Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:10 (387842): wrapper (7.7.26015): starting
05:47:10 (387842): wrapper: running run_atlas (--nthreads 6)
[2026-01-27 05:47:10] Arguments: --nthreads 6
[2026-01-27 05:47:10] Threads: 6
[2026-01-27 05:47:10] Checking for CVMFS
[2026-01-27 05:47:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 05:47:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 05:47:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 05:47:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 05:47:12] 2.13.3.0 240502 623 52560 155573 2 50 24527585 81920001 0 130560 0 491126 99.989 27412 6404 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://147.213.204.101:3128 1
[2026-01-27 05:47:12] CVMFS is ok
[2026-01-27 05:47:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 05:47:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 05:47:12] Further information can be found at the LHC@home message board.
[2026-01-27 05:47:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 05:47:12] Checking for apptainer binary...
[2026-01-27 05:47:12] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2026-01-27 05:47:12] apptainer is not installed, using version from CVMFS
[2026-01-27 05:47:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 05:47:13] monitor-atlas.iep
[2026-01-27 05:47:13] apptainer works
[2026-01-27 05:47:13] Set ATHENA_PROC_NUMBER=6
[2026-01-27 05:47:13] Set ATHENA_CORE_NUMBER=6
[2026-01-27 05:47:13] Starting ATLAS job with PandaID=6984063162
[2026-01-27 05:47:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 06:40:32]  *** The last 200 lines of the pilot log: ***
[2026-01-27 06:40:32]  status_code=0
[2026-01-27 06:40:32]  storage_token=
[2026-01-27 06:40:32]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6984063162/log.48317952._000622.job.log.tgz.1
[2026-01-27 06:40:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/d9/log.48317952._000622.job.log.tgz.1
[2026-01-27 06:40:32]  workdir=None
[2026-01-27 06:40:32] ]
[2026-01-27 06:40:32] 2026-01-27 05:39:47,341 | INFO     | transferring file log.48317952._000622.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/log.48317952._000622.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-27 06:40:32] 2026-01-27 05:39:47,341 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/log.48317952._000622.job.log.tgz.1 /var/lib/boinc/slots/0/log.48317952._000622.job
[2026-01-27 06:40:32] 2026-01-27 05:39:47,347 | INFO     | adding to output.list: log.48317952._000622.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/d9/log.48317952._000622.job.log.tg
[2026-01-27 06:40:32] 2026-01-27 05:39:47,347 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 06:40:32] 2026-01-27 05:39:47,347 | INFO     | summary of transferred files:
[2026-01-27 06:40:32] 2026-01-27 05:39:47,347 | INFO     |  -- lfn=log.48317952._000622.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 06:40:32] 2026-01-27 05:39:47,347 | INFO     | stage-out finished correctly
[2026-01-27 06:40:32] 2026-01-27 05:39:48,095 | WARNING  | process 396352 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 06:40:32] 2026-01-27 05:39:48,095 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4337643 B
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16076 B
[2026-01-27 06:40:32] 2026-01-27 05:39:48,096 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | sufficient remaining disk space (863054594048 B)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6984063162: 4625059 B (within 5033164800 B limit)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6984063162/HITS.48317952._000622.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | total size of present files: 0 B (workdir size: 4625059 B)
[2026-01-27 06:40:32] 2026-01-27 05:39:48,102 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/HITS.48317952._000622.pool.root.1 since it does not exist
[2026-01-27 06:40:32] 2026-01-27 05:39:48,133 | INFO     | number of running child processes to parent process 396352: 1
[2026-01-27 06:40:32] 2026-01-27 05:39:48,133 | INFO     | maximum number of monitored processes: 6
[2026-01-27 06:40:32] 2026-01-27 05:39:49,225 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 06:40:32] 2026-01-27 05:39:49,310 | INFO     | time since job start (3149s) is within the limit (349056.0s)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,433 | INFO     | job 6984063162 has state=finished
[2026-01-27 06:40:32] 2026-01-27 05:39:50,433 | INFO     | preparing for final server update for job 6984063162 in state='finished'
[2026-01-27 06:40:32] 2026-01-27 05:39:50,433 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/jobReport.json
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | this job has now completed (state=finished)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | log transfer has been attempted: DONE
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | job 6984063162 has finished - writing final server update
[2026-01-27 06:40:32] 2026-01-27 05:39:50,434 | INFO     | total number of processed events: 400 (read)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,435 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6984063162/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,435 | INFO     | extracted standard info from prmon json
[2026-01-27 06:40:32] 2026-01-27 05:39:50,435 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 06:40:32] 2026-01-27 05:39:50,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | fitting pss+swap vs Time
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | sum of square deviations: 28242390.0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | sum of deviations: -6240880110.0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | mean x: 1769490902.0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | mean y: 2671959.933333333
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | intersect: 391017050527.6735
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | chi2: 0.07524229202246635
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | current memory leak: -220.98 B/s (using 45 data points, chi2=0.08)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,436 | INFO     | could have reported an average CPU frequency of 4300 MHz (5 samples)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | ..............................
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . Timing measurements:
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . get job = 0 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . initial setup = 3 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . payload setup = 1 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . stage-in = 0 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . payload execution = 3130 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . stage-out = 0 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | . log creation = 0 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,437 | INFO     | ..............................
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | 
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | job summary report
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | --------------------------------------------------
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | PanDA job id: 6984063162
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | task id: 48317952
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | errors: (none)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | pilot state: finished 
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | transexitcode: 0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | exeerrorcode: 0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | exeerrordiag: 
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | exitcode: 0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | exitmsg: OK
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | cpuconsumptiontime: 17548 s
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | nevents: 400
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | neventsw: 0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | pid: 396352
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | pgrp: 396352
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | corecount: 6
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | event service: False
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | sizes: {0: 2283800, 1: 2284261, 11: 2284261, 3136: 2318734, 3138: 2318762, 3140: 2318988}
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | --------------------------------------------------
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | 
[2026-01-27 06:40:32] 2026-01-27 05:39:50,465 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | job 6984063162 has completed (purged errors)
[2026-01-27 06:40:32] 2026-01-27 05:39:50,475 | INFO     | overall cleanup function is called
[2026-01-27 06:40:32] 2026-01-27 05:39:51,476 | INFO     | --- collectZombieJob: --- 10, [396352]
[2026-01-27 06:40:32] 2026-01-27 05:39:51,476 | INFO     | zombie collector waiting for pid 396352
[2026-01-27 06:40:32] 2026-01-27 05:39:51,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 06:40:32] 2026-01-27 05:39:51,476 | INFO     | collected zombie processes
[2026-01-27 06:40:32] 2026-01-27 05:39:51,476 | INFO     | will attempt to kill all subprocesses of pid=396352
[2026-01-27 06:40:32] 2026-01-27 05:39:51,506 | INFO     | process IDs to be killed: [396352] (in reverse order)
[2026-01-27 06:40:32] 2026-01-27 05:39:51,522 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 06:40:32] 2026-01-27 05:39:51,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 06:40:32] 2026-01-27 05:39:51,523 | INFO     | did not find any defunct processes belonging to 396352
[2026-01-27 06:40:32] 2026-01-27 05:39:51,523 | INFO     | did not find any defunct processes belonging to 396352
[2026-01-27 06:40:32] 2026-01-27 05:39:51,523 | INFO     | ready for new job
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | **************************************
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | **************************************
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | 
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | architecture information:
[2026-01-27 06:40:32] 2026-01-27 05:39:51,524 | INFO     | executing command: cat /etc/os-release
[2026-01-27 06:40:32] 2026-01-27 05:39:51,530 | INFO     | cat /etc/os-release:
[2026-01-27 06:40:32] NAME="CentOS Linux"
[2026-01-27 06:40:32] VERSION="7 (Core)"
[2026-01-27 06:40:32] ID="centos"
[2026-01-27 06:40:32] ID_LIKE="rhel fedora"
[2026-01-27 06:40:32] VERSION_ID="7"
[2026-01-27 06:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 06:40:32] ANSI_COLOR="0;31"
[2026-01-27 06:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 06:40:32] HOME_URL="https://www.centos.org/"
[2026-01-27 06:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 06:40:32] 
[2026-01-27 06:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 06:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 06:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 06:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 06:40:32] 
[2026-01-27 06:40:32] 2026-01-27 05:39:51,530 | INFO     | **************************************
[2026-01-27 06:40:32] 2026-01-27 05:39:52,033 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 06:40:32] 2026-01-27 05:39:52,038 | INFO     | sufficient remaining disk space (863059836928 B)
[2026-01-27 06:40:32] 2026-01-27 05:39:52,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 06:40:32] 2026-01-27 05:39:52,038 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 06:40:32] 2026-01-27 05:39:52,039 | INFO     | update_server=False
[2026-01-27 06:40:32] 2026-01-27 05:39:52,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 06:40:32] 2026-01-27 05:39:52,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:40:32] 2026-01-27 05:39:52,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:40:32] 2026-01-27 05:39:52,039 | INFO     | aborting loop
[2026-01-27 06:40:32] 2026-01-27 05:39:52,719 | INFO     | all job control threads have been joined
[2026-01-27 06:40:32] 2026-01-27 05:39:52,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 06:40:32] 2026-01-27 05:39:52,983 | INFO     | all payload control threads have been joined
[2026-01-27 06:40:32] 2026-01-27 05:39:52,994 | INFO     | all data control threads have been joined
[2026-01-27 06:40:32] 2026-01-27 05:39:53,043 | INFO     | [job] job monitor thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,044 | INFO     | [job] retrieve thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,044 | INFO     | [job] queue monitor thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,687 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,724 | INFO     | [job] control thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,951 | INFO     | [payload] failed_post thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,983 | INFO     | [payload] control thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:53,999 | INFO     | [data] control thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,218 | INFO     | [job] validate thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,252 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,289 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,377 | INFO     | [data] copytool_in thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,482 | INFO     | [payload] validate_post thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:54,891 | INFO     | [data] copytool_out thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:39:55,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 06:40:32] 2026-01-27 05:39:59,266 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:40:02,902 | INFO     | job.realtimelogging is not enabled
[2026-01-27 06:40:32] 2026-01-27 05:40:03,907 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 06:40:32] 2026-01-27 05:40:22,428 | INFO     | PID=391846 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 06:40:32] 2026-01-27 05:40:22,428 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 06:40:32] 2026-01-27 05:40:22,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 06:40:32] 2026-01-27 05:40:22,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 06:40:32] 2026-01-27 05:40:24,963 | INFO     | [monitor] cgroup control has ended
[2026-01-27 06:40:32] 2026-01-27 05:40:26,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338895275840)>', '<ExcThread(monitor, started 140338324829952)>']
[2026-01-27 06:40:32] 2026-01-27 05:40:27,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 06:40:32] 2026-01-27 05:40:27,454 | INFO     | [monitor] control thread has ended
[2026-01-27 06:40:32] 2026-01-27 05:40:31,923 | INFO     | all workflow threads have been joined
[2026-01-27 06:40:32] 2026-01-27 05:40:31,923 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 06:40:32] 2026-01-27 05:40:31,924 | INFO     | traces error code: 0
[2026-01-27 06:40:32] 2026-01-27 05:40:31,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 06:40:32] 2026-01-27 05:40:31,966 [wrapper] ==== pilot stdout END ====
[2026-01-27 06:40:32] 2026-01-27 05:40:31,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 06:40:32] 2026-01-27 05:40:31,968 [wrapper] pilotpid: 391846
[2026-01-27 06:40:32] 2026-01-27 05:40:31,969 [wrapper] Pilot exit status: 0
[2026-01-27 06:40:32] 2026-01-27 05:40:31,972 [wrapper] pandaids: 6984063162
[2026-01-27 06:40:32] 2026-01-27 05:40:31,980 [wrapper] cleanup supervisor_pilot  401068 391847
[2026-01-27 06:40:32] 2026-01-27 05:40:31,981 [wrapper] Test setup, not cleaning
[2026-01-27 06:40:32] 2026-01-27 05:40:31,982 [wrapper] apfmon messages muted
[2026-01-27 06:40:32] 2026-01-27 05:40:31,983 [wrapper] ==== wrapper stdout END ====
[2026-01-27 06:40:32] 2026-01-27 05:40:31,983 [wrapper] ==== wrapper stderr END ====
[2026-01-27 06:40:32]  *** Error codes and diagnostics ***
[2026-01-27 06:40:32]     "exeErrorCode": 0,
[2026-01-27 06:40:32]     "exeErrorDiag": "",
[2026-01-27 06:40:32]     "pilotErrorCode": 0,
[2026-01-27 06:40:32]     "pilotErrorDiag": "",
[2026-01-27 06:40:32]  *** Listing of results directory ***
[2026-01-27 06:40:32] total 671768
[2026-01-27 06:40:32] -rwx------ 1 boinc boinc     36322 Jan 26 08:41 runpilot2-wrapper.sh
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc    584422 Jan 26 08:45 pilot3.tar.gz
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc      5111 Jan 26 08:45 queuedata.json
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc       100 Jan 27 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 06:40:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 05:47 run_atlas
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc       105 Jan 27 05:47 job.xml
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:47 start_atlas.sh
[2026-01-27 06:40:32] drwxrwx--x 2 boinc boinc        68 Jan 27 05:47 shared
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc    597752 Jan 27 05:47 input.tar.gz
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc      6533 Jan 27 05:47 init_data.xml
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc 498612163 Jan 27 05:47 EVNT.48317949._000012.pool.root.1
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc         0 Jan 27 05:47 boinc_lockfile
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc      2517 Jan 27 05:47 pandaJob.out
[2026-01-27 06:40:32] -rw------- 1 boinc boinc   1006441 Jan 27 05:47 agis_schedconf.cvmfs.json
[2026-01-27 06:40:32] -rw------- 1 boinc boinc   1516246 Jan 27 05:47 agis_ddmendpoints.agis.ALL.json
[2026-01-27 06:40:32] -rw------- 1 boinc boinc       435 Jan 27 05:47 workernode_map.json
[2026-01-27 06:40:32] drwx------ 5 boinc boinc      4096 Jan 27 05:47 pilot3
[2026-01-27 06:40:32] -rw------- 1 boinc boinc 183766530 Jan 27 06:39 HITS.48317952._000622.pool.root.1
[2026-01-27 06:40:32] -rw------- 1 boinc boinc        95 Jan 27 06:39 pilot_heartbeat.json
[2026-01-27 06:40:32] -rw------- 1 boinc boinc      1017 Jan 27 06:39 memory_monitor_summary.json
[2026-01-27 06:40:32] -rw------- 1 boinc boinc    313703 Jan 27 06:39 log.48317952._000622.job.log.tgz.1
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc       530 Jan 27 06:39 boinc_task_state.xml
[2026-01-27 06:40:32] -rw------- 1 boinc boinc      6348 Jan 27 06:39 heartbeat.json
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc        27 Jan 27 06:40 wrapper_checkpoint.txt
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc      8192 Jan 27 06:40 boinc_mmap_file
[2026-01-27 06:40:32] -rw------- 1 boinc boinc      4816 Jan 27 06:40 pilotlog.txt
[2026-01-27 06:40:32] -rw------- 1 boinc boinc    480182 Jan 27 06:40 log.48317952._000622.job.log.1
[2026-01-27 06:40:32] -rw------- 1 boinc boinc       357 Jan 27 06:40 output.list
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc       620 Jan 27 06:40 runtime_log
[2026-01-27 06:40:32] -rw------- 1 boinc boinc    808960 Jan 27 06:40 result.tar.gz
[2026-01-27 06:40:32] -rw------- 1 boinc boinc       654 Jan 27 06:40 UmqNDmcPW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFw2KDmXtJ8um.diag
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc      8829 Jan 27 06:40 runtime_log.err
[2026-01-27 06:40:32] -rw-r--r-- 1 boinc boinc     22517 Jan 27 06:40 stderr.txt
[2026-01-27 06:40:32] HITS file was successfully produced:
[2026-01-27 06:40:32] -rw------- 1 boinc boinc 183766530 Jan 27 06:39 shared/HITS.pool.root.1
[2026-01-27 06:40:32]  *** Contents of shared directory: ***
[2026-01-27 06:40:32] total 667780
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc     15845 Jan 27 05:47 start_atlas.sh
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc    597752 Jan 27 05:47 input.tar.gz
[2026-01-27 06:40:32] -rw-r--r-- 2 boinc boinc 498612163 Jan 27 05:47 ATLAS.root_0
[2026-01-27 06:40:32] -rw------- 1 boinc boinc 183766530 Jan 27 06:39 HITS.pool.root.1
[2026-01-27 06:40:32] -rw------- 1 boinc boinc    808960 Jan 27 06:40 result.tar.gz
06:40:34 (387842): run_atlas exited; CPU time 17561.965527
06:40:34 (387842): called boinc_finish(0)

</stderr_txt>
]]>

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