Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:56:14 (20065): wrapper (7.7.26015): starting
22:56:14 (20065): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 22:56:14] Arguments: --nthreads 8
[2026-01-26 22:56:14] Threads: 8
[2026-01-26 22:56:14] Checking for CVMFS
[2026-01-26 22:56:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:56:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:56:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:56:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:56:15] 2.11.2.0 3013 28047 85812 155571 0 52 17884217 20275201 1 130560 0 10066026 99.841 2479961 25752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 22:56:15] CVMFS is ok
[2026-01-26 22:56:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:56:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:56:15] Further information can be found at the LHC@home message board.
[2026-01-26 22:56:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:56:15] Checking for apptainer binary...
[2026-01-26 22:56:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:56:15] Running /usr/bin/apptainer --version
[2026-01-26 22:56:15] apptainer version 1.3.2-1.el7
[2026-01-26 22:56:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:56:16] c-115-10.aglt2.org
[2026-01-26 22:56:16] apptainer works
[2026-01-26 22:56:16] Set ATHENA_PROC_NUMBER=8
[2026-01-26 22:56:16] Set ATHENA_CORE_NUMBER=8
[2026-01-26 22:56:16] Starting ATLAS job with PandaID=6984061783
[2026-01-26 22:56:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:47:57]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:47:57] 2026-01-27 05:47:18,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,290 | INFO     | log transfer has been attempted: DONE
[2026-01-27 00:47:57] 2026-01-27 05:47:18,290 | INFO     | job 6984061783 has finished - writing final server update
[2026-01-27 00:47:57] 2026-01-27 05:47:18,290 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,293 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6984061783/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,293 | INFO     | extracted standard info from prmon json
[2026-01-27 00:47:57] 2026-01-27 05:47:18,294 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:47:57] 2026-01-27 05:47:18,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:47:57] 2026-01-27 05:47:18,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:47:57] 2026-01-27 05:47:18,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:47:57] 2026-01-27 05:47:18,296 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:47:57] 2026-01-27 05:47:18,296 | INFO     | sum of square deviations: 401533110.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,297 | INFO     | sum of deviations: 1035863204.000001
[2026-01-27 00:47:57] 2026-01-27 05:47:18,297 | INFO     | mean x: 1769489520.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,297 | INFO     | mean y: 2489138.853211009
[2026-01-27 00:47:57] 2026-01-27 05:47:18,297 | INFO     | intersect: -4562387425.452092
[2026-01-27 00:47:57] 2026-01-27 05:47:18,298 | INFO     | chi2: 2.1957283372473686
[2026-01-27 00:47:57] 2026-01-27 05:47:18,298 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,298 | INFO     | sum of deviations: 8064148760.000001
[2026-01-27 00:47:57] 2026-01-27 05:47:18,298 | INFO     | mean x: 1769489367.5
[2026-01-27 00:47:57] 2026-01-27 05:47:18,299 | INFO     | mean y: 2508675.4615384615
[2026-01-27 00:47:57] 2026-01-27 05:47:18,299 | INFO     | intersect: -40911139003.244354
[2026-01-27 00:47:57] 2026-01-27 05:47:18,299 | INFO     | chi2: 1.4304946863132686
[2026-01-27 00:47:57] 2026-01-27 05:47:18,299 | INFO     | current chi2=1.4304946863132686 (change=34.85101676528072 %)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,299 | INFO     | sum of square deviations: 300842850.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | sum of deviations: 7708219128.000001
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | mean x: 1769489215.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | mean y: 2507542.131313131
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | intersect: -45335484083.23956
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | chi2: 1.4337517887142834
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | current chi2=1.4337517887142834 (change=-0.22769063263067313 %)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,300 | INFO     | right removable region: 98
[2026-01-27 00:47:57] 2026-01-27 05:47:18,301 | INFO     | sum of square deviations: 348769330.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,301 | INFO     | sum of deviations: -13619040133.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,301 | INFO     | mean x: 1769489672.5
[2026-01-27 00:47:57] 2026-01-27 05:47:18,301 | INFO     | mean y: 2530502.5576923075
[2026-01-27 00:47:57] 2026-01-27 05:47:18,302 | INFO     | intersect: 69099061624.45
[2026-01-27 00:47:57] 2026-01-27 05:47:18,302 | INFO     | chi2: 0.8765764164254086
[2026-01-27 00:47:57] 2026-01-27 05:47:18,302 | INFO     | current chi2=0.8765764164254086 (change=60.07810248856599 %)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,302 | INFO     | sum of square deviations: 300842850.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,302 | INFO     | sum of deviations: -10093015470.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | mean x: 1769489825.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | mean y: 2519251.8080808083
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | intersect: 59367360988.05873
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | chi2: 0.8603281235928959
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | current chi2=0.8603281235928959 (change=1.853608256855876 %)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,303 | INFO     | left removable region: 20
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | sum of square deviations: 147126479.5
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | sum of deviations: 618892458.0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | mean x: 1769489794.5
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | mean y: 2526808.3333333335
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | intersect: -7440891208.910938
[2026-01-27 00:47:57] 2026-01-27 05:47:18,304 | INFO     | chi2: 0.00044016225144716085
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | current memory leak: 4.21 B/s (using 78 data points, chi2=0.00)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | ..............................
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | . Timing measurements:
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | . get job = 0 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | . initial setup = 8 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,305 | INFO     | . payload setup = 8 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,306 | INFO     | . stage-in = 0 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,306 | INFO     | . payload execution = 6613 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,306 | INFO     | . stage-out = 0 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,306 | INFO     | . log creation = 0 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,306 | INFO     | ..............................
[2026-01-27 00:47:57] 2026-01-27 05:47:18,875 | INFO     | 
[2026-01-27 00:47:57] 2026-01-27 05:47:18,875 | INFO     | job summary report
[2026-01-27 00:47:57] 2026-01-27 05:47:18,875 | INFO     | --------------------------------------------------
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | PanDA job id: 6984061783
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | task id: 48317872
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | errors: (none)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | pilot state: finished 
[2026-01-27 00:47:57] 2026-01-27 05:47:18,876 | INFO     | transexitcode: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | exeerrorcode: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | exeerrordiag: 
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | exitcode: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | exitmsg: OK
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | cpuconsumptiontime: 49290 s
[2026-01-27 00:47:57] 2026-01-27 05:47:18,877 | INFO     | nevents: 400
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | neventsw: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | pid: 28432
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | pgrp: 28432
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | corecount: 8
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | event service: False
[2026-01-27 00:47:57] 2026-01-27 05:47:18,878 | INFO     | sizes: {0: 2283802, 1: 2284263, 12: 2284263, 6624: 2311370, 6626: 2320562}
[2026-01-27 00:47:57] 2026-01-27 05:47:18,879 | INFO     | --------------------------------------------------
[2026-01-27 00:47:57] 2026-01-27 05:47:18,879 | INFO     | 
[2026-01-27 00:47:57] 2026-01-27 05:47:18,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 00:47:57] 2026-01-27 05:47:18,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:47:57] 2026-01-27 05:47:18,914 | INFO     | job 6984061783 has completed (purged errors)
[2026-01-27 00:47:57] 2026-01-27 05:47:18,914 | INFO     | overall cleanup function is called
[2026-01-27 00:47:57] 2026-01-27 05:47:19,918 | INFO     | --- collectZombieJob: --- 10, [28432]
[2026-01-27 00:47:57] 2026-01-27 05:47:19,918 | INFO     | zombie collector waiting for pid 28432
[2026-01-27 00:47:57] 2026-01-27 05:47:19,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:47:57] 2026-01-27 05:47:19,918 | INFO     | collected zombie processes
[2026-01-27 00:47:57] 2026-01-27 05:47:19,919 | INFO     | will attempt to kill all subprocesses of pid=28432
[2026-01-27 00:47:57] 2026-01-27 05:47:20,004 | INFO     | process IDs to be killed: [28432] (in reverse order)
[2026-01-27 00:47:57] 2026-01-27 05:47:20,060 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:47:57] 2026-01-27 05:47:20,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:47:57] 2026-01-27 05:47:20,065 | INFO     | did not find any defunct processes belonging to 28432
[2026-01-27 00:47:57] 2026-01-27 05:47:20,067 | INFO     | did not find any defunct processes belonging to 28432
[2026-01-27 00:47:57] 2026-01-27 05:47:20,067 | INFO     | ready for new job
[2026-01-27 00:47:57] 2026-01-27 05:47:20,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:47:57] 2026-01-27 05:47:20,069 | INFO     | **************************************
[2026-01-27 00:47:57] 2026-01-27 05:47:20,069 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:47:57] 2026-01-27 05:47:20,069 | INFO     | **************************************
[2026-01-27 00:47:57] 2026-01-27 05:47:20,069 | INFO     | 
[2026-01-27 00:47:57] 2026-01-27 05:47:20,070 | INFO     | architecture information:
[2026-01-27 00:47:57] 2026-01-27 05:47:20,070 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:47:57] 2026-01-27 05:47:20,090 | INFO     | cat /etc/os-release:
[2026-01-27 00:47:57] NAME="CentOS Linux"
[2026-01-27 00:47:57] VERSION="7 (Core)"
[2026-01-27 00:47:57] ID="centos"
[2026-01-27 00:47:57] ID_LIKE="rhel fedora"
[2026-01-27 00:47:57] VERSION_ID="7"
[2026-01-27 00:47:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:47:57] ANSI_COLOR="0;31"
[2026-01-27 00:47:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:47:57] HOME_URL="https://www.centos.org/"
[2026-01-27 00:47:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:47:57] 
[2026-01-27 00:47:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:47:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:47:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:47:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:47:57] 
[2026-01-27 00:47:57] 2026-01-27 05:47:20,090 | INFO     | **************************************
[2026-01-27 00:47:57] 2026-01-27 05:47:20,592 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 00:47:57] 2026-01-27 05:47:20,613 | INFO     | sufficient remaining disk space (17297309696 B)
[2026-01-27 00:47:57] 2026-01-27 05:47:20,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:47:57] 2026-01-27 05:47:20,614 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:47:57] 2026-01-27 05:47:20,614 | INFO     | update_server=False
[2026-01-27 00:47:57] 2026-01-27 05:47:20,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:47:57] 2026-01-27 05:47:20,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:47:57] 2026-01-27 05:47:21,177 | INFO     | all data control threads have been joined
[2026-01-27 00:47:57] 2026-01-27 05:47:21,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:47:57] 2026-01-27 05:47:21,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:47:57] 2026-01-27 05:47:21,228 | INFO     | aborting loop
[2026-01-27 00:47:57] 2026-01-27 05:47:21,343 | INFO     | all payload control threads have been joined
[2026-01-27 00:47:57] 2026-01-27 05:47:21,620 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:21,734 | INFO     | all job control threads have been joined
[2026-01-27 00:47:57] 2026-01-27 05:47:21,752 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,183 | INFO     | [data] control thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,232 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,349 | INFO     | [payload] control thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,389 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,394 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,400 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,459 | INFO     | job.realtimelogging is not enabled
[2026-01-27 00:47:57] 2026-01-27 05:47:22,736 | INFO     | [job] control thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:22,812 | INFO     | [job] validate thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:23,100 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:23,215 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:23,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:47:57] 2026-01-27 05:47:23,465 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:24,399 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:24,617 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:47:57] 2026-01-27 05:47:50,904 | INFO     | PID=24052 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 00:47:57] 2026-01-27 05:47:50,905 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:47:57] 2026-01-27 05:47:50,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:47:57] 2026-01-27 05:47:50,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:47:57] 2026-01-27 05:47:51,174 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:47:57] 2026-01-27 05:47:52,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091564267328)>', '<ExcThread(monitor, started 140090584049408)>']
[2026-01-27 00:47:57] 2026-01-27 05:47:52,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:47:57] 2026-01-27 05:47:52,915 | INFO     | [monitor] control thread has ended
[2026-01-27 00:47:57] 2026-01-27 05:47:57,205 | INFO     | all workflow threads have been joined
[2026-01-27 00:47:57] 2026-01-27 05:47:57,205 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:47:57] 2026-01-27 05:47:57,206 | INFO     | traces error code: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:57,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:47:57] 2026-01-27 05:47:57,317 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:47:57] 2026-01-27 05:47:57,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:47:57] 2026-01-27 05:47:57,327 [wrapper] pilotpid: 24052
[2026-01-27 00:47:57] 2026-01-27 05:47:57,332 [wrapper] Pilot exit status: 0
[2026-01-27 00:47:57] 2026-01-27 05:47:57,352 [wrapper] pandaids: 6984061783
[2026-01-27 00:47:57] 2026-01-27 05:47:57,396 [wrapper] cleanup supervisor_pilot  6518 24053
[2026-01-27 00:47:57] 2026-01-27 05:47:57,401 [wrapper] Test setup, not cleaning
[2026-01-27 00:47:57] 2026-01-27 05:47:57,406 [wrapper] apfmon messages muted
[2026-01-27 00:47:57] 2026-01-27 05:47:57,410 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:47:57] 2026-01-27 05:47:57,414 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:47:57]  *** Error codes and diagnostics ***
[2026-01-27 00:47:57]     "exeErrorCode": 0,
[2026-01-27 00:47:57]     "exeErrorDiag": "",
[2026-01-27 00:47:57]     "pilotErrorCode": 0,
[2026-01-27 00:47:57]     "pilotErrorDiag": "",
[2026-01-27 00:47:57]  *** Listing of results directory ***
[2026-01-27 00:47:57] total 664984
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 02:37 pilot3.tar.gz
[2026-01-27 00:47:57] -rwx------ 1 boincer umatlas     36322 Jan 26 02:40 runpilot2-wrapper.sh
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 02:43 queuedata.json
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas       100 Jan 26 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:47:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 22:56 run_atlas
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas       105 Jan 26 22:56 job.xml
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas 494740458 Jan 26 22:56 EVNT.48317869._000056.pool.root.1
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 22:56 start_atlas.sh
[2026-01-27 00:47:57] drwxrwx--x 2 boincer umatlas      4096 Jan 26 22:56 shared
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas    597754 Jan 26 22:56 input.tar.gz
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas         0 Jan 26 22:56 boinc_lockfile
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas      2516 Jan 26 22:56 pandaJob.out
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas        57 Jan 26 22:56 setup.sh.local
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas   1006433 Jan 26 22:56 agis_schedconf.cvmfs.json
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas   1516246 Jan 26 22:56 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas       433 Jan 26 22:56 workernode_map.json
[2026-01-27 00:47:57] drwx------ 5 boincer umatlas      4096 Jan 26 22:56 pilot3
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas      5910 Jan 27 00:45 init_data.xml
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas 179610066 Jan 27 00:46 HITS.48317872._002798.pool.root.1
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas       530 Jan 27 00:46 boinc_task_state.xml
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas        95 Jan 27 00:47 pilot_heartbeat.json
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas      1048 Jan 27 00:47 memory_monitor_summary.json
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas    380728 Jan 27 00:47 log.48317872._002798.job.log.tgz.1
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas      6402 Jan 27 00:47 heartbeat.json
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas      8192 Jan 27 00:47 boinc_mmap_file
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas        27 Jan 27 00:47 wrapper_checkpoint.txt
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas      4814 Jan 27 00:47 pilotlog.txt
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas    944258 Jan 27 00:47 log.48317872._002798.job.log.1
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas       357 Jan 27 00:47 output.list
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas       620 Jan 27 00:47 runtime_log
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas   1341440 Jan 27 00:47 result.tar.gz
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas      9341 Jan 27 00:47 runtime_log.err
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas       658 Jan 27 00:47 AogNDmcOW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnt2KDmNdoH3m.diag
[2026-01-27 00:47:57] -rw-r--r-- 1 boincer umatlas     20982 Jan 27 00:47 stderr.txt
[2026-01-27 00:47:57] HITS file was successfully produced:
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas 179610066 Jan 27 00:46 shared/HITS.pool.root.1
[2026-01-27 00:47:57]  *** Contents of shared directory: ***
[2026-01-27 00:47:57] total 660468
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas 494740458 Jan 26 22:56 ATLAS.root_0
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 22:56 start_atlas.sh
[2026-01-27 00:47:57] -rw-r--r-- 2 boincer umatlas    597754 Jan 26 22:56 input.tar.gz
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas 179610066 Jan 27 00:46 HITS.pool.root.1
[2026-01-27 00:47:57] -rw------- 1 boincer umatlas   1341440 Jan 27 00:47 result.tar.gz
00:47:59 (20065): run_atlas exited; CPU time 49302.097118
00:47:59 (20065): called boinc_finish(0)

</stderr_txt>
]]>

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