Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:49:06 (18421): wrapper (7.7.26015): starting
01:49:06 (18421): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 01:49:06] Arguments: --nthreads 8
[2026-01-27 01:49:06] Threads: 8
[2026-01-27 01:49:06] Checking for CVMFS
[2026-01-27 01:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 01:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 01:49:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 01:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 01:49:07] 2.11.2.0 26356 196522 141784 155575 0 188 18279935 18432001 1833 130560 0 133805869 99.981 7639170 23555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-27 01:49:07] CVMFS is ok
[2026-01-27 01:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 01:49:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 01:49:07] Further information can be found at the LHC@home message board.
[2026-01-27 01:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 01:49:07] Checking for apptainer binary...
[2026-01-27 01:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 01:49:07] Running /usr/bin/apptainer --version
[2026-01-27 01:49:07] apptainer version 1.3.2-1.el7
[2026-01-27 01:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 01:49:07] c-206-6.aglt2.org
[2026-01-27 01:49:07] apptainer works
[2026-01-27 01:49:08] Set ATHENA_PROC_NUMBER=8
[2026-01-27 01:49:08] Set ATHENA_CORE_NUMBER=8
[2026-01-27 01:49:08] Starting ATLAS job with PandaID=6984228805
[2026-01-27 01:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 05:04:47]  *** The last 200 lines of the pilot log: ***
[2026-01-27 05:04:47] 2026-01-27 10:03:59,664 | INFO     | total number of processed events: 400 (read)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,667 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6984228805/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,667 | INFO     | extracted standard info from prmon json
[2026-01-27 05:04:47] 2026-01-27 10:03:59,667 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 05:04:47] 2026-01-27 10:03:59,668 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 05:04:47] 2026-01-27 10:03:59,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 05:04:47] 2026-01-27 10:03:59,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 05:04:47] 2026-01-27 10:03:59,671 | INFO     | fitting pss+swap vs Time
[2026-01-27 05:04:47] 2026-01-27 10:03:59,671 | INFO     | sum of square deviations: 2194675568.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,672 | INFO     | sum of deviations: 26438163262.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,672 | INFO     | mean x: 1769502399.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,672 | INFO     | mean y: 2457133.984375
[2026-01-27 05:04:47] 2026-01-27 10:03:59,672 | INFO     | intersect: -21313856772.949543
[2026-01-27 05:04:47] 2026-01-27 10:03:59,673 | INFO     | chi2: 2.364169067388929
[2026-01-27 05:04:47] 2026-01-27 10:03:59,673 | INFO     | sum of square deviations: 2027639878.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,674 | INFO     | sum of deviations: 38602928595.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,674 | INFO     | mean x: 1769502247.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,674 | INFO     | mean y: 2467988.7326203207
[2026-01-27 05:04:47] 2026-01-27 10:03:59,674 | INFO     | intersect: -33685944648.431473
[2026-01-27 05:04:47] 2026-01-27 10:03:59,674 | INFO     | chi2: 1.5446634669923633
[2026-01-27 05:04:47] 2026-01-27 10:03:59,675 | INFO     | current chi2=1.5446634669923633 (change=34.66357849363355 %)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,675 | INFO     | sum of square deviations: 1869302025.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | sum of deviations: 37465139149.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | mean x: 1769502094.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | mean y: 2466892.4725274723
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | intersect: -35462450649.22702
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | chi2: 1.5449062047963837
[2026-01-27 05:04:47] 2026-01-27 10:03:59,676 | INFO     | current chi2=1.5449062047963837 (change=-0.01571460769335323 %)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,677 | INFO     | right removable region: 181
[2026-01-27 05:04:47] 2026-01-27 10:03:59,677 | INFO     | sum of square deviations: 2027639878.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | sum of deviations: -4375720319.999998
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | mean x: 1769502552.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | mean y: 2484965.7326203207
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | intersect: 3821135583.669546
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | chi2: 0.885312094699465
[2026-01-27 05:04:47] 2026-01-27 10:03:59,678 | INFO     | current chi2=0.885312094699465 (change=62.552927922484216 %)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,679 | INFO     | sum of square deviations: 1869302025.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | sum of deviations: -9895950913.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | mean x: 1769502704.5
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | mean y: 2490258.324175824
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | intersect: 9370110721.022644
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | chi2: 0.8496427500420147
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | current chi2=0.8496427500420147 (change=4.029013595432569 %)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,680 | INFO     | left removable region: 20
[2026-01-27 05:04:47] 2026-01-27 10:03:59,681 | INFO     | sum of square deviations: 1294014960.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,681 | INFO     | sum of deviations: 3462514329.999999
[2026-01-27 05:04:47] 2026-01-27 10:03:59,681 | INFO     | mean x: 1769502674.0
[2026-01-27 05:04:47] 2026-01-27 10:03:59,682 | INFO     | mean y: 2501292.813664596
[2026-01-27 05:04:47] 2026-01-27 10:03:59,682 | INFO     | intersect: -4732319057.0981455
[2026-01-27 05:04:47] 2026-01-27 10:03:59,682 | INFO     | chi2: 0.0014619101741750581
[2026-01-27 05:04:47] 2026-01-27 10:03:59,682 | INFO     | current memory leak: 2.68 B/s (using 161 data points, chi2=0.00)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,682 | INFO     | could have reported an average CPU frequency of 2538 MHz (10 samples)
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | ..............................
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . Timing measurements:
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . get job = 0 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . initial setup = 5 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . payload setup = 5 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . stage-in = 0 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . payload execution = 11661 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . stage-out = 2 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | . log creation = 0 s
[2026-01-27 05:04:47] 2026-01-27 10:03:59,683 | INFO     | ..............................
[2026-01-27 05:04:47] 2026-01-27 10:04:00,029 | INFO     | 
[2026-01-27 05:04:47] 2026-01-27 10:04:00,030 | INFO     | job summary report
[2026-01-27 05:04:47] 2026-01-27 10:04:00,030 | INFO     | --------------------------------------------------
[2026-01-27 05:04:47] 2026-01-27 10:04:00,030 | INFO     | PanDA job id: 6984228805
[2026-01-27 05:04:47] 2026-01-27 10:04:00,030 | INFO     | task id: 48317952
[2026-01-27 05:04:47] 2026-01-27 10:04:00,030 | INFO     | errors: (none)
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | pilot state: finished 
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | transexitcode: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | exeerrorcode: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | exeerrordiag: 
[2026-01-27 05:04:47] 2026-01-27 10:04:00,031 | INFO     | exitcode: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | exitmsg: OK
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | cpuconsumptiontime: 87144 s
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | nevents: 400
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | neventsw: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | pid: 26776
[2026-01-27 05:04:47] 2026-01-27 10:04:00,032 | INFO     | pgrp: 26776
[2026-01-27 05:04:47] 2026-01-27 10:04:00,033 | INFO     | corecount: 8
[2026-01-27 05:04:47] 2026-01-27 10:04:00,033 | INFO     | event service: False
[2026-01-27 05:04:47] 2026-01-27 10:04:00,033 | INFO     | sizes: {0: 2283147, 1: 2284265, 2: 2284265, 11670: 2313754, 11673: 2322752, 11675: 2323130}
[2026-01-27 05:04:47] 2026-01-27 10:04:00,033 | INFO     | --------------------------------------------------
[2026-01-27 05:04:47] 2026-01-27 10:04:00,033 | INFO     | 
[2026-01-27 05:04:47] 2026-01-27 10:04:00,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-27 05:04:47] 2026-01-27 10:04:00,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,056 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 05:04:47] 2026-01-27 10:04:00,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,057 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 05:04:47] 2026-01-27 10:04:00,057 | INFO     | job 6984228805 has completed (purged errors)
[2026-01-27 05:04:47] 2026-01-27 10:04:00,057 | INFO     | overall cleanup function is called
[2026-01-27 05:04:47] 2026-01-27 10:04:01,069 | INFO     | --- collectZombieJob: --- 10, [26776]
[2026-01-27 05:04:47] 2026-01-27 10:04:01,069 | INFO     | zombie collector waiting for pid 26776
[2026-01-27 05:04:47] 2026-01-27 10:04:01,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 05:04:47] 2026-01-27 10:04:01,069 | INFO     | collected zombie processes
[2026-01-27 05:04:47] 2026-01-27 10:04:01,069 | INFO     | will attempt to kill all subprocesses of pid=26776
[2026-01-27 05:04:47] 2026-01-27 10:04:01,251 | INFO     | process IDs to be killed: [26776] (in reverse order)
[2026-01-27 05:04:47] 2026-01-27 10:04:01,307 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 05:04:47] 2026-01-27 10:04:01,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 05:04:47] 2026-01-27 10:04:01,313 | INFO     | did not find any defunct processes belonging to 26776
[2026-01-27 05:04:47] 2026-01-27 10:04:01,318 | INFO     | did not find any defunct processes belonging to 26776
[2026-01-27 05:04:47] 2026-01-27 10:04:01,319 | INFO     | ready for new job
[2026-01-27 05:04:47] 2026-01-27 10:04:01,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 05:04:47] 2026-01-27 10:04:01,321 | INFO     | **************************************
[2026-01-27 05:04:47] 2026-01-27 10:04:01,321 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 05:04:47] 2026-01-27 10:04:01,321 | INFO     | **************************************
[2026-01-27 05:04:47] 2026-01-27 10:04:01,321 | INFO     | 
[2026-01-27 05:04:47] 2026-01-27 10:04:01,322 | INFO     | architecture information:
[2026-01-27 05:04:47] 2026-01-27 10:04:01,323 | INFO     | executing command: cat /etc/os-release
[2026-01-27 05:04:47] 2026-01-27 10:04:01,347 | INFO     | cat /etc/os-release:
[2026-01-27 05:04:47] NAME="CentOS Linux"
[2026-01-27 05:04:47] VERSION="7 (Core)"
[2026-01-27 05:04:47] ID="centos"
[2026-01-27 05:04:47] ID_LIKE="rhel fedora"
[2026-01-27 05:04:47] VERSION_ID="7"
[2026-01-27 05:04:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 05:04:47] ANSI_COLOR="0;31"
[2026-01-27 05:04:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 05:04:47] HOME_URL="https://www.centos.org/"
[2026-01-27 05:04:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 05:04:47] 
[2026-01-27 05:04:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 05:04:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 05:04:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 05:04:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 05:04:47] 
[2026-01-27 05:04:47] 2026-01-27 10:04:01,347 | INFO     | **************************************
[2026-01-27 05:04:47] 2026-01-27 10:04:01,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-27 05:04:47] 2026-01-27 10:04:01,861 | INFO     | sufficient remaining disk space (26516389888 B)
[2026-01-27 05:04:47] 2026-01-27 10:04:01,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 05:04:47] 2026-01-27 10:04:01,861 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 05:04:47] 2026-01-27 10:04:01,861 | INFO     | update_server=False
[2026-01-27 05:04:47] 2026-01-27 10:04:01,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 05:04:47] 2026-01-27 10:04:01,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 05:04:47] 2026-01-27 10:04:02,060 | INFO     | all payload control threads have been joined
[2026-01-27 05:04:47] 2026-01-27 10:04:02,109 | INFO     | all job control threads have been joined
[2026-01-27 05:04:47] 2026-01-27 10:04:02,196 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 05:04:47] 2026-01-27 10:04:02,196 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 05:04:47] 2026-01-27 10:04:02,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:04:47] 2026-01-27 10:04:02,196 | INFO     | will abort loop
[2026-01-27 05:04:47] 2026-01-27 10:04:02,231 | INFO     | all data control threads have been joined
[2026-01-27 05:04:47] 2026-01-27 10:04:02,869 | INFO     | [job] retrieve thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:02,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 05:04:47] 2026-01-27 10:04:03,065 | INFO     | [payload] control thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,112 | INFO     | [job] control thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,174 | INFO     | [job] validate thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,202 | INFO     | [job] job monitor thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,236 | INFO     | [data] control thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,305 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,598 | INFO     | [data] copytool_in thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:03,920 | INFO     | [payload] validate_post thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:04,087 | INFO     | [payload] failed_post thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:04,310 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:04,314 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:04,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 05:04:47] 2026-01-27 10:04:04,971 | INFO     | [data] copytool_out thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:05,820 | INFO     | [job] queue monitor thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:05,868 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 05:04:47] 2026-01-27 10:04:17,751 [wrapper] supervise_pilot (15 min periods counter: 14)
[2026-01-27 05:04:47] 2026-01-27 10:04:31,851 | INFO     | PID=22378 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 05:04:47] 2026-01-27 10:04:31,852 | INFO     | .. there are 3 such processes running
[2026-01-27 05:04:47] 2026-01-27 10:04:31,853 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 05:04:47] 2026-01-27 10:04:31,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 05:04:47] 2026-01-27 10:04:31,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 05:04:47] 2026-01-27 10:04:41,591 | INFO     | [monitor] cgroup control has ended
[2026-01-27 05:04:47] 2026-01-27 10:04:41,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994337728320)>', '<ExcThread(monitor, started 139993745958656)>']
[2026-01-27 05:04:47] 2026-01-27 10:04:42,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 05:04:47] 2026-01-27 10:04:42,910 | INFO     | [monitor] control thread has ended
[2026-01-27 05:04:47] 2026-01-27 10:04:46,958 | INFO     | all workflow threads have been joined
[2026-01-27 05:04:47] 2026-01-27 10:04:46,958 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 05:04:47] 2026-01-27 10:04:46,958 | INFO     | traces error code: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:46,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 05:04:47] 2026-01-27 10:04:47,089 [wrapper] ==== pilot stdout END ====
[2026-01-27 05:04:47] 2026-01-27 10:04:47,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 05:04:47] 2026-01-27 10:04:47,093 [wrapper] pilotpid: 22378
[2026-01-27 05:04:47] 2026-01-27 10:04:47,095 [wrapper] Pilot exit status: 0
[2026-01-27 05:04:47] 2026-01-27 10:04:47,103 [wrapper] pandaids: 6984228805
[2026-01-27 05:04:47] 2026-01-27 10:04:47,130 [wrapper] cleanup supervisor_pilot  9151 22379
[2026-01-27 05:04:47] 2026-01-27 10:04:47,133 [wrapper] Test setup, not cleaning
[2026-01-27 05:04:47] 2026-01-27 10:04:47,137 [wrapper] apfmon messages muted
[2026-01-27 05:04:47] 2026-01-27 10:04:47,141 [wrapper] ==== wrapper stdout END ====
[2026-01-27 05:04:47] 2026-01-27 10:04:47,145 [wrapper] ==== wrapper stderr END ====
[2026-01-27 05:04:47]  *** Error codes and diagnostics ***
[2026-01-27 05:04:47]     "exeErrorCode": 0,
[2026-01-27 05:04:47]     "exeErrorDiag": "",
[2026-01-27 05:04:47]     "pilotErrorCode": 0,
[2026-01-27 05:04:47]     "pilotErrorDiag": "",
[2026-01-27 05:04:47]  *** Listing of results directory ***
[2026-01-27 05:04:47] total 674608
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas    584422 Jan 26 06:54 pilot3.tar.gz
[2026-01-27 05:04:47] -rwx------ 1 boincer umatlas     36322 Jan 26 06:57 runpilot2-wrapper.sh
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas      5111 Jan 26 07:00 queuedata.json
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas       100 Jan 27 01:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 05:04:47] -rwxr-xr-x 1 boincer umatlas      7986 Jan 27 01:49 run_atlas
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas       105 Jan 27 01:49 job.xml
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas 495892872 Jan 27 01:49 EVNT.48317949._000025.pool.root.1
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas     15845 Jan 27 01:49 start_atlas.sh
[2026-01-27 05:04:47] drwxrwx--x 2 boincer umatlas      4096 Jan 27 01:49 shared
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas    597751 Jan 27 01:49 input.tar.gz
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas         0 Jan 27 01:49 boinc_lockfile
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas      2519 Jan 27 01:49 pandaJob.out
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas        57 Jan 27 01:49 setup.sh.local
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas   1004335 Jan 27 01:49 agis_schedconf.cvmfs.json
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas       444 Jan 27 01:49 workernode_map.json
[2026-01-27 05:04:47] drwx------ 5 boincer umatlas      4096 Jan 27 01:49 pilot3
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas 186708485 Jan 27 05:03 HITS.48317952._001269.pool.root.1
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas       531 Jan 27 05:03 boinc_task_state.xml
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas      1054 Jan 27 05:03 memory_monitor_summary.json
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas   1516246 Jan 27 05:03 agis_ddmendpoints.agis.ALL.json
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas    467000 Jan 27 05:03 log.48317952._001269.job.log.tgz.1
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas      6423 Jan 27 05:03 heartbeat.json
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas      5951 Jan 27 05:04 init_data.xml
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas        95 Jan 27 05:04 pilot_heartbeat.json
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas      8192 Jan 27 05:04 boinc_mmap_file
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas        28 Jan 27 05:04 wrapper_checkpoint.txt
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas      5003 Jan 27 05:04 pilotlog.txt
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas   1656791 Jan 27 05:04 log.48317952._001269.job.log.1
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas       357 Jan 27 05:04 output.list
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas       620 Jan 27 05:04 runtime_log
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas   2140160 Jan 27 05:04 result.tar.gz
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas       659 Jan 27 05:04 TbbNDmsOa48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4G3KDmZ1dJPo.diag
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas      9337 Jan 27 05:04 runtime_log.err
[2026-01-27 05:04:47] -rw-r--r-- 1 boincer umatlas     20995 Jan 27 05:04 stderr.txt
[2026-01-27 05:04:47] HITS file was successfully produced:
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas 186708485 Jan 27 05:03 shared/HITS.pool.root.1
[2026-01-27 05:04:47]  *** Contents of shared directory: ***
[2026-01-27 05:04:47] total 669308
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas 495892872 Jan 27 01:49 ATLAS.root_0
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas     15845 Jan 27 01:49 start_atlas.sh
[2026-01-27 05:04:47] -rw-r--r-- 2 boincer umatlas    597751 Jan 27 01:49 input.tar.gz
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas 186708485 Jan 27 05:03 HITS.pool.root.1
[2026-01-27 05:04:47] -rw------- 1 boincer umatlas   2140160 Jan 27 05:04 result.tar.gz
05:04:48 (18421): run_atlas exited; CPU time 87286.480568
05:04:48 (18421): called boinc_finish(0)

</stderr_txt>
]]>

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