Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:45 (2486749): wrapper (7.7.26015): starting
08:14:45 (2486749): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 08:14:45] Arguments: --nthreads 8
[2026-01-26 08:14:45] Threads: 8
[2026-01-26 08:14:45] Checking for CVMFS
[2026-01-26 08:14:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 08:14:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 08:14:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 08:14:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 08:14:47] 2.13.3.0 11035 20406 389936 155547 2 488 17728630 32935936 56464 16776704 0 200998882 99.812 96392730 28140 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 08:14:47] CVMFS is ok
[2026-01-26 08:14:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 08:14:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 08:14:47] Further information can be found at the LHC@home message board.
[2026-01-26 08:14:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 08:14:47] Checking for apptainer binary...
[2026-01-26 08:14:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 08:14:47] Running /usr/bin/apptainer --version
[2026-01-26 08:14:47] apptainer version 1.4.5-2.el9
[2026-01-26 08:14:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 08:14:48] lc-10-9.aglt2.org
[2026-01-26 08:14:48] apptainer works
[2026-01-26 08:14:48] Set ATHENA_PROC_NUMBER=8
[2026-01-26 08:14:48] Set ATHENA_CORE_NUMBER=8
[2026-01-26 08:14:48] Starting ATLAS job with PandaID=6983304166
[2026-01-26 08:14:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 13:00:06]  *** The last 200 lines of the pilot log: ***
[2026-01-26 13:00:06] 2026-01-26 17:59:08,338 | INFO     | job 6983304166 has finished - writing final server update
[2026-01-26 13:00:06] 2026-01-26 17:59:08,338 | INFO     | total number of processed events: 400 (read)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,428 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6983304166/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,429 | INFO     | extracted standard info from prmon json
[2026-01-26 13:00:06] 2026-01-26 17:59:08,429 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 13:00:06] 2026-01-26 17:59:08,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 13:00:06] 2026-01-26 17:59:08,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 13:00:06] 2026-01-26 17:59:08,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 13:00:06] 2026-01-26 17:59:08,434 | INFO     | fitting pss+swap vs Time
[2026-01-26 13:00:06] 2026-01-26 17:59:08,434 | INFO     | sum of square deviations: 6590221940.758146
[2026-01-26 13:00:06] 2026-01-26 17:59:08,445 | INFO     | sum of deviations: -37809483459.59925
[2026-01-26 13:00:06] 2026-01-26 17:59:08,446 | INFO     | mean x: 1769441905.3249097
[2026-01-26 13:00:06] 2026-01-26 17:59:08,446 | INFO     | mean y: 2514772.0288808662
[2026-01-26 13:00:06] 2026-01-26 17:59:08,446 | INFO     | intersect: 10154173555.831163
[2026-01-26 13:00:06] 2026-01-26 17:59:08,446 | INFO     | chi2: 5.158509375339546
[2026-01-26 13:00:06] 2026-01-26 17:59:08,447 | INFO     | sum of square deviations: 6239768400.220573
[2026-01-26 13:00:06] 2026-01-26 17:59:08,451 | INFO     | sum of deviations: 895410489.2646867
[2026-01-26 13:00:06] 2026-01-26 17:59:08,451 | INFO     | mean x: 1769441752.8308823
[2026-01-26 13:00:06] 2026-01-26 17:59:08,451 | INFO     | mean y: 2531434.3970588236
[2026-01-26 13:00:06] 2026-01-26 17:59:08,451 | INFO     | intersect: -251384513.1197846
[2026-01-26 13:00:06] 2026-01-26 17:59:08,451 | INFO     | chi2: 3.5523561405171216
[2026-01-26 13:00:06] 2026-01-26 17:59:08,452 | INFO     | current chi2=3.5523561405171216 (change=31.135995264459577 %)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,452 | INFO     | sum of square deviations: 5901949545.333351
[2026-01-26 13:00:06] 2026-01-26 17:59:08,462 | INFO     | sum of deviations: 1137022936.6666734
[2026-01-26 13:00:06] 2026-01-26 17:59:08,462 | INFO     | mean x: 1769441600.3333333
[2026-01-26 13:00:06] 2026-01-26 17:59:08,462 | INFO     | mean y: 2531543.4868913856
[2026-01-26 13:00:06] 2026-01-26 17:59:08,462 | INFO     | intersect: -338355085.45116574
[2026-01-26 13:00:06] 2026-01-26 17:59:08,463 | INFO     | chi2: 3.5529859632717433
[2026-01-26 13:00:06] 2026-01-26 17:59:08,463 | INFO     | current chi2=3.5529859632717433 (change=-0.017729718803759127 %)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,463 | INFO     | right removable region: 266
[2026-01-26 13:00:06] 2026-01-26 17:59:08,464 | INFO     | sum of square deviations: 6239763818.1727915
[2026-01-26 13:00:06] 2026-01-26 17:59:08,466 | INFO     | sum of deviations: -111931753818.02939
[2026-01-26 13:00:06] 2026-01-26 17:59:08,467 | INFO     | mean x: 1769442057.8198528
[2026-01-26 13:00:06] 2026-01-26 17:59:08,467 | INFO     | mean y: 2546938.2647058824
[2026-01-26 13:00:06] 2026-01-26 17:59:08,467 | INFO     | intersect: 31743612559.10364
[2026-01-26 13:00:06] 2026-01-26 17:59:08,467 | INFO     | chi2: 2.363389342555857
[2026-01-26 13:00:06] 2026-01-26 17:59:08,467 | INFO     | current chi2=2.363389342555857 (change=54.18464578441726 %)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,468 | INFO     | sum of square deviations: 5901940509.940064
[2026-01-26 13:00:06] 2026-01-26 17:59:08,474 | INFO     | sum of deviations: -128667593443.85388
[2026-01-26 13:00:06] 2026-01-26 17:59:08,474 | INFO     | mean x: 1769442210.318352
[2026-01-26 13:00:06] 2026-01-26 17:59:08,474 | INFO     | mean y: 2554461.786516854
[2026-01-26 13:00:06] 2026-01-26 17:59:08,474 | INFO     | intersect: 38577980723.06341
[2026-01-26 13:00:06] 2026-01-26 17:59:08,475 | INFO     | chi2: 2.1406190998834655
[2026-01-26 13:00:06] 2026-01-26 17:59:08,475 | INFO     | current chi2=2.1406190998834655 (change=9.425879970816812 %)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,475 | INFO     | left removable region: 20
[2026-01-26 13:00:06] 2026-01-26 17:59:08,475 | INFO     | sum of square deviations: 4616012283.483717
[2026-01-26 13:00:06] 2026-01-26 17:59:08,477 | INFO     | sum of deviations: -83795030953.0651
[2026-01-26 13:00:06] 2026-01-26 17:59:08,477 | INFO     | mean x: 1769442179.8252032
[2026-01-26 13:00:06] 2026-01-26 17:59:08,477 | INFO     | mean y: 2571581.300813008
[2026-01-26 13:00:06] 2026-01-26 17:59:08,478 | INFO     | intersect: 32123470123.670322
[2026-01-26 13:00:06] 2026-01-26 17:59:08,478 | INFO     | chi2: 0.40841561095379453
[2026-01-26 13:00:06] 2026-01-26 17:59:08,478 | INFO     | current memory leak: -18.15 B/s (using 246 data points, chi2=0.41)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | could have reported an average CPU frequency of 2696 MHz (13 samples)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | ..............................
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . Timing measurements:
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . get job = 0 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . initial setup = 36 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . payload setup = 38 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . stage-in = 0 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . payload execution = 16893 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . stage-out = 6 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | . log creation = 1 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,484 | INFO     | ..............................
[2026-01-26 13:00:06] 2026-01-26 17:59:08,789 | INFO     | 
[2026-01-26 13:00:06] 2026-01-26 17:59:08,789 | INFO     | job summary report
[2026-01-26 13:00:06] 2026-01-26 17:59:08,789 | INFO     | --------------------------------------------------
[2026-01-26 13:00:06] 2026-01-26 17:59:08,789 | INFO     | PanDA job id: 6983304166
[2026-01-26 13:00:06] 2026-01-26 17:59:08,789 | INFO     | task id: 48310670
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | errors: (none)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | pilot state: finished 
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | transexitcode: 0
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | exeerrorcode: 0
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | exeerrordiag: 
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | exitcode: 0
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | exitmsg: OK
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | cpuconsumptiontime: 39484 s
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | nevents: 400
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | neventsw: 0
[2026-01-26 13:00:06] 2026-01-26 17:59:08,790 | INFO     | pid: 2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | pgrp: 2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | corecount: 8
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | event service: False
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | sizes: {0: 2283099, 1: 2283784, 2: 2283812, 3: 2257200, 4: 2284301, 15: 2284301, 16935: 2316244, 16943: 2325242, 16944: 2325298, 16946: 2325492}
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | --------------------------------------------------
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | 
[2026-01-26 13:00:06] 2026-01-26 17:59:08,791 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | job 6983304166 has completed (purged errors)
[2026-01-26 13:00:06] 2026-01-26 17:59:08,980 | INFO     | overall cleanup function is called
[2026-01-26 13:00:06] 2026-01-26 17:59:10,012 | INFO     | --- collectZombieJob: --- 10, [2503090]
[2026-01-26 13:00:06] 2026-01-26 17:59:10,013 | INFO     | zombie collector waiting for pid 2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:10,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 13:00:06] 2026-01-26 17:59:10,013 | INFO     | collected zombie processes
[2026-01-26 13:00:06] 2026-01-26 17:59:10,013 | INFO     | will attempt to kill all subprocesses of pid=2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:10,580 | INFO     | PID=2493914 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-26 13:00:06] 2026-01-26 17:59:10,580 | INFO     | .. there are 87 such processes running
[2026-01-26 13:00:06] 2026-01-26 17:59:11,520 | INFO     | process IDs to be killed: [2503090] (in reverse order)
[2026-01-26 13:00:06] 2026-01-26 17:59:12,022 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 13:00:06] 2026-01-26 17:59:12,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 13:00:06] 2026-01-26 17:59:12,052 | INFO     | did not find any defunct processes belonging to 2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:12,142 | INFO     | did not find any defunct processes belonging to 2503090
[2026-01-26 13:00:06] 2026-01-26 17:59:12,142 | INFO     | ready for new job
[2026-01-26 13:00:06] 2026-01-26 17:59:12,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 13:00:06] 2026-01-26 17:59:12,170 | INFO     | **************************************
[2026-01-26 13:00:06] 2026-01-26 17:59:12,170 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 13:00:06] 2026-01-26 17:59:12,170 | INFO     | **************************************
[2026-01-26 13:00:06] 2026-01-26 17:59:12,170 | INFO     | 
[2026-01-26 13:00:06] 2026-01-26 17:59:12,200 | INFO     | architecture information:
[2026-01-26 13:00:06] 2026-01-26 17:59:12,200 | INFO     | executing command: cat /etc/os-release
[2026-01-26 13:00:06] 2026-01-26 17:59:12,287 | INFO     | cat /etc/os-release:
[2026-01-26 13:00:06] NAME="CentOS Linux"
[2026-01-26 13:00:06] VERSION="7 (Core)"
[2026-01-26 13:00:06] ID="centos"
[2026-01-26 13:00:06] ID_LIKE="rhel fedora"
[2026-01-26 13:00:06] VERSION_ID="7"
[2026-01-26 13:00:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 13:00:06] ANSI_COLOR="0;31"
[2026-01-26 13:00:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 13:00:06] HOME_URL="https://www.centos.org/"
[2026-01-26 13:00:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 13:00:06] 
[2026-01-26 13:00:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 13:00:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 13:00:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 13:00:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 13:00:06] 
[2026-01-26 13:00:06] 2026-01-26 17:59:12,287 | INFO     | **************************************
[2026-01-26 13:00:06] 2026-01-26 17:59:12,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 13:00:06] 2026-01-26 17:59:12,857 | INFO     | sufficient remaining disk space (90643103744 B)
[2026-01-26 13:00:06] 2026-01-26 17:59:12,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 13:00:06] 2026-01-26 17:59:12,857 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 13:00:06] 2026-01-26 17:59:12,857 | INFO     | update_server=False
[2026-01-26 13:00:06] 2026-01-26 17:59:12,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 13:00:06] 2026-01-26 17:59:12,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 13:00:06] 2026-01-26 17:59:12,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:00:06] 2026-01-26 17:59:12,961 | INFO     | aborting loop
[2026-01-26 13:00:06] 2026-01-26 17:59:13,008 | INFO     | all payload control threads have been joined
[2026-01-26 13:00:06] 2026-01-26 17:59:13,215 | INFO     | all job control threads have been joined
[2026-01-26 13:00:06] 2026-01-26 17:59:13,592 | INFO     | all data control threads have been joined
[2026-01-26 13:00:06] 2026-01-26 17:59:13,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 13:00:06] 2026-01-26 17:59:13,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 13:00:06] 2026-01-26 17:59:13,864 | INFO     | [job] retrieve thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:13,949 | INFO     | [payload] failed_post thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:13,974 | INFO     | [job] job monitor thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,014 | INFO     | [payload] control thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,090 | INFO     | [payload] validate_post thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,099 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,239 | INFO     | [job] control thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,436 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,440 | INFO     | [job] validate thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,597 | INFO     | [data] control thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,853 | INFO     | [job] queue monitor thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,886 | INFO     | [data] copytool_in thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:14,898 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:15,099 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:15,605 | INFO     | [data] copytool_out thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:16,890 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 13:00:06] 2026-01-26 17:59:47,355 | INFO     | PID=2493914 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 13:00:06] 2026-01-26 17:59:47,368 | INFO     | .. there are 86 such processes running
[2026-01-26 13:00:06] 2026-01-26 17:59:47,378 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 13:00:06] 2026-01-26 17:59:47,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 13:00:06] 2026-01-26 17:59:47,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 13:00:06] 2026-01-26 17:59:57,029 | INFO     | [monitor] cgroup control has ended
[2026-01-26 13:00:06] 2026-01-26 17:59:57,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587634845504)>', '<ExcThread(monitor, started 140587273537280)>']
[2026-01-26 13:00:06] 2026-01-26 17:59:58,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 13:00:06] 2026-01-26 17:59:58,475 | INFO     | [monitor] control thread has ended
[2026-01-26 13:00:06] 2026-01-26 18:00:02,815 | INFO     | all workflow threads have been joined
[2026-01-26 13:00:06] 2026-01-26 18:00:02,836 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 13:00:06] 2026-01-26 18:00:02,837 | INFO     | traces error code: 0
[2026-01-26 13:00:06] 2026-01-26 18:00:02,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 13:00:06] 2026-01-26 18:00:04,177 [wrapper] ==== pilot stdout END ====
[2026-01-26 13:00:06] 2026-01-26 18:00:04,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 13:00:06] 2026-01-26 18:00:04,206 [wrapper] pilotpid: 2493914
[2026-01-26 13:00:06] 2026-01-26 18:00:04,232 [wrapper] Pilot exit status: 0
[2026-01-26 13:00:06] 2026-01-26 18:00:04,354 [wrapper] pandaids: 6983304166
[2026-01-26 13:00:06] 2026-01-26 18:00:05,016 [wrapper] cleanup supervisor_pilot  919517 2493915
[2026-01-26 13:00:06] 2026-01-26 18:00:05,029 [wrapper] Test setup, not cleaning
[2026-01-26 13:00:06] 2026-01-26 18:00:05,052 [wrapper] apfmon messages muted
[2026-01-26 13:00:06] 2026-01-26 18:00:05,064 [wrapper] ==== wrapper stdout END ====
[2026-01-26 13:00:06] 2026-01-26 18:00:05,079 [wrapper] ==== wrapper stderr END ====
[2026-01-26 13:00:06]  *** Error codes and diagnostics ***
[2026-01-26 13:00:06]     "exeErrorCode": 0,
[2026-01-26 13:00:06]     "exeErrorDiag": "",
[2026-01-26 13:00:06]     "pilotErrorCode": 0,
[2026-01-26 13:00:06]     "pilotErrorDiag": "",
[2026-01-26 13:00:06]  *** Listing of results directory ***
[2026-01-26 13:00:06] total 673080
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 11:28 pilot3.tar.gz
[2026-01-26 13:00:06] -rwx------. 1 boincer umatlas     36322 Jan 25 11:28 runpilot2-wrapper.sh
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 11:28 queuedata.json
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas       100 Jan 26 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 13:00:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 08:14 run_atlas
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas       105 Jan 26 08:14 job.xml
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas 500721171 Jan 26 08:14 EVNT.48310665._000186.pool.root.1
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas    597767 Jan 26 08:14 input.tar.gz
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 08:14 start_atlas.sh
[2026-01-26 13:00:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 08:14 shared
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas         0 Jan 26 08:14 boinc_lockfile
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas      2521 Jan 26 08:14 pandaJob.out
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas        57 Jan 26 08:14 setup.sh.local
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas   1002189 Jan 26 08:15 agis_schedconf.cvmfs.json
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas       441 Jan 26 08:16 workernode_map.json
[2026-01-26 13:00:06] drwx------. 5 boincer umatlas      4096 Jan 26 08:16 pilot3
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas      6864 Jan 26 12:56 init_data.xml
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas 179754519 Jan 26 12:57 HITS.48310670._010625.pool.root.1
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas       532 Jan 26 12:57 boinc_task_state.xml
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas      1045 Jan 26 12:58 memory_monitor_summary.json
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas   1516246 Jan 26 12:59 agis_ddmendpoints.agis.ALL.json
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas    461312 Jan 26 12:59 log.48310670._010625.job.log.tgz.1
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas      6395 Jan 26 12:59 heartbeat.json
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas        95 Jan 26 12:59 pilot_heartbeat.json
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas      4820 Jan 26 13:00 pilotlog.txt
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 13:00 boinc_mmap_file
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas   1945041 Jan 26 13:00 log.48310670._010625.job.log.1
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas        28 Jan 26 13:00 wrapper_checkpoint.txt
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas       357 Jan 26 13:00 output.list
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas       620 Jan 26 13:00 runtime_log
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas   2426880 Jan 26 13:00 result.tar.gz
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas      9337 Jan 26 13:00 runtime_log.err
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas       654 Jan 26 13:00 cGoMDmk9H48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoq7KDmxg2Zrn.diag
[2026-01-26 13:00:06] -rw-r--r--. 1 boincer umatlas     21277 Jan 26 13:00 stderr.txt
[2026-01-26 13:00:06] HITS file was successfully produced:
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas 179754519 Jan 26 12:57 shared/HITS.pool.root.1
[2026-01-26 13:00:06]  *** Contents of shared directory: ***
[2026-01-26 13:00:06] total 667512
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas 500721171 Jan 26 08:14 ATLAS.root_0
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas    597767 Jan 26 08:14 input.tar.gz
[2026-01-26 13:00:06] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 08:14 start_atlas.sh
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas 179754519 Jan 26 12:57 HITS.pool.root.1
[2026-01-26 13:00:06] -rw-------. 1 boincer umatlas   2426880 Jan 26 13:00 result.tar.gz
13:00:07 (2486749): run_atlas exited; CPU time 40645.218409
13:00:07 (2486749): called boinc_finish(0)

</stderr_txt>
]]>

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