Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:48:16 (56806): wrapper (7.7.26015): starting
16:48:16 (56806): wrapper: running run_atlas (--nthreads 2)
[2026-01-29 16:48:16] Arguments: --nthreads 2
[2026-01-29 16:48:16] Threads: 2
[2026-01-29 16:48:16] Checking for CVMFS
[2026-01-29 16:48:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 16:48:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 16:48:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 16:48:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 16:48:25] 2.13.3.0 1349 1311 45340 155645 2 50 2098459 4096000 0 130560 0 172629 99.968 31467 917 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.10.35.150:3128 1
[2026-01-29 16:48:25] CVMFS is ok
[2026-01-29 16:48:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 16:48:25] Checking for apptainer binary...
[2026-01-29 16:48:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 16:48:25] Running /usr/bin/apptainer --version
[2026-01-29 16:48:25] apptainer version 1.3.1
[2026-01-29 16:48:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 16:48:25] ahanllin04
[2026-01-29 16:48:25] apptainer works
[2026-01-29 16:48:25] Set ATHENA_PROC_NUMBER=2
[2026-01-29 16:48:25] Set ATHENA_CORE_NUMBER=2
[2026-01-29 16:48:25] Starting ATLAS job with PandaID=6983772476
[2026-01-29 16:48:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 21:15:24]  *** The last 200 lines of the pilot log: ***
[2026-01-29 21:15:24] 2026-01-29 20:14:39,854 | INFO     | preparing for final server update for job 6983772476 in state='finished'
[2026-01-29 21:15:24] 2026-01-29 20:14:39,854 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-6983772476/jobReport.json
[2026-01-29 21:15:24] 2026-01-29 20:14:39,858 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-01-29 21:15:24] 2026-01-29 20:14:39,859 | INFO     | this job has now completed (state=finished)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,859 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,859 | INFO     | log transfer has been attempted: DONE
[2026-01-29 21:15:24] 2026-01-29 20:14:39,860 | INFO     | job 6983772476 has finished - writing final server update
[2026-01-29 21:15:24] 2026-01-29 20:14:39,860 | INFO     | total number of processed events: 400 (read)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,862 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6983772476/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,863 | INFO     | extracted standard info from prmon json
[2026-01-29 21:15:24] 2026-01-29 20:14:39,863 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 21:15:24] 2026-01-29 20:14:39,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 21:15:24] 2026-01-29 20:14:39,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 21:15:24] 2026-01-29 20:14:39,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 21:15:24] 2026-01-29 20:14:39,869 | INFO     | fitting pss+swap vs Time
[2026-01-29 21:15:24] 2026-01-29 20:14:39,869 | INFO     | sum of square deviations: 5513070810.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,871 | INFO     | sum of deviations: -50437623690.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,872 | INFO     | mean x: 1769709687.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,872 | INFO     | mean y: 2295841.6091954024
[2026-01-29 21:15:24] 2026-01-29 20:14:39,872 | INFO     | intersect: 16192900734.901628
[2026-01-29 21:15:24] 2026-01-29 20:14:39,872 | INFO     | chi2: 1.7135843896430072
[2026-01-29 21:15:24] 2026-01-29 20:14:39,873 | INFO     | sum of square deviations: 5202255680.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | sum of deviations: -49565312466.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | mean x: 1769709534.5
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | mean y: 2296269.65625
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | intersect: 16863483309.88106
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | chi2: 1.7085412885570177
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | current chi2=1.7085412885570177 (change=0.29430129712141706 %)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,875 | INFO     | right removable region: 255
[2026-01-29 21:15:24] 2026-01-29 20:14:39,876 | INFO     | sum of square deviations: 5202255680.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,876 | INFO     | sum of deviations: -70862431139.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | mean x: 1769709839.5
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | mean y: 2305670.7890625
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | intersect: 24108376066.31016
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | chi2: 0.49147620553160465
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | current chi2=0.49147620553160465 (change=71.31882103372836 %)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,877 | INFO     | sum of square deviations: 4903347750.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | sum of deviations: -57176984088.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | mean x: 1769709992.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | mean y: 2298687.139442231
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | intersect: 20638542578.460144
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | chi2: 0.43851793612213014
[2026-01-29 21:15:24] 2026-01-29 20:14:39,878 | INFO     | current chi2=0.43851793612213014 (change=10.775347578056655 %)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,879 | INFO     | left removable region: 20
[2026-01-29 21:15:24] 2026-01-29 20:14:39,879 | INFO     | sum of square deviations: 4024149870.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | sum of deviations: -28343499574.000004
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | mean x: 1769710114.0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | mean y: 2283517.510638298
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | intersect: 12466972826.47579
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | chi2: 0.2739805304362065
[2026-01-29 21:15:24] 2026-01-29 20:14:39,880 | INFO     | current memory leak: -7.04 B/s (using 235 data points, chi2=0.27)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | could have reported an average CPU frequency of 2099 MHz (12 samples)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | ..............................
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . Timing measurements:
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . get job = 1 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . initial setup = 6 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . payload setup = 7 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . stage-in = 0 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . payload execution = 15921 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . stage-out = 1 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | . log creation = 0 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,881 | INFO     | ..............................
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | 
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | job summary report
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | --------------------------------------------------
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | PanDA job id: 6983772476
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | task id: 48317872
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | errors: (none)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,941 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | pilot state: finished 
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | transexitcode: 0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | exeerrorcode: 0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | exeerrordiag: 
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | exitcode: 0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | exitmsg: OK
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | cpuconsumptiontime: 31253 s
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | nevents: 400
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | neventsw: 0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | pid: 65189
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | pgrp: 65189
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | corecount: 2
[2026-01-29 21:15:24] 2026-01-29 20:14:39,942 | INFO     | event service: False
[2026-01-29 21:15:24] 2026-01-29 20:14:39,943 | INFO     | sizes: {0: 2277892, 1: 2278296, 11: 2278296, 15932: 2310188, 15933: 2310187, 15934: 2319255, 15935: 2319439, 15936: 2319633}
[2026-01-29 21:15:24] 2026-01-29 20:14:39,943 | INFO     | --------------------------------------------------
[2026-01-29 21:15:24] 2026-01-29 20:14:39,943 | INFO     | 
[2026-01-29 21:15:24] 2026-01-29 20:14:39,943 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-29 21:15:24] 2026-01-29 20:14:39,972 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | job 6983772476 has completed (purged errors)
[2026-01-29 21:15:24] 2026-01-29 20:14:39,974 | INFO     | overall cleanup function is called
[2026-01-29 21:15:24] 2026-01-29 20:14:40,982 | INFO     | --- collectZombieJob: --- 10, [65189]
[2026-01-29 21:15:24] 2026-01-29 20:14:40,983 | INFO     | zombie collector waiting for pid 65189
[2026-01-29 21:15:24] 2026-01-29 20:14:40,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 21:15:24] 2026-01-29 20:14:40,983 | INFO     | collected zombie processes
[2026-01-29 21:15:24] 2026-01-29 20:14:40,983 | INFO     | will attempt to kill all subprocesses of pid=65189
[2026-01-29 21:15:24] 2026-01-29 20:14:41,009 | INFO     | process IDs to be killed: [65189] (in reverse order)
[2026-01-29 21:15:24] 2026-01-29 20:14:41,051 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 21:15:24] 2026-01-29 20:14:41,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 21:15:24] 2026-01-29 20:14:41,052 | INFO     | did not find any defunct processes belonging to 65189
[2026-01-29 21:15:24] 2026-01-29 20:14:41,053 | INFO     | did not find any defunct processes belonging to 65189
[2026-01-29 21:15:24] 2026-01-29 20:14:41,053 | INFO     | ready for new job
[2026-01-29 21:15:24] 2026-01-29 20:14:41,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 21:15:24] 2026-01-29 20:14:41,055 | INFO     | **************************************
[2026-01-29 21:15:24] 2026-01-29 20:14:41,055 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 21:15:24] 2026-01-29 20:14:41,055 | INFO     | **************************************
[2026-01-29 21:15:24] 2026-01-29 20:14:41,055 | INFO     | 
[2026-01-29 21:15:24] 2026-01-29 20:14:41,056 | INFO     | pilot is running in a VM
[2026-01-29 21:15:24] 2026-01-29 20:14:41,056 | INFO     | architecture information:
[2026-01-29 21:15:24] 2026-01-29 20:14:41,056 | INFO     | executing command: cat /etc/os-release
[2026-01-29 21:15:24] 2026-01-29 20:14:41,073 | INFO     | cat /etc/os-release:
[2026-01-29 21:15:24] NAME="CentOS Linux"
[2026-01-29 21:15:24] VERSION="7 (Core)"
[2026-01-29 21:15:24] ID="centos"
[2026-01-29 21:15:24] ID_LIKE="rhel fedora"
[2026-01-29 21:15:24] VERSION_ID="7"
[2026-01-29 21:15:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 21:15:24] ANSI_COLOR="0;31"
[2026-01-29 21:15:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 21:15:24] HOME_URL="https://www.centos.org/"
[2026-01-29 21:15:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 21:15:24] 
[2026-01-29 21:15:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 21:15:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 21:15:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 21:15:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 21:15:24] 
[2026-01-29 21:15:24] 2026-01-29 20:14:41,074 | INFO     | **************************************
[2026-01-29 21:15:24] 2026-01-29 20:14:41,577 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-29 21:15:24] 2026-01-29 20:14:41,599 | INFO     | sufficient remaining disk space (19302187008 B)
[2026-01-29 21:15:24] 2026-01-29 20:14:41,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 21:15:24] 2026-01-29 20:14:41,599 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 21:15:24] 2026-01-29 20:14:41,599 | INFO     | update_server=False
[2026-01-29 21:15:24] 2026-01-29 20:14:41,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 21:15:24] 2026-01-29 20:14:41,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:15:24] 2026-01-29 20:14:41,689 | INFO     | all data control threads have been joined
[2026-01-29 21:15:24] 2026-01-29 20:14:41,968 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-29 21:15:24] 2026-01-29 20:14:41,969 | INFO     | all payload control threads have been joined
[2026-01-29 21:15:24] 2026-01-29 20:14:41,969 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-29 21:15:24] 2026-01-29 20:14:41,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 21:15:24] 2026-01-29 20:14:41,970 | INFO     | will abort loop
[2026-01-29 21:15:24] 2026-01-29 20:14:42,353 | INFO     | all job control threads have been joined
[2026-01-29 21:15:24] 2026-01-29 20:14:42,604 | INFO     | [job] queue monitor thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,605 | INFO     | [job] retrieve thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,673 | INFO     | [data] copytool_in thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,696 | INFO     | [data] control thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,757 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 21:15:24] 2026-01-29 20:14:42,975 | INFO     | [payload] control thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:42,976 | INFO     | [job] job monitor thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,168 | INFO     | [payload] failed_post thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,360 | INFO     | [job] control thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,507 | INFO     | [job] validate thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,634 | INFO     | [payload] validate_post thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,709 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:43,867 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:44,864 | INFO     | [data] copytool_out thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:45,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 21:15:24] 2026-01-29 20:14:49,071 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:14:52,104 | INFO     | job.realtimelogging is not enabled
[2026-01-29 21:15:24] 2026-01-29 20:14:53,110 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 21:15:24] 2026-01-29 20:15:11,902 | INFO     | PID=60830 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 21:15:24] 2026-01-29 20:15:11,903 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 21:15:24] 2026-01-29 20:15:11,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 21:15:24] 2026-01-29 20:15:11,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 21:15:24] 2026-01-29 20:15:17,100 | INFO     | [monitor] cgroup control has ended
[2026-01-29 21:15:24] 2026-01-29 20:15:19,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135542735181632)>', '<ExcThread(monitor, started 135542213682944)>']
[2026-01-29 21:15:24] 2026-01-29 20:15:19,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 21:15:24] 2026-01-29 20:15:19,944 | INFO     | [monitor] control thread has ended
[2026-01-29 21:15:24] 2026-01-29 20:15:24,051 | INFO     | all workflow threads have been joined
[2026-01-29 21:15:24] 2026-01-29 20:15:24,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 21:15:24] 2026-01-29 20:15:24,051 | INFO     | traces error code: 0
[2026-01-29 21:15:24] 2026-01-29 20:15:24,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 21:15:24] 2026-01-29 20:15:24,175 [wrapper] ==== pilot stdout END ====
[2026-01-29 21:15:24] 2026-01-29 20:15:24,179 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 21:15:24] 2026-01-29 20:15:24,183 [wrapper] pilotpid: 60830
[2026-01-29 21:15:24] 2026-01-29 20:15:24,187 [wrapper] Pilot exit status: 0
[2026-01-29 21:15:24] 2026-01-29 20:15:24,203 [wrapper] pandaids: 6983772476
[2026-01-29 21:15:24] 2026-01-29 20:15:24,232 [wrapper] cleanup supervisor_pilot   70336 60831
[2026-01-29 21:15:24] 2026-01-29 20:15:24,236 [wrapper] Test setup, not cleaning
[2026-01-29 21:15:24] 2026-01-29 20:15:24,240 [wrapper] apfmon messages muted
[2026-01-29 21:15:24] 2026-01-29 20:15:24,244 [wrapper] ==== wrapper stdout END ====
[2026-01-29 21:15:24] 2026-01-29 20:15:24,248 [wrapper] ==== wrapper stderr END ====
[2026-01-29 21:15:24]  *** Error codes and diagnostics ***
[2026-01-29 21:15:24]     "exeErrorCode": 0,
[2026-01-29 21:15:24]     "exeErrorDiag": "",
[2026-01-29 21:15:24]     "pilotErrorCode": 0,
[2026-01-29 21:15:24]     "pilotErrorDiag": "",
[2026-01-29 21:15:24]  *** Listing of results directory ***
[2026-01-29 21:15:24] total 671300
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:16 pilot3.tar.gz
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:17 queuedata.json
[2026-01-29 21:15:24] -rwx------ 1 boinc boinc     36322 Jan 26 04:17 runpilot2-wrapper.sh
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc       100 Jan 29 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 21:15:24] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 16:48 run_atlas
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc       105 Jan 29 16:48 job.xml
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc 493341120 Jan 29 16:48 EVNT.48317869._000035.pool.root.1
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc     15845 Jan 29 16:48 start_atlas.sh
[2026-01-29 21:15:24] drwxrwx--x 2 boinc boinc      4096 Jan 29 16:48 shared
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc    597749 Jan 29 16:48 input.tar.gz
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc      6402 Jan 29 16:48 init_data.xml
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc         0 Jan 29 16:48 boinc_setup_complete
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc         0 Jan 29 16:48 boinc_lockfile
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc      2513 Jan 29 16:48 pandaJob.out
[2026-01-29 21:15:24] -rw------- 1 boinc boinc        49 Jan 29 16:48 setup.sh.local
[2026-01-29 21:15:24] -rw------- 1 boinc boinc   1010048 Jan 29 16:48 agis_schedconf.cvmfs.json
[2026-01-29 21:15:24] -rw------- 1 boinc boinc       421 Jan 29 16:48 workernode_map.json
[2026-01-29 21:15:24] drwx------ 5 boinc boinc      4096 Jan 29 16:48 pilot3
[2026-01-29 21:15:24] -rw------- 1 boinc boinc 184838746 Jan 29 21:14 HITS.48317872._001731.pool.root.1
[2026-01-29 21:15:24] -rw------- 1 boinc boinc        95 Jan 29 21:14 pilot_heartbeat.json
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc       531 Jan 29 21:14 boinc_task_state.xml
[2026-01-29 21:15:24] -rw------- 1 boinc boinc      1034 Jan 29 21:14 memory_monitor_summary.json
[2026-01-29 21:15:24] -rw------- 1 boinc boinc   1511668 Jan 29 21:14 agis_ddmendpoints.agis.ALL.json
[2026-01-29 21:15:24] -rw------- 1 boinc boinc    395484 Jan 29 21:14 log.48317872._001731.job.log.tgz.1
[2026-01-29 21:15:24] -rw------- 1 boinc boinc      6365 Jan 29 21:14 heartbeat.json
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc        28 Jan 29 21:15 wrapper_checkpoint.txt
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc      8192 Jan 29 21:15 boinc_mmap_file
[2026-01-29 21:15:24] -rw------- 1 boinc boinc      5069 Jan 29 21:15 pilotlog.txt
[2026-01-29 21:15:24] -rw------- 1 boinc boinc   2247131 Jan 29 21:15 log.48317872._001731.job.log.1
[2026-01-29 21:15:24] -rw------- 1 boinc boinc       357 Jan 29 21:15 output.list
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc       620 Jan 29 21:15 runtime_log
[2026-01-29 21:15:24] -rw------- 1 boinc boinc   2662400 Jan 29 21:15 result.tar.gz
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc      9409 Jan 29 21:15 runtime_log.err
[2026-01-29 21:15:24] -rw------- 1 boinc boinc       658 Jan 29 21:15 jAnNDmmHS48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmat8KDmOaVNNm.diag
[2026-01-29 21:15:24] -rw-r--r-- 1 boinc boinc     20930 Jan 29 21:15 stderr.txt
[2026-01-29 21:15:24] HITS file was successfully produced:
[2026-01-29 21:15:24] -rw------- 1 boinc boinc 184838746 Jan 29 21:14 shared/HITS.pool.root.1
[2026-01-29 21:15:24]  *** Contents of shared directory: ***
[2026-01-29 21:15:24] total 665496
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc 493341120 Jan 29 16:48 ATLAS.root_0
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc     15845 Jan 29 16:48 start_atlas.sh
[2026-01-29 21:15:24] -rw-r--r-- 2 boinc boinc    597749 Jan 29 16:48 input.tar.gz
[2026-01-29 21:15:24] -rw------- 1 boinc boinc 184838746 Jan 29 21:14 HITS.pool.root.1
[2026-01-29 21:15:24] -rw------- 1 boinc boinc   2662400 Jan 29 21:15 result.tar.gz
21:15:25 (56806): run_atlas exited; CPU time 31287.369113
21:15:25 (56806): called boinc_finish(0)

</stderr_txt>
]]>

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