Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:32:40 (3380061): wrapper (7.7.26015): starting
10:32:40 (3380061): wrapper: running run_atlas (--nthreads 4)
[2026-01-29 10:32:40] Arguments: --nthreads 4
[2026-01-29 10:32:40] Threads: 4
[2026-01-29 10:32:40] Checking for CVMFS
[2026-01-29 10:32:40] No cvmfs_config command found, will try listing directly
[2026-01-29 10:32:40] CVMFS is ok
[2026-01-29 10:32:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 10:32:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 10:32:40] Further information can be found at the LHC@home message board.
[2026-01-29 10:32:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 10:32:40] Checking for apptainer binary...
[2026-01-29 10:32:40] which: no apptainer in ((null))
[2026-01-29 10:32:40] apptainer is not installed, using version from CVMFS
[2026-01-29 10:32:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 10:32:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-29 10:32:41] apptainer works
[2026-01-29 10:32:41] Set ATHENA_PROC_NUMBER=4
[2026-01-29 10:32:41] Set ATHENA_CORE_NUMBER=4
[2026-01-29 10:32:41] Starting ATLAS job with PandaID=6984062832
[2026-01-29 10:32:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 13:08:22]  *** The last 200 lines of the pilot log: ***
[2026-01-29 13:08:22] 2026-01-29 12:07:32,016 | INFO     | extracted standard info from prmon json
[2026-01-29 13:08:22] 2026-01-29 12:07:32,017 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 13:08:22] 2026-01-29 12:07:32,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 13:08:22] 2026-01-29 12:07:32,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 13:08:22] 2026-01-29 12:07:32,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 13:08:22] 2026-01-29 12:07:32,020 | INFO     | fitting pss+swap vs Time
[2026-01-29 13:08:22] 2026-01-29 12:07:32,021 | INFO     | sum of square deviations: 1088905998.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,021 | INFO     | sum of deviations: 4502897359.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,022 | INFO     | mean x: 1769683816.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,022 | INFO     | mean y: 2298148.4671052634
[2026-01-29 13:08:22] 2026-01-29 12:07:32,022 | INFO     | intersect: -7315784954.302003
[2026-01-29 13:08:22] 2026-01-29 12:07:32,022 | INFO     | chi2: 2.0760184573536007
[2026-01-29 13:08:22] 2026-01-29 12:07:32,022 | INFO     | sum of square deviations: 984941258.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,023 | INFO     | sum of deviations: 13343187214.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,023 | INFO     | mean x: 1769683664.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,023 | INFO     | mean y: 2310751.170068027
[2026-01-29 13:08:22] 2026-01-29 12:07:32,024 | INFO     | intersect: -23971931617.61643
[2026-01-29 13:08:22] 2026-01-29 12:07:32,024 | INFO     | chi2: 1.311230681658025
[2026-01-29 13:08:22] 2026-01-29 12:07:32,024 | INFO     | current chi2=1.311230681658025 (change=36.839160701417214 %)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,024 | INFO     | sum of square deviations: 887813855.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,025 | INFO     | sum of deviations: 12687124497.500002
[2026-01-29 13:08:22] 2026-01-29 12:07:32,025 | INFO     | mean x: 1769683511.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,025 | INFO     | mean y: 2309720.8098591547
[2026-01-29 13:08:22] 2026-01-29 12:07:32,025 | INFO     | intersect: -25286994892.406414
[2026-01-29 13:08:22] 2026-01-29 12:07:32,025 | INFO     | chi2: 1.3126496643055907
[2026-01-29 13:08:22] 2026-01-29 12:07:32,026 | INFO     | current chi2=1.3126496643055907 (change=-0.1082176208515351 %)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,026 | INFO     | right removable region: 141
[2026-01-29 13:08:22] 2026-01-29 12:07:32,026 | INFO     | sum of square deviations: 984941258.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | sum of deviations: -13077925968.999998
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | mean x: 1769683969.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | mean y: 2323445.0272108843
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | intersect: 23499964291.247185
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | chi2: 0.8138301419817078
[2026-01-29 13:08:22] 2026-01-29 12:07:32,027 | INFO     | current chi2=0.8138301419817078 (change=60.79851125123734 %)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,028 | INFO     | sum of square deviations: 887813855.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,028 | INFO     | sum of deviations: -10824802885.000002
[2026-01-29 13:08:22] 2026-01-29 12:07:32,028 | INFO     | mean x: 1769684121.5
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | mean y: 2319899.3943661973
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | intersect: 21579457567.69909
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | chi2: 0.8097930733963148
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | current chi2=0.8097930733963148 (change=0.4960578844576303 %)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | left removable region: 20
[2026-01-29 13:08:22] 2026-01-29 12:07:32,029 | INFO     | sum of square deviations: 549294020.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,030 | INFO     | sum of deviations: 894150993.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,030 | INFO     | mean x: 1769684091.0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,030 | INFO     | mean y: 2327677.644628099
[2026-01-29 13:08:22] 2026-01-29 12:07:32,030 | INFO     | intersect: -2878396906.3658667
[2026-01-29 13:08:22] 2026-01-29 12:07:32,030 | INFO     | chi2: 0.00023914229936347357
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | current memory leak: 1.63 B/s (using 121 data points, chi2=0.00)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | could have reported an average CPU frequency of 2734 MHz (9 samples)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | ..............................
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | . Timing measurements:
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | . get job = 0 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,031 | INFO     | . initial setup = 8 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | . payload setup = 9 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | . stage-in = 0 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | . payload execution = 9239 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | . stage-out = 0 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | . log creation = 0 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,032 | INFO     | ..............................
[2026-01-29 13:08:22] 2026-01-29 12:07:32,131 | INFO     | 
[2026-01-29 13:08:22] 2026-01-29 12:07:32,131 | INFO     | job summary report
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | --------------------------------------------------
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | PanDA job id: 6984062832
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | task id: 48317872
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | errors: (none)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | pilot state: finished 
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | transexitcode: 0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | exeerrorcode: 0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | exeerrordiag: 
[2026-01-29 13:08:22] 2026-01-29 12:07:32,132 | INFO     | exitcode: 0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | exitmsg: OK
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | cpuconsumptiontime: 35896 s
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | nevents: 400
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | neventsw: 0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | pid: 3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | pgrp: 3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | corecount: 4
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | event service: False
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | sizes: {0: 2283981, 1: 2284271, 11: 2284271, 9252: 2312931, 9253: 2312930, 9254: 2322006, 9257: 2322190, 9258: 2322448}
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | --------------------------------------------------
[2026-01-29 13:08:22] 2026-01-29 12:07:32,133 | INFO     | 
[2026-01-29 13:08:22] 2026-01-29 12:07:32,134 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2026-01-29 13:08:22] 2026-01-29 12:07:32,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | job 6984062832 has completed (purged errors)
[2026-01-29 13:08:22] 2026-01-29 12:07:32,170 | INFO     | overall cleanup function is called
[2026-01-29 13:08:22] 2026-01-29 12:07:32,952 | WARNING  | process 3389986 can no longer be monitored (due to stat problems) - aborting
[2026-01-29 13:08:22] 2026-01-29 12:07:33,180 | INFO     | --- collectZombieJob: --- 10, [3389986]
[2026-01-29 13:08:22] 2026-01-29 12:07:33,180 | INFO     | zombie collector waiting for pid 3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:33,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 13:08:22] 2026-01-29 12:07:33,181 | INFO     | collected zombie processes
[2026-01-29 13:08:22] 2026-01-29 12:07:33,181 | INFO     | will attempt to kill all subprocesses of pid=3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:34,339 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 13:08:22] 2026-01-29 12:07:35,680 | INFO     | process IDs to be killed: [3389986] (in reverse order)
[2026-01-29 13:08:22] 2026-01-29 12:07:35,955 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 13:08:22] 2026-01-29 12:07:35,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 13:08:22] 2026-01-29 12:07:36,015 | INFO     | number of running child processes to parent process 3389986: 1
[2026-01-29 13:08:22] 2026-01-29 12:07:36,015 | INFO     | maximum number of monitored processes: 6
[2026-01-29 13:08:22] 2026-01-29 12:07:36,015 | INFO     | aborting job monitoring since job object (job id=6984062832) has expired
[2026-01-29 13:08:22] 2026-01-29 12:07:36,024 | INFO     | did not find any defunct processes belonging to 3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:36,056 | INFO     | did not find any defunct processes belonging to 3389986
[2026-01-29 13:08:22] 2026-01-29 12:07:36,057 | INFO     | ready for new job
[2026-01-29 13:08:22] 2026-01-29 12:07:36,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 13:08:22] 2026-01-29 12:07:36,059 | INFO     | **************************************
[2026-01-29 13:08:22] 2026-01-29 12:07:36,059 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 13:08:22] 2026-01-29 12:07:36,059 | INFO     | **************************************
[2026-01-29 13:08:22] 2026-01-29 12:07:36,059 | INFO     | 
[2026-01-29 13:08:22] 2026-01-29 12:07:36,069 | INFO     | architecture information:
[2026-01-29 13:08:22] 2026-01-29 12:07:36,069 | INFO     | executing command: cat /etc/os-release
[2026-01-29 13:08:22] 2026-01-29 12:07:36,094 | INFO     | cat /etc/os-release:
[2026-01-29 13:08:22] NAME="CentOS Linux"
[2026-01-29 13:08:22] VERSION="7 (Core)"
[2026-01-29 13:08:22] ID="centos"
[2026-01-29 13:08:22] ID_LIKE="rhel fedora"
[2026-01-29 13:08:22] VERSION_ID="7"
[2026-01-29 13:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 13:08:22] ANSI_COLOR="0;31"
[2026-01-29 13:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 13:08:22] HOME_URL="https://www.centos.org/"
[2026-01-29 13:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 13:08:22] 
[2026-01-29 13:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 13:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 13:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 13:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 13:08:22] 
[2026-01-29 13:08:22] 2026-01-29 12:07:36,094 | INFO     | **************************************
[2026-01-29 13:08:22] 2026-01-29 12:07:36,596 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2026-01-29 13:08:22] 2026-01-29 12:07:36,621 | INFO     | sufficient remaining disk space (3291627913216 B)
[2026-01-29 13:08:22] 2026-01-29 12:07:36,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 13:08:22] 2026-01-29 12:07:36,622 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 13:08:22] 2026-01-29 12:07:36,622 | INFO     | update_server=False
[2026-01-29 13:08:22] 2026-01-29 12:07:36,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 13:08:22] 2026-01-29 12:07:36,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 13:08:22] 2026-01-29 12:07:36,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 13:08:22] 2026-01-29 12:07:36,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 13:08:22] 2026-01-29 12:07:36,624 | INFO     | will abort loop
[2026-01-29 13:08:22] 2026-01-29 12:07:37,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 13:08:22] 2026-01-29 12:07:37,628 | INFO     | [job] retrieve thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:37,630 | INFO     | [job] job monitor thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:37,657 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:37,659 | INFO     | all data control threads have been joined
[2026-01-29 13:08:22] 2026-01-29 12:07:37,764 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:37,850 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:37,910 | INFO     | all job control threads have been joined
[2026-01-29 13:08:22] 2026-01-29 12:07:38,010 | INFO     | all payload control threads have been joined
[2026-01-29 13:08:22] 2026-01-29 12:07:38,147 | INFO     | [job] queue monitor thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,177 | INFO     | [data] copytool_in thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,256 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,576 | INFO     | [job] validate thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,630 | INFO     | [data] copytool_out thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,646 | INFO     | [payload] validate_post thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,662 | INFO     | [data] control thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,771 | INFO     | [payload] failed_post thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:38,916 | INFO     | [job] control thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:39,016 | INFO     | [payload] control thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:07:40,627 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 13:08:22] 2026-01-29 12:08:05,780 | INFO     | PID=3384259 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-29 13:08:22] 2026-01-29 12:08:05,781 | INFO     | .. there are 9 such processes running
[2026-01-29 13:08:22] 2026-01-29 12:08:05,782 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 13:08:22] 2026-01-29 12:08:05,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 13:08:22] 2026-01-29 12:08:05,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 13:08:22] 2026-01-29 12:08:17,082 | INFO     | [monitor] cgroup control has ended
[2026-01-29 13:08:22] 2026-01-29 12:08:17,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23426148972352)>', '<ExcThread(monitor, started 23425910585088)>']
[2026-01-29 13:08:22] 2026-01-29 12:08:17,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 13:08:22] 2026-01-29 12:08:17,844 | INFO     | [monitor] control thread has ended
[2026-01-29 13:08:22] 2026-01-29 12:08:22,265 | INFO     | all workflow threads have been joined
[2026-01-29 13:08:22] 2026-01-29 12:08:22,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 13:08:22] 2026-01-29 12:08:22,268 | INFO     | traces error code: 0
[2026-01-29 13:08:22] 2026-01-29 12:08:22,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 13:08:22] 2026-01-29 12:08:22,434 [wrapper] ==== pilot stdout END ====
[2026-01-29 13:08:22] 2026-01-29 12:08:22,437 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 13:08:22] 2026-01-29 12:08:22,441 [wrapper] pilotpid: 3384259
[2026-01-29 13:08:22] 2026-01-29 12:08:22,445 [wrapper] Pilot exit status: 0
[2026-01-29 13:08:22] 2026-01-29 12:08:22,458 [wrapper] pandaids: 6984062832
[2026-01-29 13:08:22] 2026-01-29 12:08:22,628 [wrapper] cleanup supervisor_pilot 3563462 3384260
[2026-01-29 13:08:22] 2026-01-29 12:08:22,633 [wrapper] Test setup, not cleaning
[2026-01-29 13:08:22] 2026-01-29 12:08:22,636 [wrapper] apfmon messages muted
[2026-01-29 13:08:22] 2026-01-29 12:08:22,639 [wrapper] ==== wrapper stdout END ====
[2026-01-29 13:08:22] 2026-01-29 12:08:22,642 [wrapper] ==== wrapper stderr END ====
[2026-01-29 13:08:22]  *** Error codes and diagnostics ***
[2026-01-29 13:08:22]     "exeErrorCode": 0,
[2026-01-29 13:08:22]     "exeErrorDiag": "",
[2026-01-29 13:08:22]     "pilotErrorCode": 0,
[2026-01-29 13:08:22]     "pilotErrorDiag": "",
[2026-01-29 13:08:22]  *** Listing of results directory ***
[2026-01-29 13:08:22] total 1023636
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-29 13:08:22] -rwx------ 1 boinc boinc     36322 Jan 26 08:39 runpilot2-wrapper.sh
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc       100 Jan 27 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 13:08:22] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 01:23 run_atlas
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc       105 Jan 27 01:23 job.xml
[2026-01-29 13:08:22] -rw------- 2 boinc boinc 343146496 Jan 27 02:51 copy_Fmxbyq
[2026-01-29 13:08:22] -rw------- 2 boinc boinc  11337728 Jan 28 05:11 copy_Qv3BDc
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc      6688 Jan 29 10:32 init_data.xml
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc 500957214 Jan 29 10:32 EVNT.48317869._000063.pool.root.1
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc     15845 Jan 29 10:32 start_atlas.sh
[2026-01-29 13:08:22] drwxrwx--x 2 boinc boinc      4096 Jan 29 10:32 shared
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc    597754 Jan 29 10:32 input.tar.gz
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc         0 Jan 29 10:32 boinc_lockfile
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc      2514 Jan 29 10:32 pandaJob.out
[2026-01-29 13:08:22] -rw------- 1 boinc boinc   1005730 Jan 29 10:32 agis_schedconf.cvmfs.json
[2026-01-29 13:08:22] -rw------- 1 boinc boinc   1516246 Jan 29 10:32 agis_ddmendpoints.agis.ALL.json
[2026-01-29 13:08:22] -rw------- 1 boinc boinc       443 Jan 29 10:33 workernode_map.json
[2026-01-29 13:08:22] drwx------ 5 boinc boinc      4096 Jan 29 10:33 pilot3
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc       529 Jan 29 13:06 boinc_task_state.xml
[2026-01-29 13:08:22] -rw------- 1 boinc boinc 185534300 Jan 29 13:06 HITS.48317872._003135.pool.root.1
[2026-01-29 13:08:22] -rw------- 1 boinc boinc      1039 Jan 29 13:07 memory_monitor_summary.json
[2026-01-29 13:08:22] -rw------- 1 boinc boinc    338981 Jan 29 13:07 log.48317872._003135.job.log.tgz.1
[2026-01-29 13:08:22] -rw------- 1 boinc boinc      6342 Jan 29 13:07 heartbeat.json
[2026-01-29 13:08:22] -rw------- 1 boinc boinc        95 Jan 29 13:08 pilot_heartbeat.json
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc        27 Jan 29 13:08 wrapper_checkpoint.txt
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc      8192 Jan 29 13:08 boinc_mmap_file
[2026-01-29 13:08:22] -rw------- 1 boinc boinc      4833 Jan 29 13:08 pilotlog.txt
[2026-01-29 13:08:22] -rw------- 1 boinc boinc   1302333 Jan 29 13:08 log.48317872._003135.job.log.1
[2026-01-29 13:08:22] -rw------- 1 boinc boinc       357 Jan 29 13:08 output.list
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc       620 Jan 29 13:08 runtime_log
[2026-01-29 13:08:22] -rw------- 1 boinc boinc   1658880 Jan 29 13:08 result.tar.gz
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc      9204 Jan 29 13:08 runtime_log.err
[2026-01-29 13:08:22] -rw------- 1 boinc boinc       662 Jan 29 13:08 bWkMDmqMW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOK9KDmyX8Gtn.diag
[2026-01-29 13:08:22] -rw-r--r-- 1 boinc boinc     20874 Jan 29 13:08 stderr.txt
[2026-01-29 13:08:22] HITS file was successfully produced:
[2026-01-29 13:08:22] -rw------- 1 boinc boinc 185534300 Jan 29 13:06 shared/HITS.pool.root.1
[2026-01-29 13:08:22]  *** Contents of shared directory: ***
[2026-01-29 13:08:22] total 1018816
[2026-01-29 13:08:22] -rw------- 2 boinc boinc 343146496 Jan 27 02:51 copy_Fmxbyq
[2026-01-29 13:08:22] -rw------- 2 boinc boinc  11337728 Jan 28 05:11 copy_Qv3BDc
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc 500957214 Jan 29 10:32 ATLAS.root_0
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc     15845 Jan 29 10:32 start_atlas.sh
[2026-01-29 13:08:22] -rw-r--r-- 2 boinc boinc    597754 Jan 29 10:32 input.tar.gz
[2026-01-29 13:08:22] -rw------- 1 boinc boinc 185534300 Jan 29 13:06 HITS.pool.root.1
[2026-01-29 13:08:22] -rw------- 1 boinc boinc   1658880 Jan 29 13:08 result.tar.gz
13:08:24 (3380061): run_atlas exited; CPU time 36563.614262
13:08:24 (3380061): called boinc_finish(0)

</stderr_txt>
]]>

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