Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:28:43 (2766418): wrapper (7.7.26015): starting
19:28:43 (2766418): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 19:28:43] Arguments: --nthreads 4
[2026-01-27 19:28:43] Threads: 4
[2026-01-27 19:28:43] Checking for CVMFS
[2026-01-27 19:28:43] No cvmfs_config command found, will try listing directly
[2026-01-27 19:28:43] CVMFS is ok
[2026-01-27 19:28:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 19:28:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 19:28:43] Further information can be found at the LHC@home message board.
[2026-01-27 19:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 19:28:43] Checking for apptainer binary...
[2026-01-27 19:28:43] which: no apptainer in ((null))
[2026-01-27 19:28:43] apptainer is not installed, using version from CVMFS
[2026-01-27 19:28:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 19:28:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-01-27 19:28:43] apptainer works
[2026-01-27 19:28:43] Set ATHENA_PROC_NUMBER=4
[2026-01-27 19:28:43] Set ATHENA_CORE_NUMBER=4
[2026-01-27 19:28:43] Starting ATLAS job with PandaID=6984229273
[2026-01-27 19:28:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 23:05:22]  *** The last 200 lines of the pilot log: ***
[2026-01-27 23:05:22] 2026-01-27 21:57:27,645 | INFO     | total number of processed events: 400 (read)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,657 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6984229273/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,657 | INFO     | extracted standard info from prmon json
[2026-01-27 23:05:22] 2026-01-27 21:57:27,657 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 23:05:22] 2026-01-27 21:57:27,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 23:05:22] 2026-01-27 21:57:27,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 23:05:22] 2026-01-27 21:57:27,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 23:05:22] 2026-01-27 21:57:27,662 | INFO     | fitting pss+swap vs Time
[2026-01-27 23:05:22] 2026-01-27 21:57:27,662 | INFO     | sum of square deviations: 2671343110.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,664 | INFO     | sum of deviations: -51513005866.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,664 | INFO     | mean x: 1769544788.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,664 | INFO     | mean y: 2378842.2975609754
[2026-01-27 23:05:22] 2026-01-27 21:57:27,664 | INFO     | intersect: 34125502413.793297
[2026-01-27 23:05:22] 2026-01-27 21:57:27,664 | INFO     | chi2: 2.470300575348091
[2026-01-27 23:05:22] 2026-01-27 21:57:27,665 | INFO     | sum of square deviations: 2480604650.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,666 | INFO     | sum of deviations: -37273276397.999985
[2026-01-27 23:05:22] 2026-01-27 21:57:27,666 | INFO     | mean x: 1769544635.5
[2026-01-27 23:05:22] 2026-01-27 21:57:27,666 | INFO     | mean y: 2390021.12
[2026-01-27 23:05:22] 2026-01-27 21:57:27,666 | INFO     | intersect: 26591361503.371166
[2026-01-27 23:05:22] 2026-01-27 21:57:27,667 | INFO     | chi2: 1.6594895335860078
[2026-01-27 23:05:22] 2026-01-27 21:57:27,667 | INFO     | current chi2=1.6594895335860078 (change=32.82236379869812 %)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,667 | INFO     | sum of square deviations: 2299168690.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,668 | INFO     | sum of deviations: -36329684722.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,668 | INFO     | mean x: 1769544483.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,670 | INFO     | mean y: 2390814.38974359
[2026-01-27 23:05:22] 2026-01-27 21:57:27,670 | INFO     | intersect: 27963363599.27248
[2026-01-27 23:05:22] 2026-01-27 21:57:27,670 | INFO     | chi2: 1.6524817331424355
[2026-01-27 23:05:22] 2026-01-27 21:57:27,670 | INFO     | current chi2=1.6524817331424355 (change=0.4222865105047738 %)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,671 | INFO     | right removable region: 194
[2026-01-27 23:05:22] 2026-01-27 21:57:27,671 | INFO     | sum of square deviations: 2480604650.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,672 | INFO     | sum of deviations: -73195969455.5
[2026-01-27 23:05:22] 2026-01-27 21:57:27,672 | INFO     | mean x: 1769544940.5
[2026-01-27 23:05:22] 2026-01-27 21:57:27,672 | INFO     | mean y: 2395885.695
[2026-01-27 23:05:22] 2026-01-27 21:57:27,672 | INFO     | intersect: 52216906333.77167
[2026-01-27 23:05:22] 2026-01-27 21:57:27,673 | INFO     | chi2: 1.2260472463325318
[2026-01-27 23:05:22] 2026-01-27 21:57:27,673 | INFO     | current chi2=1.2260472463325318 (change=50.368499341025775 %)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,673 | INFO     | sum of square deviations: 2299168690.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,674 | INFO     | sum of deviations: -63508396860.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,674 | INFO     | mean x: 1769545093.0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,674 | INFO     | mean y: 2387736.5794871794
[2026-01-27 23:05:22] 2026-01-27 21:57:27,675 | INFO     | intersect: 48881346691.04821
[2026-01-27 23:05:22] 2026-01-27 21:57:27,675 | INFO     | chi2: 1.2043970588836446
[2026-01-27 23:05:22] 2026-01-27 21:57:27,675 | INFO     | current chi2=1.2043970588836446 (change=1.7658526222092445 %)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,675 | INFO     | left removable region: 20
[2026-01-27 23:05:22] 2026-01-27 21:57:27,675 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 23:05:22] 2026-01-27 21:57:27,676 | INFO     | sum of deviations: -29006348601.500008
[2026-01-27 23:05:22] 2026-01-27 21:57:27,676 | INFO     | mean x: 1769545062.5
[2026-01-27 23:05:22] 2026-01-27 21:57:27,677 | INFO     | mean y: 2381323.8333333335
[2026-01-27 23:05:22] 2026-01-27 21:57:27,677 | INFO     | intersect: 31425035419.155594
[2026-01-27 23:05:22] 2026-01-27 21:57:27,677 | INFO     | chi2: 0.27650211190971585
[2026-01-27 23:05:22] 2026-01-27 21:57:27,677 | INFO     | current memory leak: -17.76 B/s (using 174 data points, chi2=0.28)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | could have reported an average CPU frequency of 2584 MHz (10 samples)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | ..............................
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . Timing measurements:
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . get job = 0 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . initial setup = 6 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . payload setup = 6 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . stage-in = 0 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . payload execution = 12480 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . stage-out = 1 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,678 | INFO     | . log creation = 0 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,679 | INFO     | ..............................
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | 
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | job summary report
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | --------------------------------------------------
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | PanDA job id: 6984229273
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | task id: 48318026
[2026-01-27 23:05:22] 2026-01-27 21:57:27,767 | INFO     | errors: (none)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | pilot state: finished 
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | transexitcode: 0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | exeerrorcode: 0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | exeerrordiag: 
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | exitcode: 0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | exitmsg: OK
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | cpuconsumptiontime: 48273 s
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | nevents: 400
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | neventsw: 0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | pid: 2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | pgrp: 2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:27,768 | INFO     | corecount: 4
[2026-01-27 23:05:22] 2026-01-27 21:57:27,769 | INFO     | event service: False
[2026-01-27 23:05:22] 2026-01-27 21:57:27,769 | INFO     | sizes: {0: 2283812, 1: 2284273, 11: 2284273, 12491: 2314007, 12493: 2323083, 12494: 2323221}
[2026-01-27 23:05:22] 2026-01-27 21:57:27,769 | INFO     | --------------------------------------------------
[2026-01-27 23:05:22] 2026-01-27 21:57:27,769 | INFO     | 
[2026-01-27 23:05:22] 2026-01-27 21:57:27,769 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-01-27 23:05:22] 2026-01-27 21:57:27,790 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,790 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,790 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,790 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,792 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,792 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 23:05:22] 2026-01-27 21:57:27,792 | INFO     | job 6984229273 has completed (purged errors)
[2026-01-27 23:05:22] 2026-01-27 21:57:27,792 | INFO     | overall cleanup function is called
[2026-01-27 23:05:22] 2026-01-27 21:57:28,800 | INFO     | --- collectZombieJob: --- 10, [2775423]
[2026-01-27 23:05:22] 2026-01-27 21:57:28,800 | INFO     | zombie collector waiting for pid 2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:28,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 23:05:22] 2026-01-27 21:57:28,800 | INFO     | collected zombie processes
[2026-01-27 23:05:22] 2026-01-27 21:57:28,801 | INFO     | will attempt to kill all subprocesses of pid=2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:29,215 | INFO     | process IDs to be killed: [2775423] (in reverse order)
[2026-01-27 23:05:22] 2026-01-27 21:57:29,343 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 23:05:22] 2026-01-27 21:57:29,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 23:05:22] 2026-01-27 21:57:29,357 | INFO     | did not find any defunct processes belonging to 2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:29,370 | INFO     | did not find any defunct processes belonging to 2775423
[2026-01-27 23:05:22] 2026-01-27 21:57:29,371 | INFO     | ready for new job
[2026-01-27 23:05:22] 2026-01-27 21:57:29,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 23:05:22] 2026-01-27 21:57:29,373 | INFO     | **************************************
[2026-01-27 23:05:22] 2026-01-27 21:57:29,374 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 23:05:22] 2026-01-27 21:57:29,374 | INFO     | **************************************
[2026-01-27 23:05:22] 2026-01-27 21:57:29,374 | INFO     | 
[2026-01-27 23:05:22] 2026-01-27 21:57:29,378 | INFO     | architecture information:
[2026-01-27 23:05:22] 2026-01-27 21:57:29,378 | INFO     | executing command: cat /etc/os-release
[2026-01-27 23:05:22] 2026-01-27 21:57:29,394 | INFO     | cat /etc/os-release:
[2026-01-27 23:05:22] NAME="CentOS Linux"
[2026-01-27 23:05:22] VERSION="7 (Core)"
[2026-01-27 23:05:22] ID="centos"
[2026-01-27 23:05:22] ID_LIKE="rhel fedora"
[2026-01-27 23:05:22] VERSION_ID="7"
[2026-01-27 23:05:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 23:05:22] ANSI_COLOR="0;31"
[2026-01-27 23:05:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 23:05:22] HOME_URL="https://www.centos.org/"
[2026-01-27 23:05:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 23:05:22] 
[2026-01-27 23:05:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 23:05:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 23:05:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 23:05:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 23:05:22] 
[2026-01-27 23:05:22] 2026-01-27 21:57:29,395 | INFO     | **************************************
[2026-01-27 23:05:22] 2026-01-27 21:57:29,898 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-01-27 23:05:22] 2026-01-27 21:57:29,915 | INFO     | sufficient remaining disk space (686680965120 B)
[2026-01-27 23:05:22] 2026-01-27 21:57:29,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 23:05:22] 2026-01-27 21:57:29,916 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 23:05:22] 2026-01-27 21:57:29,916 | INFO     | update_server=False
[2026-01-27 23:05:22] 2026-01-27 21:57:29,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 23:05:22] 2026-01-27 21:57:29,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 23:05:22] 2026-01-27 21:57:29,972 | INFO     | all data control threads have been joined
[2026-01-27 23:05:22] 2026-01-27 21:57:30,323 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 23:05:22] 2026-01-27 21:57:30,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 23:05:22] 2026-01-27 21:57:30,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:05:22] 2026-01-27 21:57:30,324 | INFO     | will abort loop
[2026-01-27 23:05:22] 2026-01-27 21:57:30,567 | INFO     | all job control threads have been joined
[2026-01-27 23:05:22] 2026-01-27 21:57:30,778 | INFO     | all payload control threads have been joined
[2026-01-27 23:05:22] 2026-01-27 21:57:30,921 | INFO     | [job] retrieve thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:30,978 | INFO     | [data] control thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,120 | INFO     | job.realtimelogging is not enabled
[2026-01-27 23:05:22] 2026-01-27 21:57:31,329 | INFO     | [job] job monitor thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,400 | INFO     | [data] copytool_in thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,565 | INFO     | [payload] failed_post thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,572 | INFO     | [job] control thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,784 | INFO     | [payload] control thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,895 | INFO     | [job] validate thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:31,922 | INFO     | [data] copytool_out thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,002 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,053 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,248 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,483 | INFO     | [payload] validate_post thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:32,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:05:22] 2026-01-27 21:57:32,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 23:05:22] 2026-01-27 21:57:33,783 | INFO     | [job] queue monitor thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:37,004 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 23:05:22] 2026-01-27 21:57:59,464 | INFO     | PID=2770608 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 23:05:22] 2026-01-27 21:57:59,464 | INFO     | .. there are 4 such processes running
[2026-01-27 23:05:22] 2026-01-27 21:57:59,465 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 23:05:22] 2026-01-27 21:57:59,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 23:05:22] 2026-01-27 21:57:59,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 23:05:22] 2026-01-27 21:58:22,911 | INFO     | [monitor] cgroup control has ended
[2026-01-27 23:05:22] 2026-01-27 21:58:24,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22891184314176)>', '<ExcThread(monitor, started 22890937579264)>']
[2026-01-27 23:05:22] 2026-01-27 21:58:25,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 23:05:22] 2026-01-27 21:58:25,601 | INFO     | [monitor] control thread has ended
[2026-01-27 23:05:22] 2026-01-27 21:58:29,685 | INFO     | all workflow threads have been joined
[2026-01-27 23:05:22] 2026-01-27 21:58:29,686 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 23:05:22] 2026-01-27 21:58:29,686 | INFO     | traces error code: 0
[2026-01-27 23:05:22] 2026-01-27 21:58:29,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 23:05:22] 2026-01-27 21:58:29,862 [wrapper] ==== pilot stdout END ====
[2026-01-27 23:05:22] 2026-01-27 21:58:29,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 23:05:22] 2026-01-27 21:58:29,868 [wrapper] pilotpid: 2770608
[2026-01-27 23:05:22] 2026-01-27 21:58:29,871 [wrapper] Pilot exit status: 0
[2026-01-27 23:05:22] 2026-01-27 21:58:29,882 [wrapper] pandaids: 6984229273
[2026-01-27 23:05:22] 2026-01-27 21:58:29,969 [wrapper] cleanup supervisor_pilot 2896309 2770609
[2026-01-27 23:05:22] 2026-01-27 21:58:29,972 [wrapper] Test setup, not cleaning
[2026-01-27 23:05:22] 2026-01-27 21:58:29,975 [wrapper] apfmon messages muted
[2026-01-27 23:05:22] 2026-01-27 21:58:29,978 [wrapper] ==== wrapper stdout END ====
[2026-01-27 23:05:22] 2026-01-27 21:58:29,981 [wrapper] ==== wrapper stderr END ====
[2026-01-27 23:05:22]  *** Error codes and diagnostics ***
[2026-01-27 23:05:22]     "exeErrorCode": 0,
[2026-01-27 23:05:22]     "exeErrorDiag": "",
[2026-01-27 23:05:22]     "pilotErrorCode": 0,
[2026-01-27 23:05:22]     "pilotErrorDiag": "",
[2026-01-27 23:05:22]  *** Listing of results directory ***
[2026-01-27 23:05:22] total 733392
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc    584422 Jan 26 12:54 pilot3.tar.gz
[2026-01-27 23:05:22] -rwx------ 1 boinc boinc     36322 Jan 26 12:57 runpilot2-wrapper.sh
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc      5111 Jan 26 13:00 queuedata.json
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc       100 Jan 27 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 23:05:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 19:28 run_atlas
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc       105 Jan 27 19:28 job.xml
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc      6639 Jan 27 19:28 init_data.xml
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc 537327186 Jan 27 19:28 EVNT.48318024._000028.pool.root.1
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc     15845 Jan 27 19:28 start_atlas.sh
[2026-01-27 23:05:22] drwxrwx--x 2 boinc boinc      4096 Jan 27 19:28 shared
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc    597773 Jan 27 19:28 input.tar.gz
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc         0 Jan 27 19:28 boinc_lockfile
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc      2524 Jan 27 19:28 pandaJob.out
[2026-01-27 23:05:22] -rw------- 1 boinc boinc   1005244 Jan 27 19:28 agis_schedconf.cvmfs.json
[2026-01-27 23:05:22] -rw------- 1 boinc boinc       447 Jan 27 19:29 workernode_map.json
[2026-01-27 23:05:22] drwx------ 5 boinc boinc      4096 Jan 27 19:29 pilot3
[2026-01-27 23:05:22] -rw------- 1 boinc boinc 205392600 Jan 27 22:56 HITS.48318026._001395.pool.root.1
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc       530 Jan 27 22:57 boinc_task_state.xml
[2026-01-27 23:05:22] -rw------- 1 boinc boinc      1036 Jan 27 22:57 memory_monitor_summary.json
[2026-01-27 23:05:22] -rw------- 1 boinc boinc   1516246 Jan 27 22:57 agis_ddmendpoints.agis.ALL.json
[2026-01-27 23:05:22] -rw------- 1 boinc boinc    404093 Jan 27 22:57 log.48318026._001395.job.log.tgz.1
[2026-01-27 23:05:22] -rw------- 1 boinc boinc      6406 Jan 27 22:57 heartbeat.json
[2026-01-27 23:05:22] -rw------- 1 boinc boinc        95 Jan 27 22:57 pilot_heartbeat.json
[2026-01-27 23:05:22] -rw------- 1 boinc boinc      5087 Jan 27 22:58 pilotlog.txt
[2026-01-27 23:05:22] -rw------- 1 boinc boinc   1762200 Jan 27 22:58 log.48318026._001395.job.log.1
[2026-01-27 23:05:22] -rw------- 1 boinc boinc       357 Jan 27 22:58 output.list
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc       620 Jan 27 22:58 runtime_log
[2026-01-27 23:05:22] -rw------- 1 boinc boinc   2181120 Jan 27 22:58 result.tar.gz
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc      9205 Jan 27 22:58 runtime_log.err
[2026-01-27 23:05:22] -rw------- 1 boinc boinc       666 Jan 27 22:58 39NMDm4Oa48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIw9KDmasPuXo.diag
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc        26 Jan 27 23:04 wrapper_checkpoint.txt
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc      8192 Jan 27 23:05 boinc_mmap_file
[2026-01-27 23:05:22] -rw-r--r-- 1 boinc boinc     20794 Jan 27 23:05 stderr.txt
[2026-01-27 23:05:22] HITS file was successfully produced:
[2026-01-27 23:05:22] -rw------- 1 boinc boinc 205392600 Jan 27 22:56 shared/HITS.pool.root.1
[2026-01-27 23:05:22]  *** Contents of shared directory: ***
[2026-01-27 23:05:22] total 728056
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc 537327186 Jan 27 19:28 ATLAS.root_0
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc     15845 Jan 27 19:28 start_atlas.sh
[2026-01-27 23:05:22] -rw-r--r-- 2 boinc boinc    597773 Jan 27 19:28 input.tar.gz
[2026-01-27 23:05:22] -rw------- 1 boinc boinc 205392600 Jan 27 22:56 HITS.pool.root.1
[2026-01-27 23:05:22] -rw------- 1 boinc boinc   2181120 Jan 27 22:58 result.tar.gz
23:05:24 (2766418): run_atlas exited; CPU time 48806.066558
23:05:24 (2766418): called boinc_finish(0)

</stderr_txt>
]]>

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