 2026-01-26 17:06:23,240 | INFO     | **************************************
[2026-01-26 12:07:14] 2026-01-26 17:06:23,743 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 12:07:14] 2026-01-26 17:06:23,764 | INFO     | sufficient remaining disk space (27864858624 B)
[2026-01-26 12:07:14] 2026-01-26 17:06:23,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 12:07:14] 2026-01-26 17:06:23,765 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 12:07:14] 2026-01-26 17:06:23,765 | INFO     | update_server=False
[2026-01-26 12:07:14] 2026-01-26 17:06:23,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 12:07:14] 2026-01-26 17:06:23,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:07:14] 2026-01-26 17:06:23,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 12:07:14] 2026-01-26 17:06:24,104 | INFO     | all job control threads have been joined
[2026-01-26 12:07:14] 2026-01-26 17:06:24,104 | INFO     | all payload control threads have been joined
[2026-01-26 12:07:14] 2026-01-26 17:06:24,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 12:07:14] 2026-01-26 17:06:24,691 | WARNING  | process 606 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 12:07:14] 2026-01-26 17:06:24,779 | INFO     | [job] retrieve thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:24,786 | INFO     | [job] queue monitor thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:24,792 | INFO     | all data control threads have been joined
[2026-01-26 12:07:14] 2026-01-26 17:06:24,831 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:07:14] 2026-01-26 17:06:24,832 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 12:07:14] 2026-01-26 17:06:24,833 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 12:07:14] 2026-01-26 17:06:24,833 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 12:07:14] 2026-01-26 17:06:24,834 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-6983771350/payload.stdout) since it has not been created yet
[2026-01-26 12:07:14] 2026-01-26 17:06:24,834 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 12:07:14] 2026-01-26 17:06:24,856 | INFO     | sufficient remaining disk space (27864858624 B)
[2026-01-26 12:07:14] 2026-01-26 17:06:24,856 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 12:07:14] 2026-01-26 17:06:24,857 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6983771350/HITS.48298567._000547.pool.root.1 since it does not exist
[2026-01-26 12:07:14] 2026-01-26 17:06:25,010 | INFO     | number of running child processes to parent process 606: 1
[2026-01-26 12:07:14] 2026-01-26 17:06:25,010 | INFO     | maximum number of monitored processes: 6
[2026-01-26 12:07:14] 2026-01-26 17:06:25,011 | INFO     | aborting job monitoring since job object (job id=6983771350) has expired
[2026-01-26 12:07:14] 2026-01-26 17:06:25,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 12:07:14] 2026-01-26 17:06:25,011 | INFO     | will abort loop
[2026-01-26 12:07:14] 2026-01-26 17:06:25,022 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,076 | INFO     | [job] validate thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,110 | INFO     | [job] control thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,110 | INFO     | [payload] control thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,181 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,333 | INFO     | [data] copytool_in thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,344 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,746 | INFO     | [payload] validate_post thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:25,797 | INFO     | [data] control thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:26,016 | INFO     | [job] job monitor thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:26,171 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:26,246 | INFO     | [payload] failed_post thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:26,286 | INFO     | [data] copytool_out thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:27,772 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 12:07:14] 2026-01-26 17:06:40,954 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-01-26 12:07:14] 2026-01-26 17:06:53,676 | INFO     | PID=28675 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 12:07:14] 2026-01-26 17:06:53,676 | INFO     | .. there are 3 such processes running
[2026-01-26 12:07:14] 2026-01-26 17:06:53,676 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 12:07:14] 2026-01-26 17:06:53,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 12:07:14] 2026-01-26 17:06:53,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 12:07:14] 2026-01-26 17:07:07,761 | INFO     | [monitor] cgroup control has ended
[2026-01-26 12:07:14] 2026-01-26 17:07:09,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072566495040)>', '<ExcThread(monitor, started 140072129111808)>']
[2026-01-26 12:07:14] 2026-01-26 17:07:09,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 12:07:14] 2026-01-26 17:07:09,766 | INFO     | [monitor] control thread has ended
[2026-01-26 12:07:14] 2026-01-26 17:07:14,076 | INFO     | all workflow threads have been joined
[2026-01-26 12:07:14] 2026-01-26 17:07:14,076 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 12:07:14] 2026-01-26 17:07:14,076 | INFO     | traces error code: 0
[2026-01-26 12:07:14] 2026-01-26 17:07:14,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 12:07:14] 2026-01-26 17:07:14,197 [wrapper] ==== pilot stdout END ====
[2026-01-26 12:07:14] 2026-01-26 17:07:14,200 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 12:07:14] 2026-01-26 17:07:14,202 [wrapper] pilotpid: 28675
[2026-01-26 12:07:14] 2026-01-26 17:07:14,205 [wrapper] Pilot exit status: 0
[2026-01-26 12:07:14] 2026-01-26 17:07:14,214 [wrapper] pandaids: 6983771350
[2026-01-26 12:07:14] 2026-01-26 17:07:14,252 [wrapper] cleanup supervisor_pilot 29997 28676
[2026-01-26 12:07:14] 2026-01-26 17:07:14,255 [wrapper] Test setup, not cleaning
[2026-01-26 12:07:14] 2026-01-26 17:07:14,258 [wrapper] apfmon messages muted
[2026-01-26 12:07:14] 2026-01-26 17:07:14,260 [wrapper] ==== wrapper stdout END ====
[2026-01-26 12:07:14] 2026-01-26 17:07:14,262 [wrapper] ==== wrapper stderr END ====
[2026-01-26 12:07:14]  *** Error codes and diagnostics ***
[2026-01-26 12:07:14]     "exeErrorCode": 0,
[2026-01-26 12:07:14]     "exeErrorDiag": "",
[2026-01-26 12:07:14]     "pilotErrorCode": 0,
[2026-01-26 12:07:14]     "pilotErrorDiag": "",
[2026-01-26 12:07:14]  *** Listing of results directory ***
[2026-01-26 12:07:14] total 420924
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 20:12 pilot3.tar.gz
[2026-01-26 12:07:14] -rwx------ 1 boincer umatlas     36322 Jan 25 20:15 runpilot2-wrapper.sh
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 20:18 queuedata.json
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas       100 Jan 26 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 12:07:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 08:21 run_atlas
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas       105 Jan 26 08:21 job.xml
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas 251528517 Jan 26 08:21 EVNT.48298565._000022.pool.root.1
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 08:21 start_atlas.sh
[2026-01-26 12:07:14] drwxrwx--x 2 boincer umatlas      4096 Jan 26 08:21 shared
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas    597779 Jan 26 08:21 input.tar.gz
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas         0 Jan 26 08:21 boinc_lockfile
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas      2614 Jan 26 08:21 pandaJob.out
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas        57 Jan 26 08:21 setup.sh.local
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas   1002197 Jan 26 08:21 agis_schedconf.cvmfs.json
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas       435 Jan 26 08:21 workernode_map.json
[2026-01-26 12:07:14] drwx------ 5 boincer umatlas      4096 Jan 26 08:21 pilot3
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas      5952 Jan 26 12:04 init_data.xml
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas 170850466 Jan 26 12:05 HITS.48298567._000547.pool.root.1
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas       531 Jan 26 12:05 boinc_task_state.xml
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas      1054 Jan 26 12:06 memory_monitor_summary.json
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas   1516246 Jan 26 12:06 agis_ddmendpoints.agis.ALL.json
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas    466420 Jan 26 12:06 log.48298567._000547.job.log.tgz.1
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas        95 Jan 26 12:06 pilot_heartbeat.json
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas      6415 Jan 26 12:06 heartbeat.json
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas        29 Jan 26 12:06 wrapper_checkpoint.txt
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 12:06 boinc_mmap_file
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas      6294 Jan 26 12:07 pilotlog.txt
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas   1887340 Jan 26 12:07 log.48298567._000547.job.log.1
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas       357 Jan 26 12:07 output.list
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas       620 Jan 26 12:07 runtime_log
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas   2375680 Jan 26 12:07 result.tar.gz
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas       663 Jan 26 12:07 vDyLDmDNQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMn8KDmg3YXbm.diag
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas      9342 Jan 26 12:07 runtime_log.err
[2026-01-26 12:07:14] -rw-r--r-- 1 boincer umatlas     21401 Jan 26 12:07 stderr.txt
[2026-01-26 12:07:14] HITS file was successfully produced:
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas 170850466 Jan 26 12:05 shared/HITS.pool.root.1
[2026-01-26 12:07:14]  *** Contents of shared directory: ***
[2026-01-26 12:07:14] total 415408
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas 251528517 Jan 26 08:21 ATLAS.root_0
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 08:21 start_atlas.sh
[2026-01-26 12:07:14] -rw-r--r-- 2 boincer umatlas    597779 Jan 26 08:21 input.tar.gz
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas 170850466 Jan 26 12:05 HITS.pool.root.1
[2026-01-26 12:07:14] -rw------- 1 boincer umatlas   2375680 Jan 26 12:07 result.tar.gz
12:07:16 (24661): run_atlas exited; CPU time 101789.210094
12:07:16 (24661): called boinc_finish(0)

</stderr_txt>
]]>

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